RNA–Protein interactions for RNA: ENST00000507012.1

RERE-217, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-217ENST00000507012 LOC105371045A0A1W2PR82 267 aa17.49■□□□□ 0.39
RERE-217ENST00000507012 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
RERE-217ENST00000507012 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
RERE-217ENST00000507012 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
RERE-217ENST00000507012 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
RERE-217ENST00000507012 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
RERE-217ENST00000507012 VPS8Q8N3P4 1428 aa17.45■□□□□ 0.38
RERE-217ENST00000507012 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
RERE-217ENST00000507012 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
RERE-217ENST00000507012 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
RERE-217ENST00000507012 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
RERE-217ENST00000507012 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
RERE-217ENST00000507012 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
RERE-217ENST00000507012 ABCC1P33527 1531 aa17.39■□□□□ 0.37
RERE-217ENST00000507012 GPATCH8Q9UKJ3 1502 aaKnown RBP17.39■□□□□ 0.37
RERE-217ENST00000507012 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
RERE-217ENST00000507012 KDM5CP41229 1560 aa17.38■□□□□ 0.37
RERE-217ENST00000507012 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
RERE-217ENST00000507012 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
RERE-217ENST00000507012 ARID4BQ4LE39 1312 aaPredicted RBP17.37■□□□□ 0.37
RERE-217ENST00000507012 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
RERE-217ENST00000507012 YEATS2Q9ULM3 1422 aa17.35■□□□□ 0.37
RERE-217ENST00000507012 KIAA1107Q9UPP5 1409 aa17.35■□□□□ 0.37
RERE-217ENST00000507012 ATP10AO60312 1499 aa17.35■□□□□ 0.37
RERE-217ENST00000507012 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
RERE-217ENST00000507012 HECW2Q9P2P5 1572 aa17.34■□□□□ 0.37
RERE-217ENST00000507012 MLH3Q9UHC1 1453 aa17.34■□□□□ 0.37
RERE-217ENST00000507012 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.36
RERE-217ENST00000507012 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
RERE-217ENST00000507012 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.36
RERE-217ENST00000507012 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.36
RERE-217ENST00000507012 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
RERE-217ENST00000507012 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
RERE-217ENST00000507012 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
RERE-217ENST00000507012 ARHGEF12Q9NZN5 1544 aa17.31■□□□□ 0.36
RERE-217ENST00000507012 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
RERE-217ENST00000507012 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
RERE-217ENST00000507012 NCOA2Q15596 1464 aa17.3■□□□□ 0.36
RERE-217ENST00000507012 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
RERE-217ENST00000507012 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
RERE-217ENST00000507012 APLP2Q06481 763 aa17.29■□□□□ 0.36
RERE-217ENST00000507012 SYCP2Q9BX26 1530 aa17.29■□□□□ 0.36
RERE-217ENST00000507012 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
RERE-217ENST00000507012 PTPRMP28827 1452 aa17.25■□□□□ 0.35
RERE-217ENST00000507012 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
RERE-217ENST00000507012 HNRNPMP52272 730 aaKnown RBP eCLIP17.24■□□□□ 0.353e-7■■■■□ 26.3
RERE-217ENST00000507012 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
RERE-217ENST00000507012 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
RERE-217ENST00000507012 AGLP35573 1532 aa17.23■□□□□ 0.35
RERE-217ENST00000507012 ABCA6Q8N139 1617 aa17.23■□□□□ 0.35
RERE-217ENST00000507012 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
RERE-217ENST00000507012 ATP7AQ04656 1500 aa17.21■□□□□ 0.34
RERE-217ENST00000507012 SIGLEC1Q9BZZ2 1709 aa17.2■□□□□ 0.34
RERE-217ENST00000507012 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
RERE-217ENST00000507012 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
RERE-217ENST00000507012 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
RERE-217ENST00000507012 MIA2Q96PC5 1412 aa17.19■□□□□ 0.34
RERE-217ENST00000507012 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
RERE-217ENST00000507012 RIMS1Q86UR5 1692 aaKnown RBP17.18■□□□□ 0.34
RERE-217ENST00000507012 MLECQ14165 292 aa17.18■□□□□ 0.34
RERE-217ENST00000507012 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
RERE-217ENST00000507012 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
RERE-217ENST00000507012 CCDC141Q6ZP82 1450 aa17.18■□□□□ 0.34
RERE-217ENST00000507012 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
RERE-217ENST00000507012 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
RERE-217ENST00000507012 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
RERE-217ENST00000507012 A2MP01023 1474 aa17.13■□□□□ 0.33
RERE-217ENST00000507012 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
RERE-217ENST00000507012 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
RERE-217ENST00000507012 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
RERE-217ENST00000507012 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
RERE-217ENST00000507012 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
RERE-217ENST00000507012 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
RERE-217ENST00000507012 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
RERE-217ENST00000507012 DHX29Q7Z478 1369 aaKnown RBP17.07■□□□□ 0.32
RERE-217ENST00000507012 MAST1Q9Y2H9 1570 aa17.06■□□□□ 0.32
RERE-217ENST00000507012 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
RERE-217ENST00000507012 LMTK3Q96Q04 1460 aa17.04■□□□□ 0.32
RERE-217ENST00000507012 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
RERE-217ENST00000507012 FAM135AQ9P2D6 1515 aa17.03■□□□□ 0.32
RERE-217ENST00000507012 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
RERE-217ENST00000507012 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
RERE-217ENST00000507012 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.32
RERE-217ENST00000507012 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.32
RERE-217ENST00000507012 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
RERE-217ENST00000507012 NPATQ14207 1427 aa17■□□□□ 0.31
RERE-217ENST00000507012 PREX1Q8TCU6 1659 aa17■□□□□ 0.31
RERE-217ENST00000507012 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
RERE-217ENST00000507012 GGT6Q6P531 493 aa16.99■□□□□ 0.31
RERE-217ENST00000507012 C3P01024 1663 aa16.99■□□□□ 0.31
RERE-217ENST00000507012 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
RERE-217ENST00000507012 KIF3BO15066 747 aa16.98■□□□□ 0.31
RERE-217ENST00000507012 ZMYM3Q14202 1370 aa16.98■□□□□ 0.31
RERE-217ENST00000507012 ABCC5O15440 1437 aa16.96■□□□□ 0.31
RERE-217ENST00000507012 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.31
RERE-217ENST00000507012 DAPK1P53355 1430 aa16.96■□□□□ 0.3
RERE-217ENST00000507012 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
RERE-217ENST00000507012 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
RERE-217ENST00000507012 DUOX2Q9NRD8 1548 aa16.95■□□□□ 0.3
RERE-217ENST00000507012 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms