RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 EFCAB2Q5VUJ9 269 aa13.76□□□□□ -0.21
TRIO-209ENST00000507714 GPATCH8Q9UKJ3 1502 aaKnown RBP13.75□□□□□ -0.21
TRIO-209ENST00000507714 PLCH2O75038 1416 aa13.75□□□□□ -0.21
TRIO-209ENST00000507714 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
TRIO-209ENST00000507714 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
TRIO-209ENST00000507714 NEO1Q92859 1461 aa13.74□□□□□ -0.21
TRIO-209ENST00000507714 PREX2Q70Z35 1606 aa13.74□□□□□ -0.21
TRIO-209ENST00000507714 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
TRIO-209ENST00000507714 FANCAO15360 1455 aa13.74□□□□□ -0.21
TRIO-209ENST00000507714 ZNF777Q9ULD5 760 aaPredicted RBP13.73□□□□□ -0.21
TRIO-209ENST00000507714 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
TRIO-209ENST00000507714 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
TRIO-209ENST00000507714 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
TRIO-209ENST00000507714 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
TRIO-209ENST00000507714 PTPN23Q9H3S7 1636 aa13.69□□□□□ -0.22
TRIO-209ENST00000507714 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
TRIO-209ENST00000507714 RRBP1Q9P2E9 1410 aaKnown RBP13.68□□□□□ -0.22
TRIO-209ENST00000507714 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
TRIO-209ENST00000507714 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
TRIO-209ENST00000507714 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
TRIO-209ENST00000507714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRIO-209ENST00000507714 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
TRIO-209ENST00000507714 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
TRIO-209ENST00000507714 KIAA1107Q9UPP5 1409 aa13.65□□□□□ -0.22
TRIO-209ENST00000507714 CAMSAP2Q08AD1 1489 aa13.65□□□□□ -0.22
TRIO-209ENST00000507714 TCOF1Q13428 1488 aaKnown RBP13.65□□□□□ -0.22
TRIO-209ENST00000507714 TSPY4P0CV99 314 aa13.63□□□□□ -0.23
TRIO-209ENST00000507714 TSPY10P0CW01 314 aa13.63□□□□□ -0.23
TRIO-209ENST00000507714 SCAPERQ9BY12 1400 aa13.63□□□□□ -0.23
TRIO-209ENST00000507714 ZNF644Q9H582 1327 aaPredicted RBP13.63□□□□□ -0.23
TRIO-209ENST00000507714 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
TRIO-209ENST00000507714 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
TRIO-209ENST00000507714 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
TRIO-209ENST00000507714 ABCC1P33527 1531 aa13.61□□□□□ -0.23
TRIO-209ENST00000507714 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRIO-209ENST00000507714 ARHGEF5Q12774 1597 aa13.6□□□□□ -0.23
TRIO-209ENST00000507714 ITGAEP38570 1179 aa13.59□□□□□ -0.23
TRIO-209ENST00000507714 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
TRIO-209ENST00000507714 ZNF518AQ6AHZ1 1483 aa13.59□□□□□ -0.23
TRIO-209ENST00000507714 CCDC141Q6ZP82 1450 aa13.59□□□□□ -0.23
TRIO-209ENST00000507714 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
TRIO-209ENST00000507714 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.24
TRIO-209ENST00000507714 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
TRIO-209ENST00000507714 RICTORQ6R327 1708 aa13.57□□□□□ -0.24
TRIO-209ENST00000507714 ARID4BQ4LE39 1312 aaPredicted RBP13.57□□□□□ -0.24
TRIO-209ENST00000507714 MAGI2Q86UL8 1455 aa13.56□□□□□ -0.24
TRIO-209ENST00000507714 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
TRIO-209ENST00000507714 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
TRIO-209ENST00000507714 DAPK1P53355 1430 aa13.56□□□□□ -0.24
TRIO-209ENST00000507714 ABCC5O15440 1437 aa13.55□□□□□ -0.24
TRIO-209ENST00000507714 AFAP1Q8N556 730 aa13.54□□□□□ -0.24
TRIO-209ENST00000507714 TRAPPC8Q9Y2L5 1435 aa13.54□□□□□ -0.24
TRIO-209ENST00000507714 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
TRIO-209ENST00000507714 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
TRIO-209ENST00000507714 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
TRIO-209ENST00000507714 ARHGEF12Q9NZN5 1544 aa13.54□□□□□ -0.24
TRIO-209ENST00000507714 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
TRIO-209ENST00000507714 CROCC2H7BZ55 1655 aa13.53□□□□□ -0.24
TRIO-209ENST00000507714 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
TRIO-209ENST00000507714 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
TRIO-209ENST00000507714 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
TRIO-209ENST00000507714 ADGBQ8N7X0 1667 aa13.51□□□□□ -0.25
TRIO-209ENST00000507714 HECW2Q9P2P5 1572 aa13.51□□□□□ -0.25
TRIO-209ENST00000507714 MAST1Q9Y2H9 1570 aa13.51□□□□□ -0.25
TRIO-209ENST00000507714 ARHGEF40Q8TER5 1519 aa13.51□□□□□ -0.25
TRIO-209ENST00000507714 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
TRIO-209ENST00000507714 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
TRIO-209ENST00000507714 ROCK1Q13464 1354 aa13.5□□□□□ -0.25
TRIO-209ENST00000507714 MLH3Q9UHC1 1453 aa13.49□□□□□ -0.25
TRIO-209ENST00000507714 KDM5CP41229 1560 aa13.49□□□□□ -0.25
TRIO-209ENST00000507714 ACIN1Q9UKV3 1341 aaKnown RBP13.48□□□□□ -0.25
TRIO-209ENST00000507714 ATP7AQ04656 1500 aa13.48□□□□□ -0.25
TRIO-209ENST00000507714 ATP10AO60312 1499 aa13.48□□□□□ -0.25
TRIO-209ENST00000507714 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
TRIO-209ENST00000507714 ESF1Q9H501 851 aaKnown RBP13.46□□□□□ -0.25
TRIO-209ENST00000507714 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
TRIO-209ENST00000507714 PTPRKQ15262 1439 aa13.46□□□□□ -0.26
TRIO-209ENST00000507714 NCOA1Q15788 1441 aa13.46□□□□□ -0.26
TRIO-209ENST00000507714 YEATS2Q9ULM3 1422 aa13.46□□□□□ -0.26
TRIO-209ENST00000507714 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
TRIO-209ENST00000507714 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
TRIO-209ENST00000507714 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
TRIO-209ENST00000507714 KIF15Q9NS87 1388 aa13.45□□□□□ -0.26
TRIO-209ENST00000507714 HFM1A2PYH4 1435 aa13.43□□□□□ -0.26
TRIO-209ENST00000507714 MLECQ14165 292 aa13.43□□□□□ -0.26
TRIO-209ENST00000507714 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
TRIO-209ENST00000507714 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
TRIO-209ENST00000507714 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
TRIO-209ENST00000507714 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
TRIO-209ENST00000507714 ANKRD50Q9ULJ7 1429 aa13.4□□□□□ -0.26
TRIO-209ENST00000507714 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
TRIO-209ENST00000507714 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
TRIO-209ENST00000507714 HRCP23327 699 aa13.4□□□□□ -0.26
TRIO-209ENST00000507714 DHX29Q7Z478 1369 aaKnown RBP13.4□□□□□ -0.26
TRIO-209ENST00000507714 A2MP01023 1474 aa13.4□□□□□ -0.26
TRIO-209ENST00000507714 NAIPQ13075 1403 aa13.39□□□□□ -0.27
TRIO-209ENST00000507714 REREQ9P2R6 1566 aa13.39□□□□□ -0.27
TRIO-209ENST00000507714 BCORL1Q5H9F3 1711 aa13.39□□□□□ -0.27
TRIO-209ENST00000507714 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
TRIO-209ENST00000507714 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms