RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
HTT-204ENST00000508321 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
HTT-204ENST00000508321 FANCAO15360 1455 aa15.96■□□□□ 0.14
HTT-204ENST00000508321 GPATCH8Q9UKJ3 1502 aaKnown RBP15.95■□□□□ 0.14
HTT-204ENST00000508321 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
HTT-204ENST00000508321 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
HTT-204ENST00000508321 MIA2Q96PC5 1412 aa15.93■□□□□ 0.14
HTT-204ENST00000508321 PLEKHH2Q8IVE3 1493 aa15.92■□□□□ 0.14
HTT-204ENST00000508321 ABCC1P33527 1531 aa15.92■□□□□ 0.14
HTT-204ENST00000508321 SAMD9LQ8IVG5 1584 aa15.9■□□□□ 0.14
HTT-204ENST00000508321 KDM6BO15054 1643 aa15.9■□□□□ 0.14
HTT-204ENST00000508321 ADGRL1O94910 1474 aa15.89■□□□□ 0.13
HTT-204ENST00000508321 AKNAQ7Z591 1439 aa15.88■□□□□ 0.13
HTT-204ENST00000508321 EFCAB2Q5VUJ9 269 aa15.88■□□□□ 0.13
HTT-204ENST00000508321 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
HTT-204ENST00000508321 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
HTT-204ENST00000508321 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
HTT-204ENST00000508321 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
HTT-204ENST00000508321 RICTORQ6R327 1708 aa15.86■□□□□ 0.13
HTT-204ENST00000508321 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
HTT-204ENST00000508321 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
HTT-204ENST00000508321 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
HTT-204ENST00000508321 ARHGEF5Q12774 1597 aa15.84■□□□□ 0.13
HTT-204ENST00000508321 POGZQ7Z3K3 1410 aa15.84■□□□□ 0.13
HTT-204ENST00000508321 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
HTT-204ENST00000508321 ZMYM4Q5VZL5 1548 aa15.84■□□□□ 0.13
HTT-204ENST00000508321 FRMPD1Q5SYB0 1578 aa15.83■□□□□ 0.13
HTT-204ENST00000508321 DENND4BO75064 1496 aaPredicted RBP15.83■□□□□ 0.12
HTT-204ENST00000508321 KDM5CP41229 1560 aa15.83■□□□□ 0.12
HTT-204ENST00000508321 CROCC2H7BZ55 1655 aa15.81■□□□□ 0.12
HTT-204ENST00000508321 SCAPERQ9BY12 1400 aa15.8■□□□□ 0.12
HTT-204ENST00000508321 CCDC141Q6ZP82 1450 aa15.79■□□□□ 0.12
HTT-204ENST00000508321 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
HTT-204ENST00000508321 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
HTT-204ENST00000508321 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
HTT-204ENST00000508321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.78■□□□□ 0.12
HTT-204ENST00000508321 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
HTT-204ENST00000508321 MAGI2Q86UL8 1455 aa15.78■□□□□ 0.12
HTT-204ENST00000508321 MBD5Q9P267 1494 aa15.77■□□□□ 0.11
HTT-204ENST00000508321 SHANK2Q9UPX8 1470 aa15.77■□□□□ 0.11
HTT-204ENST00000508321 INO80Q9ULG1 1556 aaPredicted RBP15.76■□□□□ 0.11
HTT-204ENST00000508321 MAST1Q9Y2H9 1570 aa15.76■□□□□ 0.11
HTT-204ENST00000508321 ARHGEF40Q8TER5 1519 aa15.76■□□□□ 0.11
HTT-204ENST00000508321 COL17A1Q9UMD9 1497 aaPredicted RBP15.76■□□□□ 0.11
HTT-204ENST00000508321 RSPH4AQ5TD94 716 aa15.75■□□□□ 0.11
HTT-204ENST00000508321 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
HTT-204ENST00000508321 ZFYVE16Q7Z3T8 1539 aa15.74■□□□□ 0.11
HTT-204ENST00000508321 MLH3Q9UHC1 1453 aa15.73■□□□□ 0.11
HTT-204ENST00000508321 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
HTT-204ENST00000508321 PLXNC1O60486 1568 aa15.72■□□□□ 0.11
HTT-204ENST00000508321 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
HTT-204ENST00000508321 ATP7AQ04656 1500 aa15.72■□□□□ 0.11
HTT-204ENST00000508321 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
HTT-204ENST00000508321 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
HTT-204ENST00000508321 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
HTT-204ENST00000508321 DAPK1P53355 1430 aa15.7■□□□□ 0.1
HTT-204ENST00000508321 KIDINS220Q9ULH0 1771 aa15.7■□□□□ 0.1
HTT-204ENST00000508321 REREQ9P2R6 1566 aa15.7■□□□□ 0.1
HTT-204ENST00000508321 ABCA6Q8N139 1617 aa15.68■□□□□ 0.1
HTT-204ENST00000508321 DIP2CQ9Y2E4 1556 aa15.68■□□□□ 0.1
HTT-204ENST00000508321 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
HTT-204ENST00000508321 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
HTT-204ENST00000508321 ABCC5O15440 1437 aa15.67■□□□□ 0.1
HTT-204ENST00000508321 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.1
HTT-204ENST00000508321 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
HTT-204ENST00000508321 ADGRL2O95490 1459 aa15.65■□□□□ 0.1
HTT-204ENST00000508321 KDM4FA0A1W2PPD8 638 aa15.65■□□□□ 0.1
HTT-204ENST00000508321 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
HTT-204ENST00000508321 AFAP1Q8N556 730 aa15.64■□□□□ 0.09
HTT-204ENST00000508321 TSPY4P0CV99 314 aa15.63■□□□□ 0.09
HTT-204ENST00000508321 TSPY10P0CW01 314 aa15.63■□□□□ 0.09
HTT-204ENST00000508321 BCORL1Q5H9F3 1711 aa15.62■□□□□ 0.09
HTT-204ENST00000508321 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
HTT-204ENST00000508321 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
HTT-204ENST00000508321 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
HTT-204ENST00000508321 ATP10AO60312 1499 aa15.61■□□□□ 0.09
HTT-204ENST00000508321 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
HTT-204ENST00000508321 ANKRD30AQ9BXX3 1397 aa15.6■□□□□ 0.09
HTT-204ENST00000508321 AGLP35573 1532 aa15.59■□□□□ 0.09
HTT-204ENST00000508321 GCC2Q8IWJ2 1684 aa15.59■□□□□ 0.09
HTT-204ENST00000508321 A2MP01023 1474 aa15.58■□□□□ 0.08
HTT-204ENST00000508321 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
HTT-204ENST00000508321 MYT1LQ9UL68 1186 aa15.56■□□□□ 0.08
HTT-204ENST00000508321 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
HTT-204ENST00000508321 FAM135AQ9P2D6 1515 aa15.55■□□□□ 0.08
HTT-204ENST00000508321 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
HTT-204ENST00000508321 KIF15Q9NS87 1388 aa15.55■□□□□ 0.08
HTT-204ENST00000508321 SIGLEC1Q9BZZ2 1709 aa15.54■□□□□ 0.08
HTT-204ENST00000508321 RNF17Q9BXT8 1623 aaKnown RBP15.54■□□□□ 0.08
HTT-204ENST00000508321 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.08
HTT-204ENST00000508321 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
HTT-204ENST00000508321 DEPDC5O75140 1603 aa15.51■□□□□ 0.07
HTT-204ENST00000508321 PRDM15P57071 1507 aaPredicted RBP15.49■□□□□ 0.07
HTT-204ENST00000508321 ZC3H13Q5T200 1668 aaKnown RBP15.49■□□□□ 0.07
HTT-204ENST00000508321 ANKRD50Q9ULJ7 1429 aa15.49■□□□□ 0.07
HTT-204ENST00000508321 UNC13BO14795 1591 aa15.48■□□□□ 0.07
HTT-204ENST00000508321 FER1L4A9Z1Z3 1794 aa15.47■□□□□ 0.07
HTT-204ENST00000508321 NAIPQ13075 1403 aa15.46■□□□□ 0.07
HTT-204ENST00000508321 ITGAEP38570 1179 aa15.46■□□□□ 0.07
HTT-204ENST00000508321 CHIC2Q9UKJ5 165 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms