RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ADGRD1Q6QNK2 874 aa10.26□□□□□ -0.77
TOPBP1-205ENST00000506779 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
TOPBP1-205ENST00000506779 EFCAB3Q8N7B9 438 aa10.21□□□□□ -0.77
TOPBP1-205ENST00000506779 KCTD12Q96CX2 325 aaKnown RBP10.19□□□□□ -0.78
TOPBP1-205ENST00000506779 NUDT7P0C024 238 aa10.18□□□□□ -0.78
TOPBP1-205ENST00000506779 IFFO2Q5TF58 517 aa10.17□□□□□ -0.78
TOPBP1-205ENST00000506779 LHX6Q9UPM6 363 aa10.17□□□□□ -0.78
TOPBP1-205ENST00000506779 KLHL34Q8N239 644 aa10.16□□□□□ -0.78
TOPBP1-205ENST00000506779 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
TOPBP1-205ENST00000506779 HRO43593 1189 aa10.15□□□□□ -0.78
TOPBP1-205ENST00000506779 A0A0G2JS52 829 aa10.13□□□□□ -0.79
TOPBP1-205ENST00000506779 TK2O00142 265 aa10.13□□□□□ -0.79
TOPBP1-205ENST00000506779 Q6ZNB5 142 aa10.13□□□□□ -0.79
TOPBP1-205ENST00000506779 MS4A4AQ96JQ5 239 aa10.08□□□□□ -0.8
TOPBP1-205ENST00000506779 PTPN5P54829 565 aa10.07□□□□□ -0.8
TOPBP1-205ENST00000506779 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
TOPBP1-205ENST00000506779 STAC3Q96MF2 364 aa10.04□□□□□ -0.8
TOPBP1-205ENST00000506779 SOX12O15370 315 aa10.03□□□□□ -0.8
TOPBP1-205ENST00000506779 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
TOPBP1-205ENST00000506779 PSEN2P49810 448 aa10.02□□□□□ -0.81
TOPBP1-205ENST00000506779 FBXO3Q9UK99 471 aa10.01□□□□□ -0.81
TOPBP1-205ENST00000506779 PSDA5PKW4 1024 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-205ENST00000506779 SLC34A2O95436 690 aa9.98□□□□□ -0.81
TOPBP1-205ENST00000506779 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
TOPBP1-205ENST00000506779 PHF8Q9UPP1 1060 aa9.98□□□□□ -0.81
TOPBP1-205ENST00000506779 KIF3CO14782 793 aa9.96□□□□□ -0.82
TOPBP1-205ENST00000506779 C2orf72A6NCS6 295 aa9.94□□□□□ -0.82
TOPBP1-205ENST00000506779 LCE2BO14633 110 aa9.94□□□□□ -0.82
TOPBP1-205ENST00000506779 VASPP50552 380 aaPredicted RBP9.94□□□□□ -0.82
TOPBP1-205ENST00000506779 FKBP8Q14318 412 aa9.93□□□□□ -0.82
TOPBP1-205ENST00000506779 TRAF7Q6Q0C0 670 aa9.89□□□□□ -0.83
TOPBP1-205ENST00000506779 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
TOPBP1-205ENST00000506779 KDM4FA0A1W2PPD8 638 aa9.87□□□□□ -0.83
TOPBP1-205ENST00000506779 LAPTM4AQ15012 233 aa9.86□□□□□ -0.83
TOPBP1-205ENST00000506779 VPS9D1Q9Y2B5 631 aa9.86□□□□□ -0.83
TOPBP1-205ENST00000506779 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
TOPBP1-205ENST00000506779 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
TOPBP1-205ENST00000506779 KCNK17Q96T54 332 aa9.82□□□□□ -0.84
TOPBP1-205ENST00000506779 NLRP6P59044 892 aa9.81□□□□□ -0.84
TOPBP1-205ENST00000506779 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
TOPBP1-205ENST00000506779 KCNH8Q96L42 1107 aa9.79□□□□□ -0.84
TOPBP1-205ENST00000506779 WNT2BQ93097 391 aa9.78□□□□□ -0.84
TOPBP1-205ENST00000506779 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-205ENST00000506779 GFRA3O60609 400 aa9.77□□□□□ -0.85
TOPBP1-205ENST00000506779 ZFP91Q96JP5 570 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-205ENST00000506779 GOLGA8CPA6NN73 597 aa9.76□□□□□ -0.85
TOPBP1-205ENST00000506779 BHMG1C9JSJ3 638 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-205ENST00000506779 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
TOPBP1-205ENST00000506779 TRIM41Q8WV44 630 aa9.75□□□□□ -0.85
TOPBP1-205ENST00000506779 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
TOPBP1-205ENST00000506779 SLC4A5Q9BY07 1137 aa9.74□□□□□ -0.85
TOPBP1-205ENST00000506779 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
TOPBP1-205ENST00000506779 PTCD2Q8WV60 388 aaKnown RBP9.73□□□□□ -0.85
TOPBP1-205ENST00000506779 ZNF775Q96BV0 537 aaPredicted RBP9.73□□□□□ -0.85
TOPBP1-205ENST00000506779 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
TOPBP1-205ENST00000506779 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
TOPBP1-205ENST00000506779 MRPL50Q8N5N7 158 aaKnown RBP9.69□□□□□ -0.86
TOPBP1-205ENST00000506779 VGFO15240 615 aaPredicted RBP9.67□□□□□ -0.86
TOPBP1-205ENST00000506779 RNF25Q96BH1 459 aaPredicted RBP9.65□□□□□ -0.86
TOPBP1-205ENST00000506779 MFRPQ9BY79 579 aa9.64□□□□□ -0.87
TOPBP1-205ENST00000506779 NRG2O14511 850 aaPredicted RBP9.63□□□□□ -0.87
TOPBP1-205ENST00000506779 ZBED2Q9BTP6 218 aa9.61□□□□□ -0.87
TOPBP1-205ENST00000506779 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
TOPBP1-205ENST00000506779 KCNC4Q03721 635 aa9.6□□□□□ -0.87
TOPBP1-205ENST00000506779 TBC1D12O60347 775 aa9.58□□□□□ -0.88
TOPBP1-205ENST00000506779 NBPF3Q9H094 633 aa9.58□□□□□ -0.88
TOPBP1-205ENST00000506779 BCL11BQ9C0K0 894 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-205ENST00000506779 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
TOPBP1-205ENST00000506779 PTPREP23469 700 aa9.54□□□□□ -0.88
TOPBP1-205ENST00000506779 ANKK1Q8NFD2 765 aa9.54□□□□□ -0.88
TOPBP1-205ENST00000506779 PLPP6Q8IY26 295 aa9.53□□□□□ -0.88
TOPBP1-205ENST00000506779 BCAMP50895 628 aa9.51□□□□□ -0.89
TOPBP1-205ENST00000506779 NYAP1Q6ZVC0 841 aa9.51□□□□□ -0.89
TOPBP1-205ENST00000506779 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
TOPBP1-205ENST00000506779 FOXK1P85037 733 aa9.5□□□□□ -0.89
TOPBP1-205ENST00000506779 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
TOPBP1-205ENST00000506779 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
TOPBP1-205ENST00000506779 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
TOPBP1-205ENST00000506779 SOWAHBA6NEL2 793 aa9.47□□□□□ -0.89
TOPBP1-205ENST00000506779 FOSBP53539 338 aa9.46□□□□□ -0.9
TOPBP1-205ENST00000506779 WBP1LQ9NX94 342 aa9.46□□□□□ -0.9
TOPBP1-205ENST00000506779 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
TOPBP1-205ENST00000506779 V9GY48 417 aaPredicted RBP9.42□□□□□ -0.9
TOPBP1-205ENST00000506779 PPP1R37O75864 691 aa9.41□□□□□ -0.9
TOPBP1-205ENST00000506779 DSG2Q14126 1118 aa9.41□□□□□ -0.9
TOPBP1-205ENST00000506779 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
TOPBP1-205ENST00000506779 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
TOPBP1-205ENST00000506779 GPHNQ9NQX3 736 aaPredicted RBP9.4□□□□□ -0.9
TOPBP1-205ENST00000506779 ADAM33Q9BZ11 813 aa9.39□□□□□ -0.91
TOPBP1-205ENST00000506779 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
TOPBP1-205ENST00000506779 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
TOPBP1-205ENST00000506779 TREML4Q6UXN2 200 aa9.38□□□□□ -0.91
TOPBP1-205ENST00000506779 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
TOPBP1-205ENST00000506779 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
TOPBP1-205ENST00000506779 ZDHHC16Q969W1 377 aa9.36□□□□□ -0.91
TOPBP1-205ENST00000506779 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
TOPBP1-205ENST00000506779 POTECB2RU33 542 aa9.35□□□□□ -0.91
TOPBP1-205ENST00000506779 STK25O00506 426 aa9.35□□□□□ -0.91
TOPBP1-205ENST00000506779 UPF1Q92900 1129 aaKnown RBP eCLIP9.35□□□□□ -0.91
TOPBP1-205ENST00000506779 JPH4Q96JJ6 628 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms