RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
VCAN-206ENST00000505615 KIF21BO75037 1637 aa12.72□□□□□ -0.37
VCAN-206ENST00000505615 TTBK1Q5TCY1 1321 aaPredicted RBP12.71□□□□□ -0.37
VCAN-206ENST00000505615 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
VCAN-206ENST00000505615 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.38
VCAN-206ENST00000505615 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
VCAN-206ENST00000505615 DISP1Q96F81 1524 aa12.7□□□□□ -0.38
VCAN-206ENST00000505615 ADAMTSL3P82987 1691 aa12.66□□□□□ -0.38
VCAN-206ENST00000505615 CFAP43Q8NDM7 1665 aa12.66□□□□□ -0.38
VCAN-206ENST00000505615 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
VCAN-206ENST00000505615 KIF27Q86VH2 1401 aa12.65□□□□□ -0.38
VCAN-206ENST00000505615 MAGI3Q5TCQ9 1506 aa12.65□□□□□ -0.38
VCAN-206ENST00000505615 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
VCAN-206ENST00000505615 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
VCAN-206ENST00000505615 LHX8Q68G74 356 aa12.63□□□□□ -0.39
VCAN-206ENST00000505615 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
VCAN-206ENST00000505615 PTPRMP28827 1452 aa12.62□□□□□ -0.39
VCAN-206ENST00000505615 KIAA0556O60303 1618 aa12.62□□□□□ -0.39
VCAN-206ENST00000505615 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
VCAN-206ENST00000505615 CLCN6P51797 869 aa12.61□□□□□ -0.39
VCAN-206ENST00000505615 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
VCAN-206ENST00000505615 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
VCAN-206ENST00000505615 CD109Q6YHK3 1445 aa12.6□□□□□ -0.39
VCAN-206ENST00000505615 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
VCAN-206ENST00000505615 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
VCAN-206ENST00000505615 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
VCAN-206ENST00000505615 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
VCAN-206ENST00000505615 ARAP3Q8WWN8 1544 aa12.57□□□□□ -0.4
VCAN-206ENST00000505615 BCORL1Q5H9F3 1711 aa12.57□□□□□ -0.4
VCAN-206ENST00000505615 MADDQ8WXG6 1647 aa12.55□□□□□ -0.4
VCAN-206ENST00000505615 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
VCAN-206ENST00000505615 ABCA8O94911 1581 aa12.54□□□□□ -0.4
VCAN-206ENST00000505615 ILDR2Q71H61 639 aa12.53□□□□□ -0.4
VCAN-206ENST00000505615 FRMPD1Q5SYB0 1578 aa12.51□□□□□ -0.41
VCAN-206ENST00000505615 SOCS7O14512 581 aa12.5□□□□□ -0.41
VCAN-206ENST00000505615 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
VCAN-206ENST00000505615 KCNH8Q96L42 1107 aa12.48□□□□□ -0.41
VCAN-206ENST00000505615 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
VCAN-206ENST00000505615 CTTNBP2Q8WZ74 1663 aa12.48□□□□□ -0.41
VCAN-206ENST00000505615 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
VCAN-206ENST00000505615 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
VCAN-206ENST00000505615 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
VCAN-206ENST00000505615 CERKQ8TCT0 537 aa12.45□□□□□ -0.42
VCAN-206ENST00000505615 ARHGEF40Q8TER5 1519 aa12.45□□□□□ -0.42
VCAN-206ENST00000505615 HSPA2P54652 639 aa12.43□□□□□ -0.42
VCAN-206ENST00000505615 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
VCAN-206ENST00000505615 RAPGEF3O95398 923 aa12.42□□□□□ -0.42
VCAN-206ENST00000505615 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
VCAN-206ENST00000505615 SPATA31D1Q6ZQQ2 1576 aa12.42□□□□□ -0.42
VCAN-206ENST00000505615 SIGLEC1Q9BZZ2 1709 aa12.42□□□□□ -0.42
VCAN-206ENST00000505615 NEO1Q92859 1461 aa12.41□□□□□ -0.42
VCAN-206ENST00000505615 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
VCAN-206ENST00000505615 GOLGA3Q08378 1498 aa12.4□□□□□ -0.42
VCAN-206ENST00000505615 RICTORQ6R327 1708 aa12.4□□□□□ -0.42
VCAN-206ENST00000505615 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
VCAN-206ENST00000505615 ATP10BO94823 1461 aa12.39□□□□□ -0.43
VCAN-206ENST00000505615 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
VCAN-206ENST00000505615 FER1L4A9Z1Z3 1794 aa12.36□□□□□ -0.43
VCAN-206ENST00000505615 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
VCAN-206ENST00000505615 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
VCAN-206ENST00000505615 PROM2Q8N271 834 aa12.34□□□□□ -0.43
VCAN-206ENST00000505615 ZMYM4Q5VZL5 1548 aa12.33□□□□□ -0.44
VCAN-206ENST00000505615 PREX1Q8TCU6 1659 aa12.33□□□□□ -0.44
VCAN-206ENST00000505615 ARID3CA6NKF2 412 aa12.32□□□□□ -0.44
VCAN-206ENST00000505615 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
VCAN-206ENST00000505615 FANCAO15360 1455 aa12.32□□□□□ -0.44
VCAN-206ENST00000505615 FHOD3Q2V2M9 1422 aa12.31□□□□□ -0.44
VCAN-206ENST00000505615 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
VCAN-206ENST00000505615 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
VCAN-206ENST00000505615 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
VCAN-206ENST00000505615 POGZQ7Z3K3 1410 aa12.29□□□□□ -0.44
VCAN-206ENST00000505615 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
VCAN-206ENST00000505615 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
VCAN-206ENST00000505615 ZFYVE16Q7Z3T8 1539 aa12.29□□□□□ -0.44
VCAN-206ENST00000505615 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.44
VCAN-206ENST00000505615 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.44
VCAN-206ENST00000505615 CFAP74Q9C0B2 1584 aa12.27□□□□□ -0.44
VCAN-206ENST00000505615 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.44
VCAN-206ENST00000505615 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
VCAN-206ENST00000505615 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
VCAN-206ENST00000505615 HECW1Q76N89 1606 aa12.25□□□□□ -0.45
VCAN-206ENST00000505615 NUP153P49790 1475 aaKnown RBP12.24□□□□□ -0.45
VCAN-206ENST00000505615 LTBP4Q8N2S1 1624 aa12.24□□□□□ -0.45
VCAN-206ENST00000505615 MAGI2Q86UL8 1455 aa12.23□□□□□ -0.45
VCAN-206ENST00000505615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.21□□□□□ -0.45
VCAN-206ENST00000505615 IQSEC2Q5JU85 1478 aa12.21□□□□□ -0.46
VCAN-206ENST00000505615 PTPRTO14522 1441 aa12.2□□□□□ -0.46
VCAN-206ENST00000505615 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
VCAN-206ENST00000505615 MLECQ14165 292 aa12.2□□□□□ -0.46
VCAN-206ENST00000505615 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
VCAN-206ENST00000505615 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
VCAN-206ENST00000505615 UHRF1BP1Q6BDS2 1440 aa12.19□□□□□ -0.46
VCAN-206ENST00000505615 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
VCAN-206ENST00000505615 CEBPAP49715 358 aaPredicted RBP12.17□□□□□ -0.46
VCAN-206ENST00000505615 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
VCAN-206ENST00000505615 C9orf84Q5VXU9 1444 aa12.17□□□□□ -0.46
VCAN-206ENST00000505615 ATP10AO60312 1499 aa12.16□□□□□ -0.46
VCAN-206ENST00000505615 C3P01024 1663 aa12.16□□□□□ -0.46
VCAN-206ENST00000505615 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
VCAN-206ENST00000505615 SCAPERQ9BY12 1400 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms