RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
LINC01088-203ENST00000507476 ZNF710Q8N1W2 664 aa14.68□□□□□ -0.06
LINC01088-203ENST00000507476 HOXB1P14653 301 aaPredicted RBP14.67□□□□□ -0.06
LINC01088-203ENST00000507476 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
LINC01088-203ENST00000507476 FAM205CA6NFA0 338 aa14.65□□□□□ -0.06
LINC01088-203ENST00000507476 HS3ST6Q96QI5 342 aa14.64□□□□□ -0.07
LINC01088-203ENST00000507476 KIF3CO14782 793 aa14.63□□□□□ -0.07
LINC01088-203ENST00000507476 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
LINC01088-203ENST00000507476 C2orf72A6NCS6 295 aa14.6□□□□□ -0.07
LINC01088-203ENST00000507476 NKX1-1Q15270 411 aaPredicted RBP14.58□□□□□ -0.08
LINC01088-203ENST00000507476 GPR153Q6NV75 609 aa14.58□□□□□ -0.08
LINC01088-203ENST00000507476 ZSWIM6Q9HCJ5 1215 aa14.58□□□□□ -0.08
LINC01088-203ENST00000507476 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
LINC01088-203ENST00000507476 ERBB3P21860 1342 aa14.52□□□□□ -0.08
LINC01088-203ENST00000507476 KRTAP3-3Q9BYR6 98 aa14.52□□□□□ -0.09
LINC01088-203ENST00000507476 KRTAP3-2Q9BYR7 98 aa14.52□□□□□ -0.09
LINC01088-203ENST00000507476 ARSIQ5FYB1 569 aa14.5□□□□□ -0.09
LINC01088-203ENST00000507476 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
LINC01088-203ENST00000507476 KHSRPQ92945 711 aaKnown RBP eCLIP14.48□□□□□ -0.097e-7■■□□□ 12.3
LINC01088-203ENST00000507476 SPNS2Q8IVW8 549 aa14.47□□□□□ -0.09
LINC01088-203ENST00000507476 VARS2Q5ST30 1063 aaKnown RBP14.46□□□□□ -0.09
LINC01088-203ENST00000507476 SLC34A2O95436 690 aa14.41□□□□□ -0.1
LINC01088-203ENST00000507476 MMRN1Q13201 1228 aa14.4□□□□□ -0.1
LINC01088-203ENST00000507476 PCDHGA4Q9Y5G9 962 aa14.38□□□□□ -0.11
LINC01088-203ENST00000507476 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
LINC01088-203ENST00000507476 GPHNQ9NQX3 736 aaPredicted RBP14.37□□□□□ -0.11
LINC01088-203ENST00000507476 RYDENQ9NUL5 291 aaKnown RBP14.37□□□□□ -0.11
LINC01088-203ENST00000507476 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
LINC01088-203ENST00000507476 GTPBP6O43824 516 aaPredicted RBP14.35□□□□□ -0.11
LINC01088-203ENST00000507476 NUDT7P0C024 238 aa14.35□□□□□ -0.11
LINC01088-203ENST00000507476 FOXK1P85037 733 aa14.35□□□□□ -0.11
LINC01088-203ENST00000507476 ZNF687Q8N1G0 1237 aa14.35□□□□□ -0.11
LINC01088-203ENST00000507476 DSG2Q14126 1118 aa14.33□□□□□ -0.12
LINC01088-203ENST00000507476 PLPP6Q8IY26 295 aa14.32□□□□□ -0.12
LINC01088-203ENST00000507476 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
LINC01088-203ENST00000507476 LHX6Q9UPM6 363 aa14.28□□□□□ -0.12
LINC01088-203ENST00000507476 CRISPLD2Q9H0B8 497 aa14.27□□□□□ -0.13
LINC01088-203ENST00000507476 KDM4FA0A1W2PPD8 638 aa14.25□□□□□ -0.13
LINC01088-203ENST00000507476 NCKAP5LQ9HCH0 1330 aa14.23□□□□□ -0.13
LINC01088-203ENST00000507476 PPP1R15BQ5SWA1 713 aa14.17□□□□□ -0.14
LINC01088-203ENST00000507476 POTEEQ6S8J3 1075 aa14.17□□□□□ -0.14
LINC01088-203ENST00000507476 PDE4AP27815 886 aa14.15□□□□□ -0.14
LINC01088-203ENST00000507476 OXER1Q8TDS5 423 aa14.14□□□□□ -0.15
LINC01088-203ENST00000507476 LSM11P83369 360 aaKnown RBP eCLIP14.13□□□□□ -0.154e-6■■■■■ 28.9
LINC01088-203ENST00000507476 TBC1D12O60347 775 aa14.12□□□□□ -0.15
LINC01088-203ENST00000507476 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
LINC01088-203ENST00000507476 ANKRD13DQ6ZTN6 518 aa14.12□□□□□ -0.15
LINC01088-203ENST00000507476 PBX2P40425 430 aa14.11□□□□□ -0.15
LINC01088-203ENST00000507476 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC01088-203ENST00000507476 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
LINC01088-203ENST00000507476 AXIN2Q9Y2T1 843 aa14.11□□□□□ -0.15
LINC01088-203ENST00000507476 CADPS2Q86UW7 1296 aa14.1□□□□□ -0.15
LINC01088-203ENST00000507476 LARP6Q9BRS8 491 aaKnown RBP14.1□□□□□ -0.15
LINC01088-203ENST00000507476 PSDA5PKW4 1024 aaPredicted RBP14.09□□□□□ -0.15
LINC01088-203ENST00000507476 MFSD10Q14728 455 aa14.07□□□□□ -0.16
LINC01088-203ENST00000507476 BBXQ8WY36 941 aaPredicted RBP14.06□□□□□ -0.16
LINC01088-203ENST00000507476 DDX27Q96GQ7 796 aaKnown RBP14.06□□□□□ -0.16
LINC01088-203ENST00000507476 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
LINC01088-203ENST00000507476 RNF166Q96A37 237 aaPredicted RBP14.05□□□□□ -0.16
LINC01088-203ENST00000507476 ARHGAP33O14559 1287 aa14.02□□□□□ -0.17
LINC01088-203ENST00000507476 PTGER2P43116 358 aa14.02□□□□□ -0.17
LINC01088-203ENST00000507476 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
LINC01088-203ENST00000507476 PSEN2P49810 448 aa13.98□□□□□ -0.17
LINC01088-203ENST00000507476 DMRTA1Q5VZB9 504 aa13.97□□□□□ -0.17
LINC01088-203ENST00000507476 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
LINC01088-203ENST00000507476 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-203ENST00000507476 EVI5O60447 810 aa13.94□□□□□ -0.18
LINC01088-203ENST00000507476 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
LINC01088-203ENST00000507476 ZNF454Q8N9F8 522 aa13.93□□□□□ -0.18
LINC01088-203ENST00000507476 FOSBP53539 338 aa13.91□□□□□ -0.18
LINC01088-203ENST00000507476 MAP3K9P80192 1104 aa13.9□□□□□ -0.18
LINC01088-203ENST00000507476 SPRYD3Q8NCJ5 442 aa13.9□□□□□ -0.18
LINC01088-203ENST00000507476 KCNK17Q96T54 332 aa13.9□□□□□ -0.18
LINC01088-203ENST00000507476 TK2O00142 265 aa13.88□□□□□ -0.19
LINC01088-203ENST00000507476 CAMK2BQ13554 666 aa13.87□□□□□ -0.19
LINC01088-203ENST00000507476 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
LINC01088-203ENST00000507476 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
LINC01088-203ENST00000507476 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
LINC01088-203ENST00000507476 HRO43593 1189 aa13.86□□□□□ -0.19
LINC01088-203ENST00000507476 KCNH8Q96L42 1107 aa13.81□□□□□ -0.2
LINC01088-203ENST00000507476 ADAM33Q9BZ11 813 aa13.81□□□□□ -0.2
LINC01088-203ENST00000507476 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
LINC01088-203ENST00000507476 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
LINC01088-203ENST00000507476 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
LINC01088-203ENST00000507476 VPS9D1Q9Y2B5 631 aa13.79□□□□□ -0.2
LINC01088-203ENST00000507476 DPYSL4O14531 572 aa13.78□□□□□ -0.2
LINC01088-203ENST00000507476 PTPREP23469 700 aa13.78□□□□□ -0.2
LINC01088-203ENST00000507476 PCDHGA10Q9Y5H3 936 aa13.77□□□□□ -0.21
LINC01088-203ENST00000507476 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
LINC01088-203ENST00000507476 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
LINC01088-203ENST00000507476 PHF14O94880 888 aa13.71□□□□□ -0.21
LINC01088-203ENST00000507476 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
LINC01088-203ENST00000507476 BHMG1C9JSJ3 638 aaPredicted RBP13.68□□□□□ -0.22
LINC01088-203ENST00000507476 STAC3Q96MF2 364 aa13.68□□□□□ -0.22
LINC01088-203ENST00000507476 HCSTQ9UBK5 93 aa13.68□□□□□ -0.22
LINC01088-203ENST00000507476 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
LINC01088-203ENST00000507476 KCTD12Q96CX2 325 aaKnown RBP13.67□□□□□ -0.22
LINC01088-203ENST00000507476 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
LINC01088-203ENST00000507476 COL9A1P20849 921 aa13.65□□□□□ -0.22
LINC01088-203ENST00000507476 PDIA6Q15084 440 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms