RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TIAM1Q13009 1591 aa28.28■■■□□ 2.12
SMN1-204ENST00000506163 GPATCH8Q9UKJ3 1502 aaKnown RBP28.28■■■□□ 2.12
SMN1-204ENST00000506163 CDC42BPAQ5VT25 1732 aa28.27■■■□□ 2.12
SMN1-204ENST00000506163 RICTORQ6R327 1708 aa28.26■■■□□ 2.11
SMN1-204ENST00000506163 PREX2Q70Z35 1606 aa28.26■■■□□ 2.11
SMN1-204ENST00000506163 EHBP1L1Q8N3D4 1523 aa28.25■■■□□ 2.11
SMN1-204ENST00000506163 KANK4Q5T7N3 995 aaPredicted RBP28.24■■■□□ 2.11
SMN1-204ENST00000506163 KDM4FA0A1W2PPD8 638 aa28.23■■■□□ 2.11
SMN1-204ENST00000506163 POGZQ7Z3K3 1410 aa28.2■■■□□ 2.11
SMN1-204ENST00000506163 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
SMN1-204ENST00000506163 LRRC9Q6ZRR7 1453 aa28.19■■■□□ 2.1
SMN1-204ENST00000506163 MAP3K1Q13233 1512 aa28.19■■■□□ 2.1
SMN1-204ENST00000506163 ARHGEF12Q9NZN5 1544 aa28.19■■■□□ 2.1
SMN1-204ENST00000506163 AFAP1Q8N556 730 aa28.18■■■□□ 2.1
SMN1-204ENST00000506163 ZNF777Q9ULD5 760 aaPredicted RBP28.17■■■□□ 2.1
SMN1-204ENST00000506163 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
SMN1-204ENST00000506163 NCOA2Q15596 1464 aa28.14■■■□□ 2.1
SMN1-204ENST00000506163 ZMYM4Q5VZL5 1548 aa28.14■■■□□ 2.1
SMN1-204ENST00000506163 YEATS2Q9ULM3 1422 aa28.13■■■□□ 2.09
SMN1-204ENST00000506163 TRAPPC8Q9Y2L5 1435 aa28.13■■■□□ 2.09
SMN1-204ENST00000506163 ABCC1P33527 1531 aa28.13■■■□□ 2.09
SMN1-204ENST00000506163 SAMD9LQ8IVG5 1584 aa28.12■■■□□ 2.09
SMN1-204ENST00000506163 ZNF644Q9H582 1327 aaPredicted RBP28.1■■■□□ 2.09
SMN1-204ENST00000506163 SUPT6HQ7KZ85 1726 aaKnown RBP28.1■■■□□ 2.09
SMN1-204ENST00000506163 ZNF518AQ6AHZ1 1483 aa28.08■■■□□ 2.09
SMN1-204ENST00000506163 HNRNPMP52272 730 aaKnown RBP eCLIP28.08■■■□□ 2.09
SMN1-204ENST00000506163 MAGI2Q86UL8 1455 aa28.07■■■□□ 2.08
SMN1-204ENST00000506163 ARHGEF40Q8TER5 1519 aa28.07■■■□□ 2.08
SMN1-204ENST00000506163 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
SMN1-204ENST00000506163 KDM5CP41229 1560 aa28.06■■■□□ 2.08
SMN1-204ENST00000506163 ZFYVE16Q7Z3T8 1539 aa28.04■■■□□ 2.08
SMN1-204ENST00000506163 APLP2Q06481 763 aa28.04■■■□□ 2.08
SMN1-204ENST00000506163 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
SMN1-204ENST00000506163 SYCP2Q9BX26 1530 aa28.03■■■□□ 2.08
SMN1-204ENST00000506163 KIAA1107Q9UPP5 1409 aa28.03■■■□□ 2.08
SMN1-204ENST00000506163 SIGLEC1Q9BZZ2 1709 aa27.99■■■□□ 2.07
SMN1-204ENST00000506163 MLH3Q9UHC1 1453 aa27.98■■■□□ 2.07
SMN1-204ENST00000506163 PLEKHH2Q8IVE3 1493 aa27.97■■■□□ 2.07
SMN1-204ENST00000506163 MBD5Q9P267 1494 aa27.97■■■□□ 2.07
SMN1-204ENST00000506163 ATP10AO60312 1499 aa27.95■■■□□ 2.07
SMN1-204ENST00000506163 HECW2Q9P2P5 1572 aa27.95■■■□□ 2.07
SMN1-204ENST00000506163 ARID4BQ4LE39 1312 aaPredicted RBP27.95■■■□□ 2.06
SMN1-204ENST00000506163 MYT1LQ9UL68 1186 aa27.93■■■□□ 2.06
SMN1-204ENST00000506163 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
SMN1-204ENST00000506163 CAMSAP2Q08AD1 1489 aa27.91■■■□□ 2.06
SMN1-204ENST00000506163 DIP2CQ9Y2E4 1556 aa27.91■■■□□ 2.06
SMN1-204ENST00000506163 SPAG9O60271 1321 aaKnown RBP27.9■■■□□ 2.06
SMN1-204ENST00000506163 MYOM3Q5VTT5 1437 aa27.9■■■□□ 2.06
SMN1-204ENST00000506163 ABCA6Q8N139 1617 aa27.89■■■□□ 2.06
SMN1-204ENST00000506163 C9orf84Q5VXU9 1444 aa27.89■■■□□ 2.06
SMN1-204ENST00000506163 ADAMTSL3P82987 1691 aa27.88■■■□□ 2.05
SMN1-204ENST00000506163 BCORL1Q5H9F3 1711 aa27.87■■■□□ 2.05
SMN1-204ENST00000506163 MIA2Q96PC5 1412 aa27.84■■■□□ 2.05
SMN1-204ENST00000506163 MLECQ14165 292 aa27.82■■■□□ 2.04
SMN1-204ENST00000506163 INO80Q9ULG1 1556 aaPredicted RBP27.81■■■□□ 2.04
SMN1-204ENST00000506163 ATP7AQ04656 1500 aa27.81■■■□□ 2.04
SMN1-204ENST00000506163 REREQ9P2R6 1566 aa27.79■■■□□ 2.04
SMN1-204ENST00000506163 RSPH4AQ5TD94 716 aa27.78■■■□□ 2.04
SMN1-204ENST00000506163 CCDC141Q6ZP82 1450 aa27.78■■■□□ 2.04
SMN1-204ENST00000506163 MADDQ8WXG6 1647 aa27.78■■■□□ 2.04
SMN1-204ENST00000506163 PPARGC1BQ86YN6 1023 aaKnown RBP27.77■■■□□ 2.04
SMN1-204ENST00000506163 ARHGEF5Q12774 1597 aa27.76■■■□□ 2.03
SMN1-204ENST00000506163 RTEL1-TNFRSF6BF6WH68 1400 aa27.75■■■□□ 2.03
SMN1-204ENST00000506163 FGD6Q6ZV73 1430 aa27.75■■■□□ 2.03
SMN1-204ENST00000506163 PTPRMP28827 1452 aa27.73■■■□□ 2.03
SMN1-204ENST00000506163 AGLP35573 1532 aa27.73■■■□□ 2.03
SMN1-204ENST00000506163 PTPN23Q9H3S7 1636 aa27.72■■■□□ 2.03
SMN1-204ENST00000506163 A2MP01023 1474 aa27.7■■■□□ 2.02
SMN1-204ENST00000506163 TCOF1Q13428 1488 aaKnown RBP27.69■■■□□ 2.02
SMN1-204ENST00000506163 TSPY4P0CV99 314 aa27.68■■■□□ 2.02
SMN1-204ENST00000506163 TSPY10P0CW01 314 aa27.68■■■□□ 2.02
SMN1-204ENST00000506163 RIMS1Q86UR5 1692 aaKnown RBP27.68■■■□□ 2.02
SMN1-204ENST00000506163 PLXNC1O60486 1568 aa27.68■■■□□ 2.02
SMN1-204ENST00000506163 ABCC5O15440 1437 aa27.65■■■□□ 2.02
SMN1-204ENST00000506163 ADGBQ8N7X0 1667 aa27.63■■■□□ 2.01
SMN1-204ENST00000506163 DHX29Q7Z478 1369 aaKnown RBP27.63■■■□□ 2.01
SMN1-204ENST00000506163 FER1L4A9Z1Z3 1794 aa27.62■■■□□ 2.01
SMN1-204ENST00000506163 MAST1Q9Y2H9 1570 aa27.61■■■□□ 2.01
SMN1-204ENST00000506163 PLPPR3Q6T4P5 718 aa27.59■■■□□ 2.01
SMN1-204ENST00000506163 DAPK1P53355 1430 aa27.58■■■□□ 2.01
SMN1-204ENST00000506163 CEBPAP49715 358 aaPredicted RBP27.58■■■□□ 2
SMN1-204ENST00000506163 FAM50AQ14320 339 aaKnown RBP27.57■■■□□ 2
SMN1-204ENST00000506163 DNMT1P26358 1616 aaKnown RBP27.56■■■□□ 2
SMN1-204ENST00000506163 GGT6Q6P531 493 aa27.55■■■□□ 2
SMN1-204ENST00000506163 CROCC2H7BZ55 1655 aa27.53■■■□□ 2
SMN1-204ENST00000506163 SHANK2Q9UPX8 1470 aa27.53■■■□□ 2
SMN1-204ENST00000506163 KIF3BO15066 747 aa27.52■■■□□ 2
SMN1-204ENST00000506163 CHIC2Q9UKJ5 165 aa27.52■■■□□ 2
SMN1-204ENST00000506163 RRP7BPQ9NSQ0 103 aa27.49■■□□□ 1.99
SMN1-204ENST00000506163 ESF1Q9H501 851 aaKnown RBP27.46■■□□□ 1.99
SMN1-204ENST00000506163 PTPRKQ15262 1439 aa27.46■■□□□ 1.99
SMN1-204ENST00000506163 KIF15Q9NS87 1388 aa27.45■■□□□ 1.99
SMN1-204ENST00000506163 CNTLNQ9NXG0 1405 aa27.44■■□□□ 1.98
SMN1-204ENST00000506163 ZMYM3Q14202 1370 aa27.43■■□□□ 1.98
SMN1-204ENST00000506163 NCOA1Q15788 1441 aa27.43■■□□□ 1.98
SMN1-204ENST00000506163 C3P01024 1663 aa27.43■■□□□ 1.98
SMN1-204ENST00000506163 PPP6R1Q9UPN7 881 aa27.42■■□□□ 1.98
SMN1-204ENST00000506163 DUOX2Q9NRD8 1548 aa27.42■■□□□ 1.98
SMN1-204ENST00000506163 CLTCQ00610 1675 aaKnown RBP27.41■■□□□ 1.98
SMN1-204ENST00000506163 ANKRD30AQ9BXX3 1397 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms