RNA–Protein interactions for RNA: ENST00000506205.1

PDPN-207, Transcript of podoplanin, humanhuman

TSL 4

Gene PDPN, Length 476 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-207ENST00000506205 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.34
PDPN-207ENST00000506205 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
PDPN-207ENST00000506205 ZMYM4Q5VZL5 1548 aa17.18■□□□□ 0.34
PDPN-207ENST00000506205 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
PDPN-207ENST00000506205 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
PDPN-207ENST00000506205 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
PDPN-207ENST00000506205 RICTORQ6R327 1708 aa17.17■□□□□ 0.34
PDPN-207ENST00000506205 ZNF518AQ6AHZ1 1483 aa17.16■□□□□ 0.34
PDPN-207ENST00000506205 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
PDPN-207ENST00000506205 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
PDPN-207ENST00000506205 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
PDPN-207ENST00000506205 YEATS2Q9ULM3 1422 aa17.14■□□□□ 0.33
PDPN-207ENST00000506205 ZFYVE16Q7Z3T8 1539 aa17.13■□□□□ 0.33
PDPN-207ENST00000506205 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
PDPN-207ENST00000506205 ARHGEF40Q8TER5 1519 aa17.12■□□□□ 0.33
PDPN-207ENST00000506205 PREX2Q70Z35 1606 aa17.12■□□□□ 0.33
PDPN-207ENST00000506205 CDC42BPBQ9Y5S2 1711 aa17.11■□□□□ 0.33
PDPN-207ENST00000506205 ATP10AO60312 1499 aa17.11■□□□□ 0.33
PDPN-207ENST00000506205 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
PDPN-207ENST00000506205 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
PDPN-207ENST00000506205 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
PDPN-207ENST00000506205 TRAPPC8Q9Y2L5 1435 aa17.1■□□□□ 0.33
PDPN-207ENST00000506205 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
PDPN-207ENST00000506205 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
PDPN-207ENST00000506205 KDM5CP41229 1560 aa17.08■□□□□ 0.32
PDPN-207ENST00000506205 ABCC1P33527 1531 aa17.08■□□□□ 0.32
PDPN-207ENST00000506205 MAP3K1Q13233 1512 aa17.08■□□□□ 0.32
PDPN-207ENST00000506205 PLEKHH2Q8IVE3 1493 aa17.08■□□□□ 0.32
PDPN-207ENST00000506205 HNRNPMP52272 730 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDPN-207ENST00000506205 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
PDPN-207ENST00000506205 CDC42BPAQ5VT25 1732 aa17.06■□□□□ 0.32
PDPN-207ENST00000506205 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
PDPN-207ENST00000506205 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
PDPN-207ENST00000506205 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
PDPN-207ENST00000506205 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
PDPN-207ENST00000506205 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
PDPN-207ENST00000506205 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
PDPN-207ENST00000506205 SPAG9O60271 1321 aaKnown RBP17.03■□□□□ 0.32
PDPN-207ENST00000506205 ZNF644Q9H582 1327 aaPredicted RBP17.03■□□□□ 0.32
PDPN-207ENST00000506205 APLP2Q06481 763 aa17.03■□□□□ 0.32
PDPN-207ENST00000506205 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
PDPN-207ENST00000506205 PTPRMP28827 1452 aa17.03■□□□□ 0.32
PDPN-207ENST00000506205 BCORL1Q5H9F3 1711 aa17.01■□□□□ 0.31
PDPN-207ENST00000506205 HECW2Q9P2P5 1572 aa17.01■□□□□ 0.31
PDPN-207ENST00000506205 MLECQ14165 292 aa17■□□□□ 0.31
PDPN-207ENST00000506205 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
PDPN-207ENST00000506205 ITSN2Q9NZM3 1697 aa16.99■□□□□ 0.31
PDPN-207ENST00000506205 SYCP2Q9BX26 1530 aa16.99■□□□□ 0.31
PDPN-207ENST00000506205 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
PDPN-207ENST00000506205 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
PDPN-207ENST00000506205 DIP2CQ9Y2E4 1556 aa16.97■□□□□ 0.31
PDPN-207ENST00000506205 AGLP35573 1532 aa16.96■□□□□ 0.3
PDPN-207ENST00000506205 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
PDPN-207ENST00000506205 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
PDPN-207ENST00000506205 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
PDPN-207ENST00000506205 MIA2Q96PC5 1412 aa16.93■□□□□ 0.3
PDPN-207ENST00000506205 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
PDPN-207ENST00000506205 KIDINS220Q9ULH0 1771 aa16.92■□□□□ 0.3
PDPN-207ENST00000506205 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
PDPN-207ENST00000506205 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
PDPN-207ENST00000506205 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
PDPN-207ENST00000506205 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
PDPN-207ENST00000506205 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
PDPN-207ENST00000506205 A2MP01023 1474 aa16.89■□□□□ 0.29
PDPN-207ENST00000506205 CCDC141Q6ZP82 1450 aa16.89■□□□□ 0.29
PDPN-207ENST00000506205 ESF1Q9H501 851 aaKnown RBP16.89■□□□□ 0.29
PDPN-207ENST00000506205 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
PDPN-207ENST00000506205 INO80Q9ULG1 1556 aaPredicted RBP16.87■□□□□ 0.29
PDPN-207ENST00000506205 DHX29Q7Z478 1369 aaKnown RBP16.87■□□□□ 0.29
PDPN-207ENST00000506205 RIMS1Q86UR5 1692 aaKnown RBP16.86■□□□□ 0.29
PDPN-207ENST00000506205 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
PDPN-207ENST00000506205 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
PDPN-207ENST00000506205 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
PDPN-207ENST00000506205 CNTLNQ9NXG0 1405 aa16.84■□□□□ 0.29
PDPN-207ENST00000506205 GGT6Q6P531 493 aa16.83■□□□□ 0.28
PDPN-207ENST00000506205 PLXNC1O60486 1568 aa16.82■□□□□ 0.28
PDPN-207ENST00000506205 LMTK3Q96Q04 1460 aa16.8■□□□□ 0.28
PDPN-207ENST00000506205 FER1L4A9Z1Z3 1794 aa16.8■□□□□ 0.28
PDPN-207ENST00000506205 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
PDPN-207ENST00000506205 KIF3BO15066 747 aa16.79■□□□□ 0.28
PDPN-207ENST00000506205 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
PDPN-207ENST00000506205 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
PDPN-207ENST00000506205 TCOF1Q13428 1488 aaKnown RBP16.76■□□□□ 0.27
PDPN-207ENST00000506205 ABCC5O15440 1437 aa16.76■□□□□ 0.27
PDPN-207ENST00000506205 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
PDPN-207ENST00000506205 HSPA2P54652 639 aa16.74■□□□□ 0.27
PDPN-207ENST00000506205 NPATQ14207 1427 aa16.73■□□□□ 0.27
PDPN-207ENST00000506205 PTPN23Q9H3S7 1636 aa16.72■□□□□ 0.27
PDPN-207ENST00000506205 WASHC2CQ9Y4E1 1318 aa16.71■□□□□ 0.27
PDPN-207ENST00000506205 DAPK1P53355 1430 aa16.71■□□□□ 0.27
PDPN-207ENST00000506205 UHRF1BP1Q6BDS2 1440 aa16.71■□□□□ 0.27
PDPN-207ENST00000506205 SHANK2Q9UPX8 1470 aa16.71■□□□□ 0.27
PDPN-207ENST00000506205 RRP7BPQ9NSQ0 103 aa16.69■□□□□ 0.26
PDPN-207ENST00000506205 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
PDPN-207ENST00000506205 C3P01024 1663 aa16.69■□□□□ 0.26
PDPN-207ENST00000506205 FAM50AQ14320 339 aaKnown RBP16.68■□□□□ 0.26
PDPN-207ENST00000506205 FAM135AQ9P2D6 1515 aa16.68■□□□□ 0.26
PDPN-207ENST00000506205 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
PDPN-207ENST00000506205 KIF15Q9NS87 1388 aa16.67■□□□□ 0.26
PDPN-207ENST00000506205 ANKRD30AQ9BXX3 1397 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms