RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 FBXO22Q8NEZ5 403 aa15.05■□□□□ -0
TRAPPC13-209ENST00000508304 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
TRAPPC13-209ENST00000508304 STK24Q9Y6E0 443 aa15.03■□□□□ -0
TRAPPC13-209ENST00000508304 RIMBP2O15034 1052 aa15.02■□□□□ -0
TRAPPC13-209ENST00000508304 MFRPQ9BY79 579 aa14.99□□□□□ -0.01
TRAPPC13-209ENST00000508304 ZSWIM6Q9HCJ5 1215 aa14.99□□□□□ -0.01
TRAPPC13-209ENST00000508304 STK25O00506 426 aa14.98□□□□□ -0.01
TRAPPC13-209ENST00000508304 PKD2Q13563 968 aa14.98□□□□□ -0.01
TRAPPC13-209ENST00000508304 ERBB3P21860 1342 aa14.97□□□□□ -0.01
TRAPPC13-209ENST00000508304 RGL2O15211 777 aa14.93□□□□□ -0.02
TRAPPC13-209ENST00000508304 GPR153Q6NV75 609 aa14.93□□□□□ -0.02
TRAPPC13-209ENST00000508304 VARS2Q5ST30 1063 aaKnown RBP14.89□□□□□ -0.03
TRAPPC13-209ENST00000508304 KIF3CO14782 793 aa14.85□□□□□ -0.03
TRAPPC13-209ENST00000508304 ARSIQ5FYB1 569 aa14.82□□□□□ -0.04
TRAPPC13-209ENST00000508304 ZNF687Q8N1G0 1237 aa14.81□□□□□ -0.04
TRAPPC13-209ENST00000508304 C2orf72A6NCS6 295 aa14.79□□□□□ -0.04
TRAPPC13-209ENST00000508304 KHSRPQ92945 711 aaKnown RBP eCLIP14.76□□□□□ -0.055e-6■■■□□ 15.3
TRAPPC13-209ENST00000508304 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC13-209ENST00000508304 PPP1R37O75864 691 aa14.71□□□□□ -0.05
TRAPPC13-209ENST00000508304 SLC34A2O95436 690 aa14.69□□□□□ -0.06
TRAPPC13-209ENST00000508304 TMC2Q8TDI7 906 aa14.67□□□□□ -0.06
TRAPPC13-209ENST00000508304 RNF166Q96A37 237 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC13-209ENST00000508304 NUDT7P0C024 238 aa14.64□□□□□ -0.07
TRAPPC13-209ENST00000508304 HS6ST3Q8IZP7 471 aa14.64□□□□□ -0.07
TRAPPC13-209ENST00000508304 PCDHGA4Q9Y5G9 962 aa14.63□□□□□ -0.07
TRAPPC13-209ENST00000508304 MYT1LQ9UL68 1186 aa14.62□□□□□ -0.07
TRAPPC13-209ENST00000508304 PTGER2P43116 358 aa14.58□□□□□ -0.08
TRAPPC13-209ENST00000508304 LHX6Q9UPM6 363 aa14.58□□□□□ -0.08
TRAPPC13-209ENST00000508304 ANKRD13DQ6ZTN6 518 aa14.56□□□□□ -0.08
TRAPPC13-209ENST00000508304 LSM11P83369 360 aaKnown RBP eCLIP14.55□□□□□ -0.08
TRAPPC13-209ENST00000508304 PBX2P40425 430 aa14.53□□□□□ -0.08
TRAPPC13-209ENST00000508304 POTEEQ6S8J3 1075 aa14.52□□□□□ -0.09
TRAPPC13-209ENST00000508304 FOXK1P85037 733 aa14.51□□□□□ -0.09
TRAPPC13-209ENST00000508304 KDM4FA0A1W2PPD8 638 aa14.5□□□□□ -0.09
TRAPPC13-209ENST00000508304 CHGAP10645 457 aaKnown RBP14.5□□□□□ -0.09
TRAPPC13-209ENST00000508304 PTCD2Q8WV60 388 aaKnown RBP14.5□□□□□ -0.09
TRAPPC13-209ENST00000508304 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
TRAPPC13-209ENST00000508304 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC13-209ENST00000508304 PLPP6Q8IY26 295 aa14.47□□□□□ -0.09
TRAPPC13-209ENST00000508304 AXIN2Q9Y2T1 843 aa14.46□□□□□ -0.09
TRAPPC13-209ENST00000508304 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC13-209ENST00000508304 PSDA5PKW4 1024 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC13-209ENST00000508304 DSG2Q14126 1118 aa14.43□□□□□ -0.1
TRAPPC13-209ENST00000508304 ARHGAP33O14559 1287 aa14.38□□□□□ -0.11
TRAPPC13-209ENST00000508304 RYDENQ9NUL5 291 aaKnown RBP14.36□□□□□ -0.11
TRAPPC13-209ENST00000508304 TBC1D12O60347 775 aa14.34□□□□□ -0.11
TRAPPC13-209ENST00000508304 ADGRD1Q6QNK2 874 aa14.33□□□□□ -0.12
TRAPPC13-209ENST00000508304 CRISPLD2Q9H0B8 497 aa14.32□□□□□ -0.12
TRAPPC13-209ENST00000508304 OXER1Q8TDS5 423 aa14.3□□□□□ -0.12
TRAPPC13-209ENST00000508304 PPP4R3BQ5MIZ7 849 aa14.29□□□□□ -0.12
TRAPPC13-209ENST00000508304 DMRTA1Q5VZB9 504 aa14.28□□□□□ -0.12
TRAPPC13-209ENST00000508304 TK2O00142 265 aa14.27□□□□□ -0.13
TRAPPC13-209ENST00000508304 PSEN2P49810 448 aa14.27□□□□□ -0.13
TRAPPC13-209ENST00000508304 HRO43593 1189 aa14.24□□□□□ -0.13
TRAPPC13-209ENST00000508304 PPP1R15BQ5SWA1 713 aa14.24□□□□□ -0.13
TRAPPC13-209ENST00000508304 NCKAP5LQ9HCH0 1330 aa14.23□□□□□ -0.13
TRAPPC13-209ENST00000508304 UPF1Q92900 1129 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRAPPC13-209ENST00000508304 GTPBP6O43824 516 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC13-209ENST00000508304 PDE4AP27815 886 aa14.19□□□□□ -0.14
TRAPPC13-209ENST00000508304 HCSTQ9UBK5 93 aa14.19□□□□□ -0.14
TRAPPC13-209ENST00000508304 KCNK17Q96T54 332 aa14.17□□□□□ -0.14
TRAPPC13-209ENST00000508304 ZNF454Q8N9F8 522 aa14.14□□□□□ -0.15
TRAPPC13-209ENST00000508304 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
TRAPPC13-209ENST00000508304 BCL2L12Q9HB09 334 aa14.12□□□□□ -0.15
TRAPPC13-209ENST00000508304 ANO8Q9HCE9 1232 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC13-209ENST00000508304 FOSBP53539 338 aa14.11□□□□□ -0.15
TRAPPC13-209ENST00000508304 DDX27Q96GQ7 796 aaKnown RBP14.1□□□□□ -0.15
TRAPPC13-209ENST00000508304 LARP6Q9BRS8 491 aaKnown RBP14.1□□□□□ -0.15
TRAPPC13-209ENST00000508304 PLA2G2EQ9NZK7 142 aa14.1□□□□□ -0.15
TRAPPC13-209ENST00000508304 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
TRAPPC13-209ENST00000508304 MFSD10Q14728 455 aa14.08□□□□□ -0.16
TRAPPC13-209ENST00000508304 SLC4A5Q9BY07 1137 aa14.07□□□□□ -0.16
TRAPPC13-209ENST00000508304 EVI5O60447 810 aa14.06□□□□□ -0.16
TRAPPC13-209ENST00000508304 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
TRAPPC13-209ENST00000508304 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
TRAPPC13-209ENST00000508304 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
TRAPPC13-209ENST00000508304 PTPREP23469 700 aa14.03□□□□□ -0.16
TRAPPC13-209ENST00000508304 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
TRAPPC13-209ENST00000508304 ZDHHC16Q969W1 377 aa14□□□□□ -0.17
TRAPPC13-209ENST00000508304 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
TRAPPC13-209ENST00000508304 EMILIN3Q9NT22 766 aa14□□□□□ -0.17
TRAPPC13-209ENST00000508304 BHMG1C9JSJ3 638 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC13-209ENST00000508304 MAP3K9P80192 1104 aa13.99□□□□□ -0.17
TRAPPC13-209ENST00000508304 ADAM33Q9BZ11 813 aa13.99□□□□□ -0.17
TRAPPC13-209ENST00000508304 CADPS2Q86UW7 1296 aa13.98□□□□□ -0.17
TRAPPC13-209ENST00000508304 PCDHGA10Q9Y5H3 936 aa13.91□□□□□ -0.18
TRAPPC13-209ENST00000508304 PTPN5P54829 565 aa13.9□□□□□ -0.18
TRAPPC13-209ENST00000508304 THSD4Q6ZMP0 1018 aa13.89□□□□□ -0.19
TRAPPC13-209ENST00000508304 MRPL50Q8N5N7 158 aaKnown RBP13.88□□□□□ -0.19
TRAPPC13-209ENST00000508304 PPP1R3GB7ZBB8 358 aa13.87□□□□□ -0.19
TRAPPC13-209ENST00000508304 CAMK2BQ13554 666 aa13.86□□□□□ -0.19
TRAPPC13-209ENST00000508304 GOLGA8CPA6NN73 597 aa13.85□□□□□ -0.19
TRAPPC13-209ENST00000508304 PHF14O94880 888 aa13.85□□□□□ -0.19
TRAPPC13-209ENST00000508304 WNT2BQ93097 391 aa13.85□□□□□ -0.19
TRAPPC13-209ENST00000508304 NBPF3Q9H094 633 aa13.85□□□□□ -0.19
TRAPPC13-209ENST00000508304 FBXW7Q969H0 707 aa13.84□□□□□ -0.19
TRAPPC13-209ENST00000508304 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
TRAPPC13-209ENST00000508304 COL9A1P20849 921 aa13.82□□□□□ -0.2
TRAPPC13-209ENST00000508304 PROX2Q3B8N5 592 aa13.8□□□□□ -0.2
TRAPPC13-209ENST00000508304 IFFO2Q5TF58 517 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms