RNA–Protein interactions for RNA: ENST00000507179.1

SKI-203, Transcript of SKI proto-oncogene, humanhuman

TSL 2

Gene SKI, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-203ENST00000507179 MADDQ8WXG6 1647 aa21.08■□□□□ 0.97
SKI-203ENST00000507179 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
SKI-203ENST00000507179 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
SKI-203ENST00000507179 ILDR1Q86SU0 546 aaPredicted RBP21.06■□□□□ 0.96
SKI-203ENST00000507179 MAGI2Q86UL8 1455 aa21.05■□□□□ 0.96
SKI-203ENST00000507179 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
SKI-203ENST00000507179 PCF11O94913 1555 aaKnown RBP21.04■□□□□ 0.96
SKI-203ENST00000507179 MYO5CQ9NQX4 1742 aa21.04■□□□□ 0.96
SKI-203ENST00000507179 CLIP1P30622 1438 aa21.01■□□□□ 0.95
SKI-203ENST00000507179 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
SKI-203ENST00000507179 AFAP1Q8N556 730 aa20.99■□□□□ 0.95
SKI-203ENST00000507179 RIMS1Q86UR5 1692 aaKnown RBP20.99■□□□□ 0.95
SKI-203ENST00000507179 ATP10AO60312 1499 aa20.97■□□□□ 0.95
SKI-203ENST00000507179 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
SKI-203ENST00000507179 MLECQ14165 292 aa20.97■□□□□ 0.95
SKI-203ENST00000507179 LMTK3Q96Q04 1460 aa20.95■□□□□ 0.94
SKI-203ENST00000507179 ZNF518AQ6AHZ1 1483 aa20.94■□□□□ 0.94
SKI-203ENST00000507179 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
SKI-203ENST00000507179 CDC42BPBQ9Y5S2 1711 aa20.94■□□□□ 0.94
SKI-203ENST00000507179 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
SKI-203ENST00000507179 KDM5CP41229 1560 aa20.93■□□□□ 0.94
SKI-203ENST00000507179 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
SKI-203ENST00000507179 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
SKI-203ENST00000507179 TRAPPC8Q9Y2L5 1435 aa20.91■□□□□ 0.94
SKI-203ENST00000507179 PREX2Q70Z35 1606 aa20.89■□□□□ 0.94
SKI-203ENST00000507179 ABCC1P33527 1531 aa20.88■□□□□ 0.93
SKI-203ENST00000507179 HSPA2P54652 639 aa20.87■□□□□ 0.93
SKI-203ENST00000507179 DIP2CQ9Y2E4 1556 aa20.86■□□□□ 0.93
SKI-203ENST00000507179 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
SKI-203ENST00000507179 MLH3Q9UHC1 1453 aa20.85■□□□□ 0.93
SKI-203ENST00000507179 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
SKI-203ENST00000507179 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
SKI-203ENST00000507179 ABCA6Q8N139 1617 aa20.83■□□□□ 0.93
SKI-203ENST00000507179 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
SKI-203ENST00000507179 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.92
SKI-203ENST00000507179 ITSN2Q9NZM3 1697 aa20.82■□□□□ 0.92
SKI-203ENST00000507179 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
SKI-203ENST00000507179 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
SKI-203ENST00000507179 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
SKI-203ENST00000507179 KIDINS220Q9ULH0 1771 aa20.77■□□□□ 0.92
SKI-203ENST00000507179 HNRNPMP52272 730 aaKnown RBP eCLIP20.77■□□□□ 0.92
SKI-203ENST00000507179 AGLP35573 1532 aa20.75■□□□□ 0.91
SKI-203ENST00000507179 SYCP2Q9BX26 1530 aa20.75■□□□□ 0.91
SKI-203ENST00000507179 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
SKI-203ENST00000507179 CFDP1Q9UEE9 299 aaPredicted RBP20.73■□□□□ 0.91
SKI-203ENST00000507179 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
SKI-203ENST00000507179 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
SKI-203ENST00000507179 FBXO41Q8TF61 875 aa20.71■□□□□ 0.91
SKI-203ENST00000507179 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
SKI-203ENST00000507179 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.9
SKI-203ENST00000507179 ZNF644Q9H582 1327 aaPredicted RBP20.7■□□□□ 0.9
SKI-203ENST00000507179 PREX1Q8TCU6 1659 aa20.67■□□□□ 0.9
SKI-203ENST00000507179 TIAM1Q13009 1591 aa20.67■□□□□ 0.9
SKI-203ENST00000507179 C3P01024 1663 aa20.65■□□□□ 0.9
SKI-203ENST00000507179 PLEKHH2Q8IVE3 1493 aa20.65■□□□□ 0.9
SKI-203ENST00000507179 LOC105371045A0A1W2PR82 267 aa20.65■□□□□ 0.9
SKI-203ENST00000507179 ATP7AQ04656 1500 aa20.64■□□□□ 0.9
SKI-203ENST00000507179 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.9
SKI-203ENST00000507179 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
SKI-203ENST00000507179 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
SKI-203ENST00000507179 UHRF1BP1Q6BDS2 1440 aa20.62■□□□□ 0.89
SKI-203ENST00000507179 ESF1Q9H501 851 aaKnown RBP20.61■□□□□ 0.89
SKI-203ENST00000507179 PLXNC1O60486 1568 aa20.6■□□□□ 0.89
SKI-203ENST00000507179 CNTLNQ9NXG0 1405 aa20.6■□□□□ 0.89
SKI-203ENST00000507179 A2MP01023 1474 aa20.59■□□□□ 0.89
SKI-203ENST00000507179 STRCQ7RTU9 1775 aa20.59■□□□□ 0.89
SKI-203ENST00000507179 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.89
SKI-203ENST00000507179 NCOA2Q15596 1464 aa20.57■□□□□ 0.88
SKI-203ENST00000507179 ZMYM3Q14202 1370 aa20.57■□□□□ 0.88
SKI-203ENST00000507179 SETD1BQ9UPS6 1966 aaKnown RBP20.56■□□□□ 0.88
SKI-203ENST00000507179 CERKQ8TCT0 537 aa20.55■□□□□ 0.88
SKI-203ENST00000507179 GGT6Q6P531 493 aa20.52■□□□□ 0.88
SKI-203ENST00000507179 RTEL1-TNFRSF6BF6WH68 1400 aa20.52■□□□□ 0.87
SKI-203ENST00000507179 NPATQ14207 1427 aa20.52■□□□□ 0.87
SKI-203ENST00000507179 VPS8Q8N3P4 1428 aa20.52■□□□□ 0.87
SKI-203ENST00000507179 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
SKI-203ENST00000507179 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
SKI-203ENST00000507179 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
SKI-203ENST00000507179 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
SKI-203ENST00000507179 ADGBQ8N7X0 1667 aa20.48■□□□□ 0.87
SKI-203ENST00000507179 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
SKI-203ENST00000507179 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
SKI-203ENST00000507179 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
SKI-203ENST00000507179 PTPRKQ15262 1439 aa20.47■□□□□ 0.87
SKI-203ENST00000507179 NCOA1Q15788 1441 aa20.47■□□□□ 0.87
SKI-203ENST00000507179 CCDC141Q6ZP82 1450 aa20.47■□□□□ 0.87
SKI-203ENST00000507179 PTPRTO14522 1441 aa20.46■□□□□ 0.87
SKI-203ENST00000507179 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
SKI-203ENST00000507179 CAMSAP1Q5T5Y3 1602 aa20.42■□□□□ 0.86
SKI-203ENST00000507179 KIF3BO15066 747 aa20.42■□□□□ 0.86
SKI-203ENST00000507179 RSPH4AQ5TD94 716 aa20.41■□□□□ 0.86
SKI-203ENST00000507179 NCKAP5LQ9HCH0 1330 aa20.4■□□□□ 0.86
SKI-203ENST00000507179 MYO3AQ8NEV4 1616 aa20.39■□□□□ 0.86
SKI-203ENST00000507179 ARHGEF5Q12774 1597 aa20.39■□□□□ 0.85
SKI-203ENST00000507179 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
SKI-203ENST00000507179 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
SKI-203ENST00000507179 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
SKI-203ENST00000507179 CEP170BQ9Y4F5 1589 aaPredicted RBP20.37■□□□□ 0.85
SKI-203ENST00000507179 ZNF142P52746 1687 aaPredicted RBP20.36■□□□□ 0.85
SKI-203ENST00000507179 TSPY4P0CV99 314 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms