RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 EMP3P54852 163 aa12.58□□□□□ -0.4
USO1-202ENST00000508454 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
USO1-202ENST00000508454 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
USO1-202ENST00000508454 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
USO1-202ENST00000508454 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
USO1-202ENST00000508454 HS3ST6Q96QI5 342 aa12.54□□□□□ -0.4
USO1-202ENST00000508454 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
USO1-202ENST00000508454 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
USO1-202ENST00000508454 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
USO1-202ENST00000508454 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
USO1-202ENST00000508454 ZNF710Q8N1W2 664 aa12.5□□□□□ -0.41
USO1-202ENST00000508454 KRTAP3-3Q9BYR6 98 aa12.48□□□□□ -0.41
USO1-202ENST00000508454 KRTAP3-2Q9BYR7 98 aa12.48□□□□□ -0.41
USO1-202ENST00000508454 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
USO1-202ENST00000508454 RIMBP2O15034 1052 aa12.42□□□□□ -0.42
USO1-202ENST00000508454 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
USO1-202ENST00000508454 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
USO1-202ENST00000508454 SPNS2Q8IVW8 549 aa12.4□□□□□ -0.42
USO1-202ENST00000508454 ERBB3P21860 1342 aa12.37□□□□□ -0.43
USO1-202ENST00000508454 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
USO1-202ENST00000508454 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
USO1-202ENST00000508454 SLC34A2O95436 690 aa12.35□□□□□ -0.43
USO1-202ENST00000508454 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.44
USO1-202ENST00000508454 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
USO1-202ENST00000508454 FOXK1P85037 733 aa12.3□□□□□ -0.44
USO1-202ENST00000508454 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
USO1-202ENST00000508454 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
USO1-202ENST00000508454 NUDT7P0C024 238 aa12.29□□□□□ -0.44
USO1-202ENST00000508454 DSG2Q14126 1118 aa12.29□□□□□ -0.44
USO1-202ENST00000508454 ZNF316A6NFI3 1004 aaPredicted RBP12.28□□□□□ -0.44
USO1-202ENST00000508454 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
USO1-202ENST00000508454 ZNF687Q8N1G0 1237 aa12.27□□□□□ -0.45
USO1-202ENST00000508454 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
USO1-202ENST00000508454 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
USO1-202ENST00000508454 NCKAP5LQ9HCH0 1330 aa12.24□□□□□ -0.45
USO1-202ENST00000508454 DCAF8L2P0C7V8 631 aa12.23□□□□□ -0.45
USO1-202ENST00000508454 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
USO1-202ENST00000508454 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
USO1-202ENST00000508454 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
USO1-202ENST00000508454 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
USO1-202ENST00000508454 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
USO1-202ENST00000508454 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
USO1-202ENST00000508454 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
USO1-202ENST00000508454 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
USO1-202ENST00000508454 LSM11P83369 360 aaKnown RBP eCLIP12.09□□□□□ -0.47
USO1-202ENST00000508454 AXIN2Q9Y2T1 843 aa12.09□□□□□ -0.47
USO1-202ENST00000508454 PDE4AP27815 886 aa12.08□□□□□ -0.48
USO1-202ENST00000508454 MFSD10Q14728 455 aa12.08□□□□□ -0.48
USO1-202ENST00000508454 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
USO1-202ENST00000508454 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
USO1-202ENST00000508454 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
USO1-202ENST00000508454 PBX2P40425 430 aa12.05□□□□□ -0.48
USO1-202ENST00000508454 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
USO1-202ENST00000508454 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
USO1-202ENST00000508454 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
USO1-202ENST00000508454 TBC1D12O60347 775 aa12.01□□□□□ -0.49
USO1-202ENST00000508454 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
USO1-202ENST00000508454 PSDA5PKW4 1024 aaPredicted RBP12□□□□□ -0.49
USO1-202ENST00000508454 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
USO1-202ENST00000508454 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
USO1-202ENST00000508454 PSEN2P49810 448 aa11.98□□□□□ -0.49
USO1-202ENST00000508454 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
USO1-202ENST00000508454 ARHGAP33O14559 1287 aa11.97□□□□□ -0.49
USO1-202ENST00000508454 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
USO1-202ENST00000508454 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
USO1-202ENST00000508454 PTGER2P43116 358 aa11.94□□□□□ -0.5
USO1-202ENST00000508454 FOSBP53539 338 aa11.93□□□□□ -0.5
USO1-202ENST00000508454 EVI5O60447 810 aa11.92□□□□□ -0.5
USO1-202ENST00000508454 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
USO1-202ENST00000508454 CAMK2BQ13554 666 aa11.91□□□□□ -0.5
USO1-202ENST00000508454 ZNF454Q8N9F8 522 aa11.91□□□□□ -0.5
USO1-202ENST00000508454 HRO43593 1189 aa11.89□□□□□ -0.51
USO1-202ENST00000508454 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
USO1-202ENST00000508454 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
USO1-202ENST00000508454 TK2O00142 265 aa11.87□□□□□ -0.51
USO1-202ENST00000508454 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
USO1-202ENST00000508454 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
USO1-202ENST00000508454 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
USO1-202ENST00000508454 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
USO1-202ENST00000508454 PCDHGA10Q9Y5H3 936 aa11.82□□□□□ -0.52
USO1-202ENST00000508454 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
USO1-202ENST00000508454 VPS9D1Q9Y2B5 631 aa11.81□□□□□ -0.52
USO1-202ENST00000508454 DPYSL4O14531 572 aa11.8□□□□□ -0.52
USO1-202ENST00000508454 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
USO1-202ENST00000508454 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
USO1-202ENST00000508454 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
USO1-202ENST00000508454 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
USO1-202ENST00000508454 SLC4A5Q9BY07 1137 aa11.77□□□□□ -0.53
USO1-202ENST00000508454 PTPREP23469 700 aa11.76□□□□□ -0.53
USO1-202ENST00000508454 BHMG1C9JSJ3 638 aaPredicted RBP11.74□□□□□ -0.53
USO1-202ENST00000508454 PHF14O94880 888 aa11.73□□□□□ -0.53
USO1-202ENST00000508454 COL9A1P20849 921 aa11.72□□□□□ -0.53
USO1-202ENST00000508454 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
USO1-202ENST00000508454 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
USO1-202ENST00000508454 PDIA6Q15084 440 aa11.69□□□□□ -0.54
USO1-202ENST00000508454 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
USO1-202ENST00000508454 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
USO1-202ENST00000508454 PROX2Q3B8N5 592 aa11.66□□□□□ -0.54
USO1-202ENST00000508454 DDX12PQ92771 950 aa11.66□□□□□ -0.54
USO1-202ENST00000508454 KCTD12Q96CX2 325 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms