RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 ZNF692Q9BU19 519 aaPredicted RBP9.2□□□□□ -0.94
USP46-206ENST00000506707 CLIP1P30622 1438 aa9.2□□□□□ -0.94
USP46-206ENST00000506707 ABCC2Q92887 1545 aa9.19□□□□□ -0.94
USP46-206ENST00000506707 ABCA8O94911 1581 aa9.19□□□□□ -0.94
USP46-206ENST00000506707 KDM5BQ9UGL1 1544 aa9.18□□□□□ -0.94
USP46-206ENST00000506707 CEP162Q5TB80 1403 aa9.17□□□□□ -0.94
USP46-206ENST00000506707 ARID3CA6NKF2 412 aa9.17□□□□□ -0.94
USP46-206ENST00000506707 ATP10BO94823 1461 aa9.16□□□□□ -0.94
USP46-206ENST00000506707 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
USP46-206ENST00000506707 MKRN4PQ13434 485 aaPredicted RBP9.16□□□□□ -0.94
USP46-206ENST00000506707 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
USP46-206ENST00000506707 NUP153P49790 1475 aaKnown RBP9.15□□□□□ -0.95
USP46-206ENST00000506707 ASXL2Q76L83 1435 aa9.14□□□□□ -0.95
USP46-206ENST00000506707 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
USP46-206ENST00000506707 FAM69CQ0P6D2 419 aa9.13□□□□□ -0.95
USP46-206ENST00000506707 MAPKBP1O60336 1514 aa9.13□□□□□ -0.95
USP46-206ENST00000506707 RAPGEF6Q8TEU7 1601 aa9.12□□□□□ -0.95
USP46-206ENST00000506707 ABCC10Q5T3U5 1492 aa9.11□□□□□ -0.95
USP46-206ENST00000506707 PLEKHD1A6NEE1 506 aa9.11□□□□□ -0.95
USP46-206ENST00000506707 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
USP46-206ENST00000506707 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
USP46-206ENST00000506707 CASKIN1Q8WXD9 1431 aa9.11□□□□□ -0.95
USP46-206ENST00000506707 ZCCHC11Q5TAX3 1644 aaKnown RBP9.09□□□□□ -0.95
USP46-206ENST00000506707 EPRSP07814 1512 aaKnown RBP9.09□□□□□ -0.95
USP46-206ENST00000506707 WDR7Q9Y4E6 1490 aa9.08□□□□□ -0.96
USP46-206ENST00000506707 CDK13Q14004 1512 aaKnown RBP9.07□□□□□ -0.96
USP46-206ENST00000506707 CLCN6P51797 869 aa9.07□□□□□ -0.96
USP46-206ENST00000506707 CDK11AQ9UQ88 783 aaPredicted RBP9.07□□□□□ -0.96
USP46-206ENST00000506707 VPS8Q8N3P4 1428 aa9.06□□□□□ -0.96
USP46-206ENST00000506707 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
USP46-206ENST00000506707 FYCO1Q9BQS8 1478 aa9.06□□□□□ -0.96
USP46-206ENST00000506707 DIP2BQ9P265 1576 aa9.05□□□□□ -0.96
USP46-206ENST00000506707 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
USP46-206ENST00000506707 PCF11O94913 1555 aaKnown RBP9.04□□□□□ -0.96
USP46-206ENST00000506707 POTEIP0CG38 1075 aa9.04□□□□□ -0.96
USP46-206ENST00000506707 GLI2P10070 1586 aa9.03□□□□□ -0.96
USP46-206ENST00000506707 CCDC18Q5T9S5 1454 aa9.02□□□□□ -0.96
USP46-206ENST00000506707 TROQ12816 1431 aaPredicted RBP9.02□□□□□ -0.97
USP46-206ENST00000506707 CD109Q6YHK3 1445 aa9.02□□□□□ -0.97
USP46-206ENST00000506707 KIF13AQ9H1H9 1805 aa9.01□□□□□ -0.97
USP46-206ENST00000506707 KANK4Q5T7N3 995 aaPredicted RBP9.01□□□□□ -0.97
USP46-206ENST00000506707 MAGI3Q5TCQ9 1506 aa9□□□□□ -0.97
USP46-206ENST00000506707 LRRIQ1Q96JM4 1722 aa9□□□□□ -0.97
USP46-206ENST00000506707 PLSCR2Q9NRY7 297 aa9□□□□□ -0.97
USP46-206ENST00000506707 FARP1Q9Y4F1 1045 aaPredicted RBP9□□□□□ -0.97
USP46-206ENST00000506707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.98□□□□□ -0.97
USP46-206ENST00000506707 MTUS2Q5JR59 1369 aa8.98□□□□□ -0.97
USP46-206ENST00000506707 MAP3K4Q9Y6R4 1608 aa8.98□□□□□ -0.97
USP46-206ENST00000506707 DCBLD2Q96PD2 775 aa8.97□□□□□ -0.97
USP46-206ENST00000506707 ABCA9Q8IUA7 1624 aa8.97□□□□□ -0.97
USP46-206ENST00000506707 PLCH2O75038 1416 aa8.97□□□□□ -0.97
USP46-206ENST00000506707 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
USP46-206ENST00000506707 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.98
USP46-206ENST00000506707 EFCAB2Q5VUJ9 269 aa8.95□□□□□ -0.98
USP46-206ENST00000506707 LRRC9Q6ZRR7 1453 aa8.95□□□□□ -0.98
USP46-206ENST00000506707 TEX14Q8IWB6 1497 aa8.95□□□□□ -0.98
USP46-206ENST00000506707 TIAM1Q13009 1591 aa8.95□□□□□ -0.98
USP46-206ENST00000506707 KIF14Q15058 1648 aa8.94□□□□□ -0.98
USP46-206ENST00000506707 CFAP43Q8NDM7 1665 aa8.94□□□□□ -0.98
USP46-206ENST00000506707 PHLDB1Q86UU1 1377 aa8.94□□□□□ -0.98
USP46-206ENST00000506707 TTC37Q6PGP7 1564 aa8.94□□□□□ -0.98
USP46-206ENST00000506707 PPRC1Q5VV67 1664 aaKnown RBP8.94□□□□□ -0.98
USP46-206ENST00000506707 GPATCH8Q9UKJ3 1502 aaKnown RBP8.93□□□□□ -0.98
USP46-206ENST00000506707 TSPOAP1O95153 1857 aa8.92□□□□□ -0.98
USP46-206ENST00000506707 FANCAO15360 1455 aa8.92□□□□□ -0.98
USP46-206ENST00000506707 NEO1Q92859 1461 aa8.92□□□□□ -0.98
USP46-206ENST00000506707 AKNAQ7Z591 1439 aa8.92□□□□□ -0.98
USP46-206ENST00000506707 CCNB3Q8WWL7 1395 aa8.92□□□□□ -0.98
USP46-206ENST00000506707 RAPGEF3O95398 923 aa8.92□□□□□ -0.98
USP46-206ENST00000506707 ZNF579Q8NAF0 562 aaKnown RBP8.92□□□□□ -0.98
USP46-206ENST00000506707 CFDP1Q9UEE9 299 aaPredicted RBP8.92□□□□□ -0.98
USP46-206ENST00000506707 EHBP1L1Q8N3D4 1523 aa8.91□□□□□ -0.98
USP46-206ENST00000506707 ARAP3Q8WWN8 1544 aa8.9□□□□□ -0.98
USP46-206ENST00000506707 NCOA2Q15596 1464 aa8.9□□□□□ -0.98
USP46-206ENST00000506707 ZNF777Q9ULD5 760 aaPredicted RBP8.9□□□□□ -0.98
USP46-206ENST00000506707 ZNF644Q9H582 1327 aaPredicted RBP8.89□□□□□ -0.99
USP46-206ENST00000506707 PPARGC1BQ86YN6 1023 aaKnown RBP8.89□□□□□ -0.99
USP46-206ENST00000506707 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
USP46-206ENST00000506707 HNRNPMP52272 730 aaKnown RBP eCLIP8.88□□□□□ -0.991e-7■■■□□ 14.8
USP46-206ENST00000506707 AFAP1Q8N556 730 aa8.88□□□□□ -0.99
USP46-206ENST00000506707 ARHGAP5Q13017 1502 aa8.88□□□□□ -0.99
USP46-206ENST00000506707 DENND4BO75064 1496 aaPredicted RBP8.87□□□□□ -0.99
USP46-206ENST00000506707 KDM6BO15054 1643 aa8.87□□□□□ -0.99
USP46-206ENST00000506707 ADGRL1O94910 1474 aa8.86□□□□□ -0.99
USP46-206ENST00000506707 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
USP46-206ENST00000506707 CDC42BPBQ9Y5S2 1711 aa8.85□□□□□ -0.99
USP46-206ENST00000506707 ARHGEF12Q9NZN5 1544 aa8.85□□□□□ -0.99
USP46-206ENST00000506707 MYOM3Q5VTT5 1437 aa8.85□□□□□ -0.99
USP46-206ENST00000506707 KIAA1107Q9UPP5 1409 aa8.85□□□□□ -0.99
USP46-206ENST00000506707 TRAPPC8Q9Y2L5 1435 aa8.85□□□□□ -0.99
USP46-206ENST00000506707 SUPT6HQ7KZ85 1726 aaKnown RBP8.85□□□□□ -0.99
USP46-206ENST00000506707 MYO5CQ9NQX4 1742 aa8.85□□□□□ -0.99
USP46-206ENST00000506707 PREX2Q70Z35 1606 aa8.84□□□□□ -0.99
USP46-206ENST00000506707 CDC42BPAQ5VT25 1732 aa8.84□□□□□ -0.99
USP46-206ENST00000506707 MIA2Q96PC5 1412 aa8.84□□□□□ -0.99
USP46-206ENST00000506707 MBD5Q9P267 1494 aa8.83□□□□□ -1
USP46-206ENST00000506707 CFAP74Q9C0B2 1584 aa8.83□□□□□ -1
USP46-206ENST00000506707 POGZQ7Z3K3 1410 aa8.83□□□□□ -1
USP46-206ENST00000506707 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
USP46-206ENST00000506707 SAMD9LQ8IVG5 1584 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms