RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 TRIM35Q9UPQ4 493 aa6.97□□□□□ -1.29
ATP2C1-213ENST00000508297 VGFO15240 615 aaPredicted RBP6.96□□□□□ -1.3
ATP2C1-213ENST00000508297 NUBP1P53384 320 aa6.96□□□□□ -1.3
ATP2C1-213ENST00000508297 BCL11BQ9C0K0 894 aaPredicted RBP6.96□□□□□ -1.3
ATP2C1-213ENST00000508297 STK24Q9Y6E0 443 aa6.96□□□□□ -1.3
ATP2C1-213ENST00000508297 ST18O60284 1047 aa6.95□□□□□ -1.3
ATP2C1-213ENST00000508297 PCDHB13Q9Y5F0 798 aa6.95□□□□□ -1.3
ATP2C1-213ENST00000508297 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-213ENST00000508297 PLCG2P16885 1265 aa6.94□□□□□ -1.3
ATP2C1-213ENST00000508297 DCAF8Q5TAQ9 597 aa6.94□□□□□ -1.3
ATP2C1-213ENST00000508297 ZFP91Q96JP5 570 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-213ENST00000508297 GPBP1L1Q9HC44 474 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-213ENST00000508297 SEMA3EO15041 775 aa6.93□□□□□ -1.3
ATP2C1-213ENST00000508297 SNPHO15079 494 aa6.93□□□□□ -1.3
ATP2C1-213ENST00000508297 ZMYND10O75800 440 aa6.93□□□□□ -1.3
ATP2C1-213ENST00000508297 RASEFQ8IZ41 740 aa6.93□□□□□ -1.3
ATP2C1-213ENST00000508297 ARID3CA6NKF2 412 aa6.92□□□□□ -1.3
ATP2C1-213ENST00000508297 TMEM121BQ9BXQ6 578 aaPredicted RBP6.92□□□□□ -1.3
ATP2C1-213ENST00000508297 TESPA1A2RU30 521 aaPredicted RBP6.91□□□□□ -1.3
ATP2C1-213ENST00000508297 MMRN1Q13201 1228 aa6.91□□□□□ -1.3
ATP2C1-213ENST00000508297 IL27Q8NEV9 243 aa6.91□□□□□ -1.3
ATP2C1-213ENST00000508297 RYDENQ9NUL5 291 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-213ENST00000508297 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
ATP2C1-213ENST00000508297 NECTIN2Q92692 538 aa6.9□□□□□ -1.3
ATP2C1-213ENST00000508297 ARHGEF1Q92888 912 aaKnown RBP6.88□□□□□ -1.31
ATP2C1-213ENST00000508297 TMEM106CQ9BVX2 250 aa6.88□□□□□ -1.31
ATP2C1-213ENST00000508297 MKRN3Q13064 507 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-213ENST00000508297 BARGINQ6ZT62 677 aa6.86□□□□□ -1.31
ATP2C1-213ENST00000508297 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-213ENST00000508297 CCDC9Q9Y3X0 531 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-213ENST00000508297 APBB1O00213 710 aa6.85□□□□□ -1.31
ATP2C1-213ENST00000508297 FAM212AQ96EL1 285 aa6.85□□□□□ -1.31
ATP2C1-213ENST00000508297 PDIA4P13667 645 aaKnown RBP6.84□□□□□ -1.31
ATP2C1-213ENST00000508297 IFNL1Q8IU54 200 aa6.84□□□□□ -1.31
ATP2C1-213ENST00000508297 OCEL1Q9H607 264 aa6.84□□□□□ -1.31
ATP2C1-213ENST00000508297 ZBTB7CA1YPR0 619 aa6.83□□□□□ -1.32
ATP2C1-213ENST00000508297 CHRM1P11229 460 aaPredicted RBP6.83□□□□□ -1.32
ATP2C1-213ENST00000508297 IRX5P78411 483 aaPredicted RBP6.82□□□□□ -1.32
ATP2C1-213ENST00000508297 KDM4CQ9H3R0 1056 aa6.82□□□□□ -1.32
ATP2C1-213ENST00000508297 E2F4Q16254 413 aa6.81□□□□□ -1.32
ATP2C1-213ENST00000508297 MARVELD3Q96A59 401 aa6.81□□□□□ -1.32
ATP2C1-213ENST00000508297 AK7Q96M32 723 aa6.81□□□□□ -1.32
ATP2C1-213ENST00000508297 LOC105371045A0A1W2PR82 267 aa6.8□□□□□ -1.32
ATP2C1-213ENST00000508297 PYGBP11216 843 aa6.79□□□□□ -1.32
ATP2C1-213ENST00000508297 EMP3P54852 163 aa6.79□□□□□ -1.32
ATP2C1-213ENST00000508297 C3orf67Q6ZVT6 689 aa6.77□□□□□ -1.33
ATP2C1-213ENST00000508297 GOLGA2Q08379 1002 aa6.76□□□□□ -1.33
ATP2C1-213ENST00000508297 TRIM66O15016 1216 aa6.75□□□□□ -1.33
ATP2C1-213ENST00000508297 PPP1R37O75864 691 aa6.75□□□□□ -1.33
ATP2C1-213ENST00000508297 PDE4DQ08499 809 aa6.75□□□□□ -1.33
ATP2C1-213ENST00000508297 CCDC82Q8N4S0 544 aa6.75□□□□□ -1.33
ATP2C1-213ENST00000508297 FAM117AQ9C073 453 aa6.75□□□□□ -1.33
ATP2C1-213ENST00000508297 RBM26Q5T8P6 1007 aaKnown RBP6.74□□□□□ -1.33
ATP2C1-213ENST00000508297 KRI1Q8N9T8 703 aaKnown RBP6.74□□□□□ -1.33
ATP2C1-213ENST00000508297 L3MBTL3Q96JM7 780 aaPredicted RBP6.74□□□□□ -1.33
ATP2C1-213ENST00000508297 MFRPQ9BY79 579 aa6.74□□□□□ -1.33
ATP2C1-213ENST00000508297 SMYD5Q6GMV2 418 aa6.73□□□□□ -1.33
ATP2C1-213ENST00000508297 ZNF316A6NFI3 1004 aaPredicted RBP6.72□□□□□ -1.33
ATP2C1-213ENST00000508297 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
ATP2C1-213ENST00000508297 PLEKHG3A1L390 1219 aa6.71□□□□□ -1.34
ATP2C1-213ENST00000508297 FAM205CA6NFA0 338 aa6.71□□□□□ -1.34
ATP2C1-213ENST00000508297 CLUAP1Q96AJ1 413 aa6.71□□□□□ -1.34
ATP2C1-213ENST00000508297 HS3ST6Q96QI5 342 aa6.71□□□□□ -1.34
ATP2C1-213ENST00000508297 ONECUT3O60422 494 aaPredicted RBP6.69□□□□□ -1.34
ATP2C1-213ENST00000508297 MLLT3P42568 568 aaPredicted RBP6.69□□□□□ -1.34
ATP2C1-213ENST00000508297 GPIHBP1Q8IV16 184 aa6.69□□□□□ -1.34
ATP2C1-213ENST00000508297 NCKAP5LQ9HCH0 1330 aa6.69□□□□□ -1.34
ATP2C1-213ENST00000508297 TRAK2O60296 914 aa6.68□□□□□ -1.34
ATP2C1-213ENST00000508297 IGSF3O75054 1194 aa6.68□□□□□ -1.34
ATP2C1-213ENST00000508297 PCDHB8Q9UN66 801 aa6.68□□□□□ -1.34
ATP2C1-213ENST00000508297 G3V3G9 751 aa6.67□□□□□ -1.34
ATP2C1-213ENST00000508297 RAD21O60216 631 aa6.67□□□□□ -1.34
ATP2C1-213ENST00000508297 FLIIQ13045 1269 aa6.67□□□□□ -1.34
ATP2C1-213ENST00000508297 RGS22Q8NE09 1264 aa6.67□□□□□ -1.34
ATP2C1-213ENST00000508297 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
ATP2C1-213ENST00000508297 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
ATP2C1-213ENST00000508297 ZNF467Q7Z7K2 595 aaPredicted RBP6.66□□□□□ -1.34
ATP2C1-213ENST00000508297 TRAIPQ9BWF2 469 aa6.66□□□□□ -1.34
ATP2C1-213ENST00000508297 A6NJR5 290 aa6.65□□□□□ -1.34
ATP2C1-213ENST00000508297 LARP6Q9BRS8 491 aaKnown RBP6.65□□□□□ -1.34
ATP2C1-213ENST00000508297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATP2C1-213ENST00000508297 MTMR7Q9Y216 660 aa6.65□□□□□ -1.34
ATP2C1-213ENST00000508297 AEBP1Q8IUX7 1158 aa6.64□□□□□ -1.35
ATP2C1-213ENST00000508297 PDCD7Q8N8D1 485 aaKnown RBP6.64□□□□□ -1.35
ATP2C1-213ENST00000508297 ZNF428Q96B54 188 aa6.64□□□□□ -1.35
ATP2C1-213ENST00000508297 ARIH1Q9Y4X5 557 aaPredicted RBP6.64□□□□□ -1.35
ATP2C1-213ENST00000508297 ZNF710Q8N1W2 664 aa6.63□□□□□ -1.35
ATP2C1-213ENST00000508297 FBXO22Q8NEZ5 403 aa6.63□□□□□ -1.35
ATP2C1-213ENST00000508297 PDAP1Q13442 181 aaKnown RBP6.62□□□□□ -1.35
ATP2C1-213ENST00000508297 ZNF777Q9ULD5 760 aaPredicted RBP6.62□□□□□ -1.35
ATP2C1-213ENST00000508297 POTEB3A0JP26 581 aa6.61□□□□□ -1.35
ATP2C1-213ENST00000508297 MFSD10Q14728 455 aa6.61□□□□□ -1.35
ATP2C1-213ENST00000508297 FOXD4L5Q5VV16 416 aaPredicted RBP6.61□□□□□ -1.35
ATP2C1-213ENST00000508297 POTEBQ6S5H4 581 aa6.61□□□□□ -1.35
ATP2C1-213ENST00000508297 FOXD4L4Q8WXT5 416 aaPredicted RBP6.61□□□□□ -1.35
ATP2C1-213ENST00000508297 RNF166Q96A37 237 aaPredicted RBP6.61□□□□□ -1.35
ATP2C1-213ENST00000508297 GPR37O15354 613 aa6.6□□□□□ -1.35
ATP2C1-213ENST00000508297 SHROOM4Q9ULL8 1493 aa6.6□□□□□ -1.35
ATP2C1-213ENST00000508297 ERBB3P21860 1342 aa6.59□□□□□ -1.35
ATP2C1-213ENST00000508297 RIMBP2O15034 1052 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms