RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 ZEB1P37275 1124 aaPredicted RBP24.21■■□□□ 1.47
SPSB4-203ENST00000508126 ZNF644Q9H582 1327 aaPredicted RBP24.21■■□□□ 1.47
SPSB4-203ENST00000508126 ASXL2Q76L83 1435 aa24.21■■□□□ 1.47
SPSB4-203ENST00000508126 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
SPSB4-203ENST00000508126 MYO5CQ9NQX4 1742 aa24.2■■□□□ 1.46
SPSB4-203ENST00000508126 DAPK1P53355 1430 aa24.2■■□□□ 1.46
SPSB4-203ENST00000508126 RAB3GAP2Q9H2M9 1393 aa24.19■■□□□ 1.46
SPSB4-203ENST00000508126 CDC42BPBQ9Y5S2 1711 aa24.17■■□□□ 1.46
SPSB4-203ENST00000508126 HFM1A2PYH4 1435 aa24.17■■□□□ 1.46
SPSB4-203ENST00000508126 ARHGAP5Q13017 1502 aa24.16■■□□□ 1.46
SPSB4-203ENST00000508126 ABCC5O15440 1437 aa24.15■■□□□ 1.46
SPSB4-203ENST00000508126 AKNAQ7Z591 1439 aa24.15■■□□□ 1.46
SPSB4-203ENST00000508126 CYB5RLQ6IPT4 315 aa24.15■■□□□ 1.46
SPSB4-203ENST00000508126 PLCH2O75038 1416 aa24.13■■□□□ 1.45
SPSB4-203ENST00000508126 SAMD9LQ8IVG5 1584 aa24.11■■□□□ 1.45
SPSB4-203ENST00000508126 CHIC2Q9UKJ5 165 aa24.11■■□□□ 1.45
SPSB4-203ENST00000508126 ABCA9Q8IUA7 1624 aa24.11■■□□□ 1.45
SPSB4-203ENST00000508126 NAIPQ13075 1403 aa24.1■■□□□ 1.45
SPSB4-203ENST00000508126 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
SPSB4-203ENST00000508126 ROCK1Q13464 1354 aa24.1■■□□□ 1.45
SPSB4-203ENST00000508126 CROCC2H7BZ55 1655 aa24.09■■□□□ 1.45
SPSB4-203ENST00000508126 GCC2Q8IWJ2 1684 aa24.09■■□□□ 1.45
SPSB4-203ENST00000508126 PLEKHH2Q8IVE3 1493 aa24.09■■□□□ 1.45
SPSB4-203ENST00000508126 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
SPSB4-203ENST00000508126 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
SPSB4-203ENST00000508126 DHX57Q6P158 1386 aaKnown RBP24.07■■□□□ 1.44
SPSB4-203ENST00000508126 MAPKBP1O60336 1514 aa24.06■■□□□ 1.44
SPSB4-203ENST00000508126 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
SPSB4-203ENST00000508126 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
SPSB4-203ENST00000508126 ADGBQ8N7X0 1667 aa24.04■■□□□ 1.44
SPSB4-203ENST00000508126 MBD5Q9P267 1494 aa24.04■■□□□ 1.44
SPSB4-203ENST00000508126 KIAA1107Q9UPP5 1409 aa24.03■■□□□ 1.44
SPSB4-203ENST00000508126 CCDC141Q6ZP82 1450 aa24.03■■□□□ 1.44
SPSB4-203ENST00000508126 SYCP2Q9BX26 1530 aa24.03■■□□□ 1.44
SPSB4-203ENST00000508126 RSPH4AQ5TD94 716 aa24.03■■□□□ 1.44
SPSB4-203ENST00000508126 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
SPSB4-203ENST00000508126 CLSPNQ9HAW4 1339 aa24.01■■□□□ 1.43
SPSB4-203ENST00000508126 HNRNPMP52272 730 aaKnown RBP eCLIP24■■□□□ 1.43
SPSB4-203ENST00000508126 C9orf84Q5VXU9 1444 aa24■■□□□ 1.43
SPSB4-203ENST00000508126 ANKRD30AQ9BXX3 1397 aa23.99■■□□□ 1.43
SPSB4-203ENST00000508126 TSPY4P0CV99 314 aa23.98■■□□□ 1.43
SPSB4-203ENST00000508126 TSPY10P0CW01 314 aa23.98■■□□□ 1.43
SPSB4-203ENST00000508126 ABCC1P33527 1531 aa23.98■■□□□ 1.43
SPSB4-203ENST00000508126 NCOA1Q15788 1441 aa23.97■■□□□ 1.43
SPSB4-203ENST00000508126 FANCAO15360 1455 aa23.96■■□□□ 1.43
SPSB4-203ENST00000508126 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
SPSB4-203ENST00000508126 CD109Q6YHK3 1445 aa23.92■■□□□ 1.42
SPSB4-203ENST00000508126 MAST1Q9Y2H9 1570 aa23.92■■□□□ 1.42
SPSB4-203ENST00000508126 ARHGEF12Q9NZN5 1544 aa23.91■■□□□ 1.42
SPSB4-203ENST00000508126 CFAP74Q9C0B2 1584 aa23.89■■□□□ 1.42
SPSB4-203ENST00000508126 KDM6BO15054 1643 aa23.89■■□□□ 1.42
SPSB4-203ENST00000508126 ADGRL1O94910 1474 aa23.87■■□□□ 1.41
SPSB4-203ENST00000508126 GLI2P10070 1586 aa23.86■■□□□ 1.41
SPSB4-203ENST00000508126 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
SPSB4-203ENST00000508126 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
SPSB4-203ENST00000508126 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
SPSB4-203ENST00000508126 PLXNC1O60486 1568 aa23.83■■□□□ 1.41
SPSB4-203ENST00000508126 MAP3K4Q9Y6R4 1608 aa23.82■■□□□ 1.4
SPSB4-203ENST00000508126 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
SPSB4-203ENST00000508126 DIP2BQ9P265 1576 aa23.82■■□□□ 1.4
SPSB4-203ENST00000508126 SCAPERQ9BY12 1400 aa23.81■■□□□ 1.4
SPSB4-203ENST00000508126 NEO1Q92859 1461 aa23.79■■□□□ 1.4
SPSB4-203ENST00000508126 RTEL1-TNFRSF6BF6WH68 1400 aa23.78■■□□□ 1.4
SPSB4-203ENST00000508126 SPAG9O60271 1321 aaKnown RBP23.77■■□□□ 1.4
SPSB4-203ENST00000508126 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
SPSB4-203ENST00000508126 ZFYVE16Q7Z3T8 1539 aa23.75■■□□□ 1.39
SPSB4-203ENST00000508126 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
SPSB4-203ENST00000508126 ZNF518AQ6AHZ1 1483 aa23.74■■□□□ 1.39
SPSB4-203ENST00000508126 DUOX2Q9NRD8 1548 aa23.73■■□□□ 1.39
SPSB4-203ENST00000508126 INO80Q9ULG1 1556 aaPredicted RBP23.72■■□□□ 1.39
SPSB4-203ENST00000508126 ATP7AQ04656 1500 aa23.72■■□□□ 1.39
SPSB4-203ENST00000508126 POGZQ7Z3K3 1410 aa23.71■■□□□ 1.39
SPSB4-203ENST00000508126 MPHOSPH9Q99550 1183 aa23.7■■□□□ 1.39
SPSB4-203ENST00000508126 ERBINQ96RT1 1412 aa23.7■■□□□ 1.38
SPSB4-203ENST00000508126 KDM5CP41229 1560 aa23.67■■□□□ 1.38
SPSB4-203ENST00000508126 DENND4BO75064 1496 aaPredicted RBP23.66■■□□□ 1.38
SPSB4-203ENST00000508126 PZPP20742 1482 aa23.66■■□□□ 1.38
SPSB4-203ENST00000508126 KDM5DQ9BY66 1539 aa23.66■■□□□ 1.38
SPSB4-203ENST00000508126 SLC4A1APQ9BWU0 796 aaKnown RBP23.66■■□□□ 1.38
SPSB4-203ENST00000508126 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
SPSB4-203ENST00000508126 MYT1LQ9UL68 1186 aa23.64■■□□□ 1.37
SPSB4-203ENST00000508126 NUP155O75694 1391 aa23.64■■□□□ 1.37
SPSB4-203ENST00000508126 UNC13BO14795 1591 aa23.62■■□□□ 1.37
SPSB4-203ENST00000508126 KIF13AQ9H1H9 1805 aa23.61■■□□□ 1.37
SPSB4-203ENST00000508126 HECW2Q9P2P5 1572 aa23.61■■□□□ 1.37
SPSB4-203ENST00000508126 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
SPSB4-203ENST00000508126 SIN3AQ96ST3 1273 aa23.6■■□□□ 1.37
SPSB4-203ENST00000508126 KIDINS220Q9ULH0 1771 aa23.6■■□□□ 1.37
SPSB4-203ENST00000508126 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
SPSB4-203ENST00000508126 NEUROD1Q13562 356 aa23.59■■□□□ 1.37
SPSB4-203ENST00000508126 TSPOAP1O95153 1857 aa23.59■■□□□ 1.37
SPSB4-203ENST00000508126 TIMELESSQ9UNS1 1208 aa23.57■■□□□ 1.36
SPSB4-203ENST00000508126 MAGI2Q86UL8 1455 aa23.56■■□□□ 1.36
SPSB4-203ENST00000508126 RICTORQ6R327 1708 aa23.56■■□□□ 1.36
SPSB4-203ENST00000508126 FAM135AQ9P2D6 1515 aa23.55■■□□□ 1.36
SPSB4-203ENST00000508126 RAPGEF3O95398 923 aa23.54■■□□□ 1.36
SPSB4-203ENST00000508126 DHX29Q7Z478 1369 aaKnown RBP23.54■■□□□ 1.36
SPSB4-203ENST00000508126 EIF2AK4Q9P2K8 1649 aaKnown RBP23.54■■□□□ 1.36
SPSB4-203ENST00000508126 ANKRD30BQ9BXX2 1392 aa23.53■■□□□ 1.36
SPSB4-203ENST00000508126 PKD2Q13563 968 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms