RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 RICTORQ6R327 1708 aa44.34■■■■■ 4.69
MSX2-202ENST00000507785 RAPGEF3O95398 923 aa44.34■■■■■ 4.69
MSX2-202ENST00000507785 DENND4BO75064 1496 aaPredicted RBP44.33■■■■■ 4.69
MSX2-202ENST00000507785 ADGRL1O94910 1474 aa44.31■■■■■ 4.68
MSX2-202ENST00000507785 MAP3K1Q13233 1512 aa44.29■■■■■ 4.68
MSX2-202ENST00000507785 GPATCH8Q9UKJ3 1502 aaKnown RBP44.26■■■■■ 4.68
MSX2-202ENST00000507785 SCAPERQ9BY12 1400 aa44.24■■■■■ 4.67
MSX2-202ENST00000507785 LRRC9Q6ZRR7 1453 aa44.2■■■■■ 4.67
MSX2-202ENST00000507785 POGZQ7Z3K3 1410 aa44.18■■■■■ 4.66
MSX2-202ENST00000507785 SUPT6HQ7KZ85 1726 aaKnown RBP44.18■■■■■ 4.66
MSX2-202ENST00000507785 ZMYM4Q5VZL5 1548 aa44.17■■■■■ 4.66
MSX2-202ENST00000507785 CCNB3Q8WWL7 1395 aa44.17■■■■■ 4.66
MSX2-202ENST00000507785 ABCC1P33527 1531 aa44.13■■■■■ 4.65
MSX2-202ENST00000507785 NCOA2Q15596 1464 aa44.12■■■■■ 4.65
MSX2-202ENST00000507785 SAMD9LQ8IVG5 1584 aa44.09■■■■■ 4.65
MSX2-202ENST00000507785 ITSN2Q9NZM3 1697 aa44.08■■■■■ 4.65
MSX2-202ENST00000507785 KANK4Q5T7N3 995 aaPredicted RBP44.08■■■■■ 4.65
MSX2-202ENST00000507785 ARHGEF12Q9NZN5 1544 aa44.07■■■■■ 4.65
MSX2-202ENST00000507785 ARHGEF40Q8TER5 1519 aa44.05■■■■■ 4.64
MSX2-202ENST00000507785 ZNF518AQ6AHZ1 1483 aa44.04■■■■■ 4.64
MSX2-202ENST00000507785 CFDP1Q9UEE9 299 aaPredicted RBP44.03■■■■■ 4.64
MSX2-202ENST00000507785 MAGI2Q86UL8 1455 aa44.02■■■■■ 4.64
MSX2-202ENST00000507785 KDM5CP41229 1560 aa44.02■■■■■ 4.64
MSX2-202ENST00000507785 ZNF777Q9ULD5 760 aaPredicted RBP43.98■■■■■ 4.63
MSX2-202ENST00000507785 ZFYVE16Q7Z3T8 1539 aa43.98■■■■■ 4.63
MSX2-202ENST00000507785 TRAPPC8Q9Y2L5 1435 aa43.98■■■■■ 4.63
MSX2-202ENST00000507785 KDM4FA0A1W2PPD8 638 aa43.97■■■■■ 4.63
MSX2-202ENST00000507785 APLP2Q06481 763 aa43.97■■■■■ 4.63
MSX2-202ENST00000507785 AFAP1Q8N556 730 aa43.96■■■■■ 4.63
MSX2-202ENST00000507785 YEATS2Q9ULM3 1422 aa43.96■■■■■ 4.63
MSX2-202ENST00000507785 SYCP2Q9BX26 1530 aa43.94■■■■■ 4.63
MSX2-202ENST00000507785 KIAA1107Q9UPP5 1409 aa43.92■■■■■ 4.62
MSX2-202ENST00000507785 PLEKHH2Q8IVE3 1493 aa43.92■■■■■ 4.62
MSX2-202ENST00000507785 HECW2Q9P2P5 1572 aa43.88■■■■■ 4.61
MSX2-202ENST00000507785 MLH3Q9UHC1 1453 aa43.85■■■■■ 4.61
MSX2-202ENST00000507785 ZNF644Q9H582 1327 aaPredicted RBP43.85■■■■■ 4.61
MSX2-202ENST00000507785 HNRNPMP52272 730 aaKnown RBP eCLIP43.83■■■■■ 4.61
MSX2-202ENST00000507785 SIGLEC1Q9BZZ2 1709 aa43.79■■■■■ 4.6
MSX2-202ENST00000507785 MBD5Q9P267 1494 aa43.77■■■■■ 4.6
MSX2-202ENST00000507785 KIDINS220Q9ULH0 1771 aa43.77■■■■■ 4.6
MSX2-202ENST00000507785 ATP10AO60312 1499 aa43.76■■■■■ 4.6
MSX2-202ENST00000507785 CAMSAP2Q08AD1 1489 aa43.76■■■■■ 4.6
MSX2-202ENST00000507785 AEBP2Q6ZN18 517 aaPredicted RBP43.75■■■■■ 4.59
MSX2-202ENST00000507785 DIP2CQ9Y2E4 1556 aa43.75■■■■■ 4.59
MSX2-202ENST00000507785 MYOM3Q5VTT5 1437 aa43.74■■■■■ 4.59
MSX2-202ENST00000507785 ABCA6Q8N139 1617 aa43.74■■■■■ 4.59
MSX2-202ENST00000507785 C9orf84Q5VXU9 1444 aa43.71■■■■■ 4.59
MSX2-202ENST00000507785 BCORL1Q5H9F3 1711 aa43.7■■■■■ 4.59
MSX2-202ENST00000507785 MIA2Q96PC5 1412 aa43.69■■■■■ 4.58
MSX2-202ENST00000507785 MYT1LQ9UL68 1186 aa43.67■■■■■ 4.58
MSX2-202ENST00000507785 ADAMTSL3P82987 1691 aa43.67■■■■■ 4.58
MSX2-202ENST00000507785 INO80Q9ULG1 1556 aaPredicted RBP43.67■■■■■ 4.58
MSX2-202ENST00000507785 SPAG9O60271 1321 aaKnown RBP43.66■■■■■ 4.58
MSX2-202ENST00000507785 ARID4BQ4LE39 1312 aaPredicted RBP43.66■■■■■ 4.58
MSX2-202ENST00000507785 REREQ9P2R6 1566 aa43.66■■■■■ 4.58
MSX2-202ENST00000507785 ATP7AQ04656 1500 aa43.63■■■■■ 4.57
MSX2-202ENST00000507785 ARHGEF5Q12774 1597 aa43.6■■■■■ 4.57
MSX2-202ENST00000507785 CCDC141Q6ZP82 1450 aa43.59■■■■■ 4.57
MSX2-202ENST00000507785 RSPH4AQ5TD94 716 aa43.54■■■■■ 4.56
MSX2-202ENST00000507785 MADDQ8WXG6 1647 aa43.51■■■■■ 4.56
MSX2-202ENST00000507785 PTPN23Q9H3S7 1636 aa43.51■■■■■ 4.56
MSX2-202ENST00000507785 RTEL1-TNFRSF6BF6WH68 1400 aa43.5■■■■■ 4.55
MSX2-202ENST00000507785 FGD6Q6ZV73 1430 aa43.5■■■■■ 4.55
MSX2-202ENST00000507785 AGLP35573 1532 aa43.49■■■■■ 4.55
MSX2-202ENST00000507785 TCOF1Q13428 1488 aaKnown RBP43.45■■■■■ 4.55
MSX2-202ENST00000507785 ADGBQ8N7X0 1667 aa43.43■■■■■ 4.54
MSX2-202ENST00000507785 PLXNC1O60486 1568 aa43.41■■■■■ 4.54
MSX2-202ENST00000507785 A2MP01023 1474 aa43.39■■■■■ 4.54
MSX2-202ENST00000507785 MLECQ14165 292 aa43.39■■■■■ 4.54
MSX2-202ENST00000507785 MAST1Q9Y2H9 1570 aa43.38■■■■■ 4.54
MSX2-202ENST00000507785 RIMS1Q86UR5 1692 aaKnown RBP43.38■■■■■ 4.54
MSX2-202ENST00000507785 PTPRMP28827 1452 aa43.38■■■■■ 4.53
MSX2-202ENST00000507785 FER1L4A9Z1Z3 1794 aa43.37■■■■■ 4.53
MSX2-202ENST00000507785 TSPY4P0CV99 314 aa43.34■■■■■ 4.53
MSX2-202ENST00000507785 TSPY10P0CW01 314 aa43.34■■■■■ 4.53
MSX2-202ENST00000507785 CROCC2H7BZ55 1655 aa43.3■■■■■ 4.52
MSX2-202ENST00000507785 ABCC5O15440 1437 aa43.29■■■■■ 4.52
MSX2-202ENST00000507785 DNMT1P26358 1616 aaKnown RBP43.29■■■■■ 4.52
MSX2-202ENST00000507785 PPARGC1BQ86YN6 1023 aaKnown RBP43.28■■■■■ 4.52
MSX2-202ENST00000507785 DHX29Q7Z478 1369 aaKnown RBP43.25■■■■■ 4.51
MSX2-202ENST00000507785 SHANK2Q9UPX8 1470 aa43.24■■■■■ 4.51
MSX2-202ENST00000507785 DAPK1P53355 1430 aa43.23■■■■■ 4.51
MSX2-202ENST00000507785 FAM50AQ14320 339 aaKnown RBP43.12■■■■■ 4.49
MSX2-202ENST00000507785 CNTLNQ9NXG0 1405 aa43.05■■■■■ 4.48
MSX2-202ENST00000507785 DUOX2Q9NRD8 1548 aa43.02■■■■■ 4.48
MSX2-202ENST00000507785 GGT6Q6P531 493 aa43.02■■■■■ 4.48
MSX2-202ENST00000507785 KIF3BO15066 747 aa43.01■■■■■ 4.48
MSX2-202ENST00000507785 MROH2AA6NES4 1674 aa43.01■■■■■ 4.48
MSX2-202ENST00000507785 C3P01024 1663 aa43.01■■■■■ 4.48
MSX2-202ENST00000507785 KIF15Q9NS87 1388 aa43.01■■■■■ 4.48
MSX2-202ENST00000507785 EIF2AK4Q9P2K8 1649 aaKnown RBP43■■■■■ 4.47
MSX2-202ENST00000507785 ESF1Q9H501 851 aaKnown RBP42.99■■■■■ 4.47
MSX2-202ENST00000507785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.98■■■■■ 4.47
MSX2-202ENST00000507785 ADGRL2O95490 1459 aa42.98■■■■■ 4.47
MSX2-202ENST00000507785 CLTCQ00610 1675 aaKnown RBP42.98■■■■■ 4.47
MSX2-202ENST00000507785 PLPPR3Q6T4P5 718 aa42.97■■■■■ 4.47
MSX2-202ENST00000507785 PPP6R1Q9UPN7 881 aa42.97■■■■■ 4.47
MSX2-202ENST00000507785 CEBPAP49715 358 aaPredicted RBP42.96■■■■■ 4.47
MSX2-202ENST00000507785 CHIC2Q9UKJ5 165 aa42.96■■■■■ 4.47
MSX2-202ENST00000507785 ANKRD30AQ9BXX3 1397 aa42.95■■■■■ 4.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms