RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 TMEM92Q6UXU6 159 aa15.03■□□□□ -0
CHD1-204ENST00000505982 KRTAP3-3Q9BYR6 98 aa15.03■□□□□ -0
CHD1-204ENST00000505982 KRTAP3-2Q9BYR7 98 aa15.03■□□□□ -0
CHD1-204ENST00000505982 ERBB3P21860 1342 aa15.01□□□□□ -0.01
CHD1-204ENST00000505982 STK24Q9Y6E0 443 aa15.01□□□□□ -0.01
CHD1-204ENST00000505982 ECM2O94769 699 aaPredicted RBP14.99□□□□□ -0.01
CHD1-204ENST00000505982 ZSWIM6Q9HCJ5 1215 aa14.99□□□□□ -0.01
CHD1-204ENST00000505982 STK25O00506 426 aa14.95□□□□□ -0.02
CHD1-204ENST00000505982 FBXO22Q8NEZ5 403 aa14.95□□□□□ -0.02
CHD1-204ENST00000505982 VARS2Q5ST30 1063 aaKnown RBP14.9□□□□□ -0.02
CHD1-204ENST00000505982 MFRPQ9BY79 579 aa14.9□□□□□ -0.02
CHD1-204ENST00000505982 GPR153Q6NV75 609 aa14.88□□□□□ -0.03
CHD1-204ENST00000505982 PKD2Q13563 968 aa14.85□□□□□ -0.03
CHD1-204ENST00000505982 RGL2O15211 777 aa14.83□□□□□ -0.04
CHD1-204ENST00000505982 ARSIQ5FYB1 569 aa14.81□□□□□ -0.04
CHD1-204ENST00000505982 ZNF687Q8N1G0 1237 aa14.81□□□□□ -0.04
CHD1-204ENST00000505982 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
CHD1-204ENST00000505982 C2orf72A6NCS6 295 aa14.75□□□□□ -0.05
CHD1-204ENST00000505982 KIF3CO14782 793 aa14.75□□□□□ -0.05
CHD1-204ENST00000505982 ZNF316A6NFI3 1004 aaPredicted RBP14.71□□□□□ -0.05
CHD1-204ENST00000505982 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■■■□ 22
CHD1-204ENST00000505982 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
CHD1-204ENST00000505982 RNF166Q96A37 237 aaPredicted RBP14.67□□□□□ -0.06
CHD1-204ENST00000505982 MYT1LQ9UL68 1186 aa14.65□□□□□ -0.06
CHD1-204ENST00000505982 SLC34A2O95436 690 aa14.64□□□□□ -0.07
CHD1-204ENST00000505982 NUDT7P0C024 238 aa14.62□□□□□ -0.07
CHD1-204ENST00000505982 PTGER2P43116 358 aa14.62□□□□□ -0.07
CHD1-204ENST00000505982 PPP1R37O75864 691 aa14.61□□□□□ -0.07
CHD1-204ENST00000505982 ANKRD13DQ6ZTN6 518 aa14.6□□□□□ -0.07
CHD1-204ENST00000505982 PCDHGA4Q9Y5G9 962 aa14.6□□□□□ -0.07
CHD1-204ENST00000505982 HS6ST3Q8IZP7 471 aa14.55□□□□□ -0.08
CHD1-204ENST00000505982 LHX6Q9UPM6 363 aa14.55□□□□□ -0.08
CHD1-204ENST00000505982 PBX2P40425 430 aa14.54□□□□□ -0.08
CHD1-204ENST00000505982 LSM11P83369 360 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHD1-204ENST00000505982 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
CHD1-204ENST00000505982 CHGAP10645 457 aaKnown RBP14.47□□□□□ -0.09
CHD1-204ENST00000505982 FOXK1P85037 733 aa14.47□□□□□ -0.09
CHD1-204ENST00000505982 PTCD2Q8WV60 388 aaKnown RBP14.45□□□□□ -0.1
CHD1-204ENST00000505982 GPHNQ9NQX3 736 aaPredicted RBP14.45□□□□□ -0.1
CHD1-204ENST00000505982 PLPP6Q8IY26 295 aa14.44□□□□□ -0.1
CHD1-204ENST00000505982 AXIN2Q9Y2T1 843 aa14.43□□□□□ -0.1
CHD1-204ENST00000505982 POTEEQ6S8J3 1075 aa14.42□□□□□ -0.1
CHD1-204ENST00000505982 TBC1D12O60347 775 aa14.4□□□□□ -0.1
CHD1-204ENST00000505982 ARHGAP33O14559 1287 aa14.39□□□□□ -0.11
CHD1-204ENST00000505982 RYDENQ9NUL5 291 aaKnown RBP14.39□□□□□ -0.11
CHD1-204ENST00000505982 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
CHD1-204ENST00000505982 DSG2Q14126 1118 aa14.37□□□□□ -0.11
CHD1-204ENST00000505982 DNAJC5Q9H3Z4 198 aa14.37□□□□□ -0.11
CHD1-204ENST00000505982 ADGRD1Q6QNK2 874 aa14.32□□□□□ -0.12
CHD1-204ENST00000505982 NKX1-1Q15270 411 aaPredicted RBP14.31□□□□□ -0.12
CHD1-204ENST00000505982 PPP4R3BQ5MIZ7 849 aa14.31□□□□□ -0.12
CHD1-204ENST00000505982 TK2O00142 265 aa14.27□□□□□ -0.13
CHD1-204ENST00000505982 PSEN2P49810 448 aa14.25□□□□□ -0.13
CHD1-204ENST00000505982 KCNH8Q96L42 1107 aa14.24□□□□□ -0.13
CHD1-204ENST00000505982 HCSTQ9UBK5 93 aa14.24□□□□□ -0.13
CHD1-204ENST00000505982 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
CHD1-204ENST00000505982 DMRTA1Q5VZB9 504 aa14.23□□□□□ -0.13
CHD1-204ENST00000505982 OXER1Q8TDS5 423 aa14.23□□□□□ -0.13
CHD1-204ENST00000505982 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
CHD1-204ENST00000505982 PDE4AP27815 886 aa14.2□□□□□ -0.14
CHD1-204ENST00000505982 UPF1Q92900 1129 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHD1-204ENST00000505982 HRO43593 1189 aa14.19□□□□□ -0.14
CHD1-204ENST00000505982 PPP1R15BQ5SWA1 713 aa14.19□□□□□ -0.14
CHD1-204ENST00000505982 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
CHD1-204ENST00000505982 KCNK17Q96T54 332 aa14.16□□□□□ -0.14
CHD1-204ENST00000505982 ZNF454Q8N9F8 522 aa14.14□□□□□ -0.15
CHD1-204ENST00000505982 PLA2G2EQ9NZK7 142 aa14.14□□□□□ -0.15
CHD1-204ENST00000505982 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
CHD1-204ENST00000505982 GTPBP6O43824 516 aaPredicted RBP14.11□□□□□ -0.15
CHD1-204ENST00000505982 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
CHD1-204ENST00000505982 KCTD12Q96CX2 325 aaKnown RBP14.08□□□□□ -0.16
CHD1-204ENST00000505982 VPS9D1Q9Y2B5 631 aa14.08□□□□□ -0.16
CHD1-204ENST00000505982 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
CHD1-204ENST00000505982 FOSBP53539 338 aa14.06□□□□□ -0.16
CHD1-204ENST00000505982 DDX27Q96GQ7 796 aaKnown RBP14.06□□□□□ -0.16
CHD1-204ENST00000505982 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
CHD1-204ENST00000505982 PTPREP23469 700 aa14.05□□□□□ -0.16
CHD1-204ENST00000505982 EVI5O60447 810 aa14.04□□□□□ -0.16
CHD1-204ENST00000505982 SLC4A5Q9BY07 1137 aa14.04□□□□□ -0.16
CHD1-204ENST00000505982 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
CHD1-204ENST00000505982 JPH4Q96JJ6 628 aa14.02□□□□□ -0.17
CHD1-204ENST00000505982 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
CHD1-204ENST00000505982 MFSD10Q14728 455 aa13.99□□□□□ -0.17
CHD1-204ENST00000505982 ZDHHC16Q969W1 377 aa13.99□□□□□ -0.17
CHD1-204ENST00000505982 BHMG1C9JSJ3 638 aaPredicted RBP13.95□□□□□ -0.18
CHD1-204ENST00000505982 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
CHD1-204ENST00000505982 GOLGA8CPA6NN73 597 aa13.94□□□□□ -0.18
CHD1-204ENST00000505982 PTPN5P54829 565 aa13.94□□□□□ -0.18
CHD1-204ENST00000505982 ADAM33Q9BZ11 813 aa13.93□□□□□ -0.18
CHD1-204ENST00000505982 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
CHD1-204ENST00000505982 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
CHD1-204ENST00000505982 EMILIN3Q9NT22 766 aa13.91□□□□□ -0.18
CHD1-204ENST00000505982 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
CHD1-204ENST00000505982 WNT2BQ93097 391 aa13.88□□□□□ -0.19
CHD1-204ENST00000505982 THSD4Q6ZMP0 1018 aa13.87□□□□□ -0.19
CHD1-204ENST00000505982 PCDHGA10Q9Y5H3 936 aa13.86□□□□□ -0.19
CHD1-204ENST00000505982 CADPS2Q86UW7 1296 aa13.85□□□□□ -0.19
CHD1-204ENST00000505982 PPP1R3GB7ZBB8 358 aa13.84□□□□□ -0.19
CHD1-204ENST00000505982 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
CHD1-204ENST00000505982 PHF14O94880 888 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms