RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 CDC42BPBQ9Y5S2 1711 aa31.34■■■□□ 2.61
DDR1-259ENST00000507046 CDC42BPAQ5VT25 1732 aa31.33■■■□□ 2.61
DDR1-259ENST00000507046 FRMPD1Q5SYB0 1578 aa31.3■■■□□ 2.6
DDR1-259ENST00000507046 SUPT6HQ7KZ85 1726 aaKnown RBP31.29■■■□□ 2.6
DDR1-259ENST00000507046 RAPGEF3O95398 923 aa31.29■■■□□ 2.6
DDR1-259ENST00000507046 CCNB3Q8WWL7 1395 aa31.29■■■□□ 2.6
DDR1-259ENST00000507046 LRRC9Q6ZRR7 1453 aa31.28■■■□□ 2.6
DDR1-259ENST00000507046 APLP2Q06481 763 aa31.28■■■□□ 2.6
DDR1-259ENST00000507046 RICTORQ6R327 1708 aa31.27■■■□□ 2.6
DDR1-259ENST00000507046 GPATCH8Q9UKJ3 1502 aaKnown RBP31.27■■■□□ 2.6
DDR1-259ENST00000507046 SCAPERQ9BY12 1400 aa31.26■■■□□ 2.6
DDR1-259ENST00000507046 ITSN2Q9NZM3 1697 aa31.24■■■□□ 2.59
DDR1-259ENST00000507046 POGZQ7Z3K3 1410 aa31.23■■■□□ 2.59
DDR1-259ENST00000507046 NCOA2Q15596 1464 aa31.22■■■□□ 2.59
DDR1-259ENST00000507046 ABCC1P33527 1531 aa31.19■■■□□ 2.58
DDR1-259ENST00000507046 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
DDR1-259ENST00000507046 CFDP1Q9UEE9 299 aaPredicted RBP31.17■■■□□ 2.58
DDR1-259ENST00000507046 ZNF518AQ6AHZ1 1483 aa31.16■■■□□ 2.58
DDR1-259ENST00000507046 SAMD9LQ8IVG5 1584 aa31.15■■■□□ 2.58
DDR1-259ENST00000507046 KANK4Q5T7N3 995 aaPredicted RBP31.15■■■□□ 2.58
DDR1-259ENST00000507046 ZNF777Q9ULD5 760 aaPredicted RBP31.15■■■□□ 2.58
DDR1-259ENST00000507046 ARHGEF40Q8TER5 1519 aa31.13■■■□□ 2.57
DDR1-259ENST00000507046 MAGI2Q86UL8 1455 aa31.12■■■□□ 2.57
DDR1-259ENST00000507046 PLEKHH2Q8IVE3 1493 aa31.12■■■□□ 2.57
DDR1-259ENST00000507046 KDM5CP41229 1560 aa31.09■■■□□ 2.57
DDR1-259ENST00000507046 ZFYVE16Q7Z3T8 1539 aa31.09■■■□□ 2.57
DDR1-259ENST00000507046 SYCP2Q9BX26 1530 aa31.08■■■□□ 2.57
DDR1-259ENST00000507046 ARHGEF12Q9NZN5 1544 aa31.08■■■□□ 2.57
DDR1-259ENST00000507046 KIAA1107Q9UPP5 1409 aa31.06■■■□□ 2.56
DDR1-259ENST00000507046 TRAPPC8Q9Y2L5 1435 aa31.05■■■□□ 2.56
DDR1-259ENST00000507046 HECW2Q9P2P5 1572 aa31.04■■■□□ 2.56
DDR1-259ENST00000507046 AFAP1Q8N556 730 aa31.03■■■□□ 2.56
DDR1-259ENST00000507046 YEATS2Q9ULM3 1422 aa31.02■■■□□ 2.56
DDR1-259ENST00000507046 MYOM3Q5VTT5 1437 aa30.98■■■□□ 2.55
DDR1-259ENST00000507046 CAMSAP2Q08AD1 1489 aa30.98■■■□□ 2.55
DDR1-259ENST00000507046 MYT1LQ9UL68 1186 aa30.98■■■□□ 2.55
DDR1-259ENST00000507046 MLH3Q9UHC1 1453 aa30.97■■■□□ 2.55
DDR1-259ENST00000507046 HNRNPMP52272 730 aaKnown RBP eCLIP30.97■■■□□ 2.55
DDR1-259ENST00000507046 ZNF644Q9H582 1327 aaPredicted RBP30.96■■■□□ 2.55
DDR1-259ENST00000507046 MIA2Q96PC5 1412 aa30.93■■■□□ 2.54
DDR1-259ENST00000507046 KDM4FA0A1W2PPD8 638 aa30.92■■■□□ 2.54
DDR1-259ENST00000507046 ATP10AO60312 1499 aa30.92■■■□□ 2.54
DDR1-259ENST00000507046 C9orf84Q5VXU9 1444 aa30.91■■■□□ 2.54
DDR1-259ENST00000507046 AEBP2Q6ZN18 517 aaPredicted RBP30.91■■■□□ 2.54
DDR1-259ENST00000507046 ARID4BQ4LE39 1312 aaPredicted RBP30.91■■■□□ 2.54
DDR1-259ENST00000507046 MBD5Q9P267 1494 aa30.9■■■□□ 2.54
DDR1-259ENST00000507046 DIP2CQ9Y2E4 1556 aa30.9■■■□□ 2.54
DDR1-259ENST00000507046 ABCA6Q8N139 1617 aa30.89■■■□□ 2.54
DDR1-259ENST00000507046 SPAG9O60271 1321 aaKnown RBP30.89■■■□□ 2.54
DDR1-259ENST00000507046 KIDINS220Q9ULH0 1771 aa30.88■■■□□ 2.53
DDR1-259ENST00000507046 CCDC141Q6ZP82 1450 aa30.86■■■□□ 2.53
DDR1-259ENST00000507046 ATP7AQ04656 1500 aa30.86■■■□□ 2.53
DDR1-259ENST00000507046 INO80Q9ULG1 1556 aaPredicted RBP30.86■■■□□ 2.53
DDR1-259ENST00000507046 ARHGEF5Q12774 1597 aa30.84■■■□□ 2.53
DDR1-259ENST00000507046 REREQ9P2R6 1566 aa30.83■■■□□ 2.53
DDR1-259ENST00000507046 RSPH4AQ5TD94 716 aa30.83■■■□□ 2.53
DDR1-259ENST00000507046 BCORL1Q5H9F3 1711 aa30.83■■■□□ 2.53
DDR1-259ENST00000507046 SIGLEC1Q9BZZ2 1709 aa30.81■■■□□ 2.52
DDR1-259ENST00000507046 FGD6Q6ZV73 1430 aa30.81■■■□□ 2.52
DDR1-259ENST00000507046 PTPN23Q9H3S7 1636 aa30.8■■■□□ 2.52
DDR1-259ENST00000507046 ADAMTSL3P82987 1691 aa30.77■■■□□ 2.52
DDR1-259ENST00000507046 RTEL1-TNFRSF6BF6WH68 1400 aa30.76■■■□□ 2.51
DDR1-259ENST00000507046 TCOF1Q13428 1488 aaKnown RBP30.73■■■□□ 2.51
DDR1-259ENST00000507046 AGLP35573 1532 aa30.72■■■□□ 2.51
DDR1-259ENST00000507046 TSPY4P0CV99 314 aa30.71■■■□□ 2.51
DDR1-259ENST00000507046 TSPY10P0CW01 314 aa30.71■■■□□ 2.51
DDR1-259ENST00000507046 ADGBQ8N7X0 1667 aa30.71■■■□□ 2.51
DDR1-259ENST00000507046 MADDQ8WXG6 1647 aa30.7■■■□□ 2.51
DDR1-259ENST00000507046 MLECQ14165 292 aa30.68■■■□□ 2.5
DDR1-259ENST00000507046 A2MP01023 1474 aa30.68■■■□□ 2.5
DDR1-259ENST00000507046 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
DDR1-259ENST00000507046 PLXNC1O60486 1568 aa30.66■■■□□ 2.5
DDR1-259ENST00000507046 PPARGC1BQ86YN6 1023 aaKnown RBP30.65■■■□□ 2.5
DDR1-259ENST00000507046 DNMT1P26358 1616 aaKnown RBP30.64■■■□□ 2.5
DDR1-259ENST00000507046 CROCC2H7BZ55 1655 aa30.64■■■□□ 2.5
DDR1-259ENST00000507046 FER1L4A9Z1Z3 1794 aa30.63■■■□□ 2.49
DDR1-259ENST00000507046 SHANK2Q9UPX8 1470 aa30.63■■■□□ 2.49
DDR1-259ENST00000507046 RIMS1Q86UR5 1692 aaKnown RBP30.62■■■□□ 2.49
DDR1-259ENST00000507046 PTPRMP28827 1452 aa30.6■■■□□ 2.49
DDR1-259ENST00000507046 DAPK1P53355 1430 aa30.6■■■□□ 2.49
DDR1-259ENST00000507046 ABCC5O15440 1437 aa30.59■■■□□ 2.49
DDR1-259ENST00000507046 FAM50AQ14320 339 aaKnown RBP30.58■■■□□ 2.49
DDR1-259ENST00000507046 DHX29Q7Z478 1369 aaKnown RBP30.56■■■□□ 2.48
DDR1-259ENST00000507046 ESF1Q9H501 851 aaKnown RBP30.5■■■□□ 2.47
DDR1-259ENST00000507046 DUOX2Q9NRD8 1548 aa30.46■■■□□ 2.47
DDR1-259ENST00000507046 CNTLNQ9NXG0 1405 aa30.46■■■□□ 2.47
DDR1-259ENST00000507046 KIF15Q9NS87 1388 aa30.44■■■□□ 2.46
DDR1-259ENST00000507046 ANKRD30AQ9BXX3 1397 aa30.43■■■□□ 2.46
DDR1-259ENST00000507046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.43■■■□□ 2.46
DDR1-259ENST00000507046 KIF3BO15066 747 aa30.43■■■□□ 2.46
DDR1-259ENST00000507046 GGT6Q6P531 493 aa30.43■■■□□ 2.46
DDR1-259ENST00000507046 EIF2AK4Q9P2K8 1649 aaKnown RBP30.43■■■□□ 2.46
DDR1-259ENST00000507046 CHIC2Q9UKJ5 165 aa30.41■■■□□ 2.46
DDR1-259ENST00000507046 ADGRL2O95490 1459 aa30.4■■■□□ 2.46
DDR1-259ENST00000507046 PLPPR3Q6T4P5 718 aa30.4■■■□□ 2.46
DDR1-259ENST00000507046 RRBP1Q9P2E9 1410 aaKnown RBP30.39■■■□□ 2.46
DDR1-259ENST00000507046 PPP6R1Q9UPN7 881 aa30.39■■■□□ 2.46
DDR1-259ENST00000507046 RRP7BPQ9NSQ0 103 aa30.38■■■□□ 2.45
DDR1-259ENST00000507046 MROH2AA6NES4 1674 aa30.38■■■□□ 2.45
DDR1-259ENST00000507046 ERBINQ96RT1 1412 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms