RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ARID3CA6NKF2 412 aa11.99□□□□□ -0.49
COL4A5-208ENST00000505728 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-208ENST00000505728 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
COL4A5-208ENST00000505728 PLEKHD1A6NEE1 506 aa11.98□□□□□ -0.49
COL4A5-208ENST00000505728 ITGAEP38570 1179 aa11.98□□□□□ -0.49
COL4A5-208ENST00000505728 ATP10BO94823 1461 aa11.97□□□□□ -0.49
COL4A5-208ENST00000505728 CD109Q6YHK3 1445 aa11.97□□□□□ -0.49
COL4A5-208ENST00000505728 TCOF1Q13428 1488 aaKnown RBP11.96□□□□□ -0.49
COL4A5-208ENST00000505728 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
COL4A5-208ENST00000505728 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
COL4A5-208ENST00000505728 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
COL4A5-208ENST00000505728 PTPN23Q9H3S7 1636 aa11.95□□□□□ -0.5
COL4A5-208ENST00000505728 ABCA9Q8IUA7 1624 aa11.93□□□□□ -0.5
COL4A5-208ENST00000505728 HECW2Q9P2P5 1572 aa11.92□□□□□ -0.5
COL4A5-208ENST00000505728 DHX57Q6P158 1386 aaKnown RBP11.91□□□□□ -0.5
COL4A5-208ENST00000505728 RAB3GAP2Q9H2M9 1393 aa11.91□□□□□ -0.5
COL4A5-208ENST00000505728 ARAP3Q8WWN8 1544 aa11.9□□□□□ -0.5
COL4A5-208ENST00000505728 CFDP1Q9UEE9 299 aaPredicted RBP11.88□□□□□ -0.51
COL4A5-208ENST00000505728 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
COL4A5-208ENST00000505728 PTPRKQ15262 1439 aa11.87□□□□□ -0.51
COL4A5-208ENST00000505728 GPATCH8Q9UKJ3 1502 aaKnown RBP11.87□□□□□ -0.51
COL4A5-208ENST00000505728 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
COL4A5-208ENST00000505728 HFM1A2PYH4 1435 aa11.86□□□□□ -0.51
COL4A5-208ENST00000505728 KIF14Q15058 1648 aa11.86□□□□□ -0.51
COL4A5-208ENST00000505728 FRMPD1Q5SYB0 1578 aa11.86□□□□□ -0.51
COL4A5-208ENST00000505728 AKNAQ7Z591 1439 aa11.86□□□□□ -0.51
COL4A5-208ENST00000505728 ADAMTSL3P82987 1691 aa11.84□□□□□ -0.51
COL4A5-208ENST00000505728 ROCK1Q13464 1354 aa11.83□□□□□ -0.52
COL4A5-208ENST00000505728 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-208ENST00000505728 ABCC5O15440 1437 aa11.82□□□□□ -0.52
COL4A5-208ENST00000505728 DAPK1P53355 1430 aa11.82□□□□□ -0.52
COL4A5-208ENST00000505728 NAIPQ13075 1403 aa11.82□□□□□ -0.52
COL4A5-208ENST00000505728 RICTORQ6R327 1708 aa11.82□□□□□ -0.52
COL4A5-208ENST00000505728 ZNF644Q9H582 1327 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-208ENST00000505728 NEO1Q92859 1461 aa11.82□□□□□ -0.52
COL4A5-208ENST00000505728 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
COL4A5-208ENST00000505728 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
COL4A5-208ENST00000505728 CAMSAP2Q08AD1 1489 aa11.81□□□□□ -0.52
COL4A5-208ENST00000505728 BCORL1Q5H9F3 1711 aa11.8□□□□□ -0.52
COL4A5-208ENST00000505728 RAPGEF3O95398 923 aa11.8□□□□□ -0.52
COL4A5-208ENST00000505728 CHIC2Q9UKJ5 165 aa11.8□□□□□ -0.52
COL4A5-208ENST00000505728 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
COL4A5-208ENST00000505728 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
COL4A5-208ENST00000505728 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-208ENST00000505728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL4A5-208ENST00000505728 TTC37Q6PGP7 1564 aa11.79□□□□□ -0.52
COL4A5-208ENST00000505728 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
COL4A5-208ENST00000505728 SIGLEC1Q9BZZ2 1709 aa11.77□□□□□ -0.52
COL4A5-208ENST00000505728 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
COL4A5-208ENST00000505728 PTPRMP28827 1452 aa11.76□□□□□ -0.53
COL4A5-208ENST00000505728 ARHGEF40Q8TER5 1519 aa11.76□□□□□ -0.53
COL4A5-208ENST00000505728 CFAP74Q9C0B2 1584 aa11.76□□□□□ -0.53
COL4A5-208ENST00000505728 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
COL4A5-208ENST00000505728 CDC42BPBQ9Y5S2 1711 aa11.75□□□□□ -0.53
COL4A5-208ENST00000505728 TSPY4P0CV99 314 aa11.75□□□□□ -0.53
COL4A5-208ENST00000505728 TSPY10P0CW01 314 aa11.75□□□□□ -0.53
COL4A5-208ENST00000505728 TIMELESSQ9UNS1 1208 aa11.75□□□□□ -0.53
COL4A5-208ENST00000505728 ADGRL2O95490 1459 aa11.75□□□□□ -0.53
COL4A5-208ENST00000505728 ANKRD30AQ9BXX3 1397 aa11.74□□□□□ -0.53
COL4A5-208ENST00000505728 FANCAO15360 1455 aa11.74□□□□□ -0.53
COL4A5-208ENST00000505728 ARHGEF5Q12774 1597 aa11.74□□□□□ -0.53
COL4A5-208ENST00000505728 RIMS1Q86UR5 1692 aaKnown RBP11.74□□□□□ -0.53
COL4A5-208ENST00000505728 PLCH2O75038 1416 aa11.73□□□□□ -0.53
COL4A5-208ENST00000505728 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
COL4A5-208ENST00000505728 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
COL4A5-208ENST00000505728 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
COL4A5-208ENST00000505728 SHANK2Q9UPX8 1470 aa11.73□□□□□ -0.53
COL4A5-208ENST00000505728 MYO5CQ9NQX4 1742 aa11.72□□□□□ -0.53
COL4A5-208ENST00000505728 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
COL4A5-208ENST00000505728 ZMYM4Q5VZL5 1548 aa11.72□□□□□ -0.53
COL4A5-208ENST00000505728 KIAA1107Q9UPP5 1409 aa11.72□□□□□ -0.53
COL4A5-208ENST00000505728 EFCAB2Q5VUJ9 269 aa11.72□□□□□ -0.53
COL4A5-208ENST00000505728 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.53
COL4A5-208ENST00000505728 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
COL4A5-208ENST00000505728 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
COL4A5-208ENST00000505728 TRIM52Q96A61 297 aa11.71□□□□□ -0.53
COL4A5-208ENST00000505728 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
COL4A5-208ENST00000505728 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
COL4A5-208ENST00000505728 CCDC141Q6ZP82 1450 aa11.7□□□□□ -0.54
COL4A5-208ENST00000505728 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
COL4A5-208ENST00000505728 ZFYVE16Q7Z3T8 1539 aa11.69□□□□□ -0.54
COL4A5-208ENST00000505728 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
COL4A5-208ENST00000505728 ARID4BQ4LE39 1312 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-208ENST00000505728 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-208ENST00000505728 LMTK3Q96Q04 1460 aa11.68□□□□□ -0.54
COL4A5-208ENST00000505728 FER1L4A9Z1Z3 1794 aa11.67□□□□□ -0.54
COL4A5-208ENST00000505728 SIN3AQ96ST3 1273 aa11.67□□□□□ -0.54
COL4A5-208ENST00000505728 MPHOSPH9Q99550 1183 aa11.67□□□□□ -0.54
COL4A5-208ENST00000505728 MAST1Q9Y2H9 1570 aa11.66□□□□□ -0.54
COL4A5-208ENST00000505728 NEUROD1Q13562 356 aa11.65□□□□□ -0.54
COL4A5-208ENST00000505728 FOXD1Q16676 465 aa11.65□□□□□ -0.54
COL4A5-208ENST00000505728 POGZQ7Z3K3 1410 aa11.65□□□□□ -0.54
COL4A5-208ENST00000505728 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
COL4A5-208ENST00000505728 SCAPERQ9BY12 1400 aa11.64□□□□□ -0.55
COL4A5-208ENST00000505728 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
COL4A5-208ENST00000505728 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
COL4A5-208ENST00000505728 KIF15Q9NS87 1388 aa11.62□□□□□ -0.55
COL4A5-208ENST00000505728 ABCC1P33527 1531 aa11.61□□□□□ -0.55
COL4A5-208ENST00000505728 ARHGEF12Q9NZN5 1544 aa11.61□□□□□ -0.55
COL4A5-208ENST00000505728 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms