RNA–Protein interactions for RNA: ENST00000506237.5

SUB1-206, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SUB1, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-206ENST00000506237 C2orf72A6NCS6 295 aa9.99□□□□□ -0.81
SUB1-206ENST00000506237 KIF3CO14782 793 aa9.99□□□□□ -0.81
SUB1-206ENST00000506237 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
SUB1-206ENST00000506237 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
SUB1-206ENST00000506237 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
SUB1-206ENST00000506237 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
SUB1-206ENST00000506237 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
SUB1-206ENST00000506237 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
SUB1-206ENST00000506237 ST18O60284 1047 aa9.95□□□□□ -0.82
SUB1-206ENST00000506237 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
SUB1-206ENST00000506237 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.95□□□□□ -0.82
SUB1-206ENST00000506237 NCKAP5LQ9HCH0 1330 aa9.91□□□□□ -0.82
SUB1-206ENST00000506237 SNPHO15079 494 aa9.9□□□□□ -0.82
SUB1-206ENST00000506237 TMC2Q8TDI7 906 aa9.9□□□□□ -0.82
SUB1-206ENST00000506237 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
SUB1-206ENST00000506237 DSG2Q14126 1118 aa9.89□□□□□ -0.83
SUB1-206ENST00000506237 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
SUB1-206ENST00000506237 FOXK1P85037 733 aa9.86□□□□□ -0.83
SUB1-206ENST00000506237 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
SUB1-206ENST00000506237 MARVELD3Q96A59 401 aa9.85□□□□□ -0.83
SUB1-206ENST00000506237 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
SUB1-206ENST00000506237 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.835e-7■■□□□ 12.3
SUB1-206ENST00000506237 LARP6Q9BRS8 491 aaKnown RBP9.84□□□□□ -0.83
SUB1-206ENST00000506237 PDE4AP27815 886 aa9.83□□□□□ -0.84
SUB1-206ENST00000506237 DOK7Q18PE1 504 aa9.83□□□□□ -0.84
SUB1-206ENST00000506237 GPR153Q6NV75 609 aa9.82□□□□□ -0.84
SUB1-206ENST00000506237 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
SUB1-206ENST00000506237 ARSIQ5FYB1 569 aa9.81□□□□□ -0.84
SUB1-206ENST00000506237 ZNF710Q8N1W2 664 aa9.81□□□□□ -0.84
SUB1-206ENST00000506237 POTEB3A0JP26 581 aa9.8□□□□□ -0.84
SUB1-206ENST00000506237 POTEBQ6S5H4 581 aa9.8□□□□□ -0.84
SUB1-206ENST00000506237 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
SUB1-206ENST00000506237 SLC34A2O95436 690 aa9.78□□□□□ -0.84
SUB1-206ENST00000506237 PPP1R15BQ5SWA1 713 aa9.78□□□□□ -0.84
SUB1-206ENST00000506237 MFSD10Q14728 455 aa9.77□□□□□ -0.85
SUB1-206ENST00000506237 SPNS2Q8IVW8 549 aa9.77□□□□□ -0.85
SUB1-206ENST00000506237 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
SUB1-206ENST00000506237 PCDHGA4Q9Y5G9 962 aa9.76□□□□□ -0.85
SUB1-206ENST00000506237 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
SUB1-206ENST00000506237 RIMBP2O15034 1052 aa9.74□□□□□ -0.85
SUB1-206ENST00000506237 EMP3P54852 163 aa9.74□□□□□ -0.85
SUB1-206ENST00000506237 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
SUB1-206ENST00000506237 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
SUB1-206ENST00000506237 FAM205CA6NFA0 338 aa9.73□□□□□ -0.85
SUB1-206ENST00000506237 NUDT7P0C024 238 aa9.73□□□□□ -0.85
SUB1-206ENST00000506237 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
SUB1-206ENST00000506237 EMILIN3Q9NT22 766 aa9.72□□□□□ -0.85
SUB1-206ENST00000506237 KDM4FA0A1W2PPD8 638 aa9.71□□□□□ -0.86
SUB1-206ENST00000506237 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
SUB1-206ENST00000506237 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
SUB1-206ENST00000506237 ERBB3P21860 1342 aa9.67□□□□□ -0.86
SUB1-206ENST00000506237 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
SUB1-206ENST00000506237 CAMK2BQ13554 666 aa9.66□□□□□ -0.86
SUB1-206ENST00000506237 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
SUB1-206ENST00000506237 VARS2Q5ST30 1063 aaKnown RBP9.65□□□□□ -0.86
SUB1-206ENST00000506237 TBC1D12O60347 775 aa9.62□□□□□ -0.87
SUB1-206ENST00000506237 HAP1P54257 671 aaPredicted RBP9.61□□□□□ -0.87
SUB1-206ENST00000506237 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
SUB1-206ENST00000506237 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
SUB1-206ENST00000506237 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
SUB1-206ENST00000506237 DPYSL4O14531 572 aa9.59□□□□□ -0.87
SUB1-206ENST00000506237 EVI5O60447 810 aa9.59□□□□□ -0.87
SUB1-206ENST00000506237 E2F4Q16254 413 aa9.59□□□□□ -0.87
SUB1-206ENST00000506237 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
SUB1-206ENST00000506237 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
SUB1-206ENST00000506237 POTEEQ6S8J3 1075 aa9.58□□□□□ -0.88
SUB1-206ENST00000506237 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
SUB1-206ENST00000506237 ZNF687Q8N1G0 1237 aa9.57□□□□□ -0.88
SUB1-206ENST00000506237 AXIN2Q9Y2T1 843 aa9.53□□□□□ -0.88
SUB1-206ENST00000506237 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
SUB1-206ENST00000506237 FOSBP53539 338 aa9.5□□□□□ -0.89
SUB1-206ENST00000506237 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
SUB1-206ENST00000506237 ARIH1Q9Y4X5 557 aaPredicted RBP9.5□□□□□ -0.89
SUB1-206ENST00000506237 PCDHGA10Q9Y5H3 936 aa9.48□□□□□ -0.89
SUB1-206ENST00000506237 PSEN2P49810 448 aa9.47□□□□□ -0.89
SUB1-206ENST00000506237 DDX12PQ92771 950 aa9.47□□□□□ -0.89
SUB1-206ENST00000506237 PDIA6Q15084 440 aa9.46□□□□□ -0.9
SUB1-206ENST00000506237 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
SUB1-206ENST00000506237 PSDA5PKW4 1024 aaPredicted RBP9.45□□□□□ -0.9
SUB1-206ENST00000506237 PTGER2P43116 358 aa9.45□□□□□ -0.9
SUB1-206ENST00000506237 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
SUB1-206ENST00000506237 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
SUB1-206ENST00000506237 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
SUB1-206ENST00000506237 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
SUB1-206ENST00000506237 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
SUB1-206ENST00000506237 ZDHHC16Q969W1 377 aa9.43□□□□□ -0.9
SUB1-206ENST00000506237 ARHGAP33O14559 1287 aa9.42□□□□□ -0.9
SUB1-206ENST00000506237 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
SUB1-206ENST00000506237 ANKRD13DQ6ZTN6 518 aa9.42□□□□□ -0.9
SUB1-206ENST00000506237 VSIG10Q8N0Z9 540 aa9.42□□□□□ -0.9
SUB1-206ENST00000506237 PHF14O94880 888 aa9.41□□□□□ -0.9
SUB1-206ENST00000506237 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.93e-6■■■□□ 18.3
SUB1-206ENST00000506237 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
SUB1-206ENST00000506237 GRXCR2A6NFK2 248 aa9.4□□□□□ -0.9
SUB1-206ENST00000506237 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
SUB1-206ENST00000506237 PBX2P40425 430 aa9.39□□□□□ -0.91
SUB1-206ENST00000506237 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
SUB1-206ENST00000506237 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
SUB1-206ENST00000506237 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
SUB1-206ENST00000506237 COL9A1P20849 921 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms