RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ARHGAP5Q13017 1502 aa26.45■■□□□ 1.83
RNF4-209ENST00000507784 TCOF1Q13428 1488 aaKnown RBP26.43■■□□□ 1.82
RNF4-209ENST00000507784 ZNF644Q9H582 1327 aaPredicted RBP26.43■■□□□ 1.82
RNF4-209ENST00000507784 PLCH2O75038 1416 aa26.43■■□□□ 1.82
RNF4-209ENST00000507784 FAM69CQ0P6D2 419 aa26.41■■□□□ 1.82
RNF4-209ENST00000507784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.41■■□□□ 1.82
RNF4-209ENST00000507784 CAMSAP2Q08AD1 1489 aa26.4■■□□□ 1.82
RNF4-209ENST00000507784 EFCAB2Q5VUJ9 269 aa26.39■■□□□ 1.82
RNF4-209ENST00000507784 CD109Q6YHK3 1445 aa26.39■■□□□ 1.81
RNF4-209ENST00000507784 GLI2P10070 1586 aa26.37■■□□□ 1.81
RNF4-209ENST00000507784 DIP2BQ9P265 1576 aa26.37■■□□□ 1.81
RNF4-209ENST00000507784 SAMD9LQ8IVG5 1584 aa26.34■■□□□ 1.81
RNF4-209ENST00000507784 ARAP3Q8WWN8 1544 aa26.32■■□□□ 1.8
RNF4-209ENST00000507784 HNRNPMP52272 730 aaKnown RBP eCLIP26.31■■□□□ 1.8
RNF4-209ENST00000507784 MAP3K4Q9Y6R4 1608 aa26.31■■□□□ 1.8
RNF4-209ENST00000507784 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
RNF4-209ENST00000507784 FANCAO15360 1455 aa26.3■■□□□ 1.8
RNF4-209ENST00000507784 TSPOAP1O95153 1857 aa26.29■■□□□ 1.8
RNF4-209ENST00000507784 PLEKHH2Q8IVE3 1493 aa26.27■■□□□ 1.8
RNF4-209ENST00000507784 DNMT1P26358 1616 aaKnown RBP26.27■■□□□ 1.8
RNF4-209ENST00000507784 DAPK1P53355 1430 aa26.25■■□□□ 1.79
RNF4-209ENST00000507784 CHIC2Q9UKJ5 165 aa26.25■■□□□ 1.79
RNF4-209ENST00000507784 CFAP74Q9C0B2 1584 aa26.24■■□□□ 1.79
RNF4-209ENST00000507784 SYCP2Q9BX26 1530 aa26.24■■□□□ 1.79
RNF4-209ENST00000507784 ABCC5O15440 1437 aa26.23■■□□□ 1.79
RNF4-209ENST00000507784 PTPRKQ15262 1439 aa26.22■■□□□ 1.79
RNF4-209ENST00000507784 AKNAQ7Z591 1439 aa26.22■■□□□ 1.79
RNF4-209ENST00000507784 TRHP20396 242 aaPredicted RBP26.21■■□□□ 1.79
RNF4-209ENST00000507784 KIAA1107Q9UPP5 1409 aa26.21■■□□□ 1.79
RNF4-209ENST00000507784 ARHGEF5Q12774 1597 aa26.2■■□□□ 1.79
RNF4-209ENST00000507784 ABCC1P33527 1531 aa26.2■■□□□ 1.79
RNF4-209ENST00000507784 RSPH4AQ5TD94 716 aa26.2■■□□□ 1.78
RNF4-209ENST00000507784 TSPY4P0CV99 314 aa26.19■■□□□ 1.78
RNF4-209ENST00000507784 TSPY10P0CW01 314 aa26.19■■□□□ 1.78
RNF4-209ENST00000507784 CROCC2H7BZ55 1655 aa26.19■■□□□ 1.78
RNF4-209ENST00000507784 ADGRL1O94910 1474 aa26.18■■□□□ 1.78
RNF4-209ENST00000507784 MBD5Q9P267 1494 aa26.18■■□□□ 1.78
RNF4-209ENST00000507784 ARHGEF12Q9NZN5 1544 aa26.18■■□□□ 1.78
RNF4-209ENST00000507784 CCDC141Q6ZP82 1450 aa26.17■■□□□ 1.78
RNF4-209ENST00000507784 SCAPERQ9BY12 1400 aa26.16■■□□□ 1.78
RNF4-209ENST00000507784 NEO1Q92859 1461 aa26.16■■□□□ 1.78
RNF4-209ENST00000507784 PPRC1Q5VV67 1664 aaKnown RBP26.15■■□□□ 1.78
RNF4-209ENST00000507784 RRP7BPQ9NSQ0 103 aa26.14■■□□□ 1.78
RNF4-209ENST00000507784 TEX14Q8IWB6 1497 aa26.13■■□□□ 1.77
RNF4-209ENST00000507784 TRAPPC8Q9Y2L5 1435 aa26.12■■□□□ 1.77
RNF4-209ENST00000507784 ADGBQ8N7X0 1667 aa26.12■■□□□ 1.77
RNF4-209ENST00000507784 C9orf84Q5VXU9 1444 aa26.1■■□□□ 1.77
RNF4-209ENST00000507784 AFAP1Q8N556 730 aa26.09■■□□□ 1.77
RNF4-209ENST00000507784 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
RNF4-209ENST00000507784 SHANK2Q9UPX8 1470 aa26.09■■□□□ 1.77
RNF4-209ENST00000507784 SETD5Q9C0A6 1442 aa26.08■■□□□ 1.77
RNF4-209ENST00000507784 ANKRD30AQ9BXX3 1397 aa26.07■■□□□ 1.76
RNF4-209ENST00000507784 ROCK1Q13464 1354 aa26.06■■□□□ 1.76
RNF4-209ENST00000507784 SPAG9O60271 1321 aaKnown RBP26.05■■□□□ 1.76
RNF4-209ENST00000507784 DENND4BO75064 1496 aaPredicted RBP26.04■■□□□ 1.76
RNF4-209ENST00000507784 MAST1Q9Y2H9 1570 aa26.03■■□□□ 1.76
RNF4-209ENST00000507784 HFM1A2PYH4 1435 aa26.03■■□□□ 1.76
RNF4-209ENST00000507784 ADGRL2O95490 1459 aa26.03■■□□□ 1.76
RNF4-209ENST00000507784 NAIPQ13075 1403 aa26.01■■□□□ 1.75
RNF4-209ENST00000507784 NCOA1Q15788 1441 aa26.01■■□□□ 1.75
RNF4-209ENST00000507784 GCC2Q8IWJ2 1684 aa26.01■■□□□ 1.75
RNF4-209ENST00000507784 RAB3GAP2Q9H2M9 1393 aa26.01■■□□□ 1.75
RNF4-209ENST00000507784 ZNF518AQ6AHZ1 1483 aa26■■□□□ 1.75
RNF4-209ENST00000507784 POGZQ7Z3K3 1410 aa26■■□□□ 1.75
RNF4-209ENST00000507784 RAPGEF3O95398 923 aa26■■□□□ 1.75
RNF4-209ENST00000507784 RICTORQ6R327 1708 aa25.95■■□□□ 1.74
RNF4-209ENST00000507784 RTEL1-TNFRSF6BF6WH68 1400 aa25.95■■□□□ 1.74
RNF4-209ENST00000507784 KIF15Q9NS87 1388 aa25.95■■□□□ 1.74
RNF4-209ENST00000507784 ATP7AQ04656 1500 aa25.93■■□□□ 1.74
RNF4-209ENST00000507784 ZFYVE16Q7Z3T8 1539 aa25.93■■□□□ 1.74
RNF4-209ENST00000507784 PLXNC1O60486 1568 aa25.92■■□□□ 1.74
RNF4-209ENST00000507784 INO80Q9ULG1 1556 aaPredicted RBP25.92■■□□□ 1.74
RNF4-209ENST00000507784 KDM5CP41229 1560 aa25.91■■□□□ 1.74
RNF4-209ENST00000507784 KDM6BO15054 1643 aa25.91■■□□□ 1.74
RNF4-209ENST00000507784 HRCP23327 699 aa25.9■■□□□ 1.74
RNF4-209ENST00000507784 KIDINS220Q9ULH0 1771 aa25.9■■□□□ 1.74
RNF4-209ENST00000507784 HECW2Q9P2P5 1572 aa25.89■■□□□ 1.73
RNF4-209ENST00000507784 TRIM52Q96A61 297 aa25.88■■□□□ 1.73
RNF4-209ENST00000507784 ANKRD50Q9ULJ7 1429 aa25.88■■□□□ 1.73
RNF4-209ENST00000507784 FRMPD1Q5SYB0 1578 aa25.87■■□□□ 1.73
RNF4-209ENST00000507784 MLH3Q9UHC1 1453 aa25.87■■□□□ 1.73
RNF4-209ENST00000507784 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
RNF4-209ENST00000507784 DUOX2Q9NRD8 1548 aa25.85■■□□□ 1.73
RNF4-209ENST00000507784 COL17A1Q9UMD9 1497 aaPredicted RBP25.84■■□□□ 1.73
RNF4-209ENST00000507784 ZMYM4Q5VZL5 1548 aa25.79■■□□□ 1.72
RNF4-209ENST00000507784 ABCA6Q8N139 1617 aa25.79■■□□□ 1.72
RNF4-209ENST00000507784 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
RNF4-209ENST00000507784 ERBINQ96RT1 1412 aa25.77■■□□□ 1.72
RNF4-209ENST00000507784 DHX29Q7Z478 1369 aaKnown RBP25.76■■□□□ 1.71
RNF4-209ENST00000507784 YEATS2Q9ULM3 1422 aa25.76■■□□□ 1.71
RNF4-209ENST00000507784 DIP2CQ9Y2E4 1556 aa25.75■■□□□ 1.71
RNF4-209ENST00000507784 A2MP01023 1474 aa25.75■■□□□ 1.71
RNF4-209ENST00000507784 MAGI2Q86UL8 1455 aa25.75■■□□□ 1.71
RNF4-209ENST00000507784 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
RNF4-209ENST00000507784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.73■■□□□ 1.712e-10■■□□□ 13
RNF4-209ENST00000507784 KIF3BO15066 747 aa25.71■■□□□ 1.71
RNF4-209ENST00000507784 NUP155O75694 1391 aa25.69■■□□□ 1.7
RNF4-209ENST00000507784 ATP10AO60312 1499 aa25.68■■□□□ 1.7
RNF4-209ENST00000507784 EIF2AK4Q9P2K8 1649 aaKnown RBP25.67■■□□□ 1.7
RNF4-209ENST00000507784 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms