RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
UBE2D3-219ENST00000505207 CLIP1P30622 1438 aa18.18■□□□□ 0.5
UBE2D3-219ENST00000505207 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
UBE2D3-219ENST00000505207 MADDQ8WXG6 1647 aa18.16■□□□□ 0.5
UBE2D3-219ENST00000505207 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
UBE2D3-219ENST00000505207 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
UBE2D3-219ENST00000505207 MLECQ14165 292 aa18.14■□□□□ 0.49
UBE2D3-219ENST00000505207 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
UBE2D3-219ENST00000505207 ATP10AO60312 1499 aa18.12■□□□□ 0.49
UBE2D3-219ENST00000505207 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
UBE2D3-219ENST00000505207 FBXO41Q8TF61 875 aa18.11■□□□□ 0.49
UBE2D3-219ENST00000505207 KIF14Q15058 1648 aa18.11■□□□□ 0.49
UBE2D3-219ENST00000505207 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
UBE2D3-219ENST00000505207 RIMS1Q86UR5 1692 aaKnown RBP18.09■□□□□ 0.49
UBE2D3-219ENST00000505207 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.49
UBE2D3-219ENST00000505207 ZNF518AQ6AHZ1 1483 aa18.08■□□□□ 0.49
UBE2D3-219ENST00000505207 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.49
UBE2D3-219ENST00000505207 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
UBE2D3-219ENST00000505207 AFAP1Q8N556 730 aa18.07■□□□□ 0.48
UBE2D3-219ENST00000505207 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
UBE2D3-219ENST00000505207 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
UBE2D3-219ENST00000505207 FOXD1Q16676 465 aa18.04■□□□□ 0.48
UBE2D3-219ENST00000505207 HSPA2P54652 639 aa18.03■□□□□ 0.48
UBE2D3-219ENST00000505207 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-219ENST00000505207 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
UBE2D3-219ENST00000505207 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
UBE2D3-219ENST00000505207 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
UBE2D3-219ENST00000505207 KDM5CP41229 1560 aa17.98■□□□□ 0.47
UBE2D3-219ENST00000505207 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
UBE2D3-219ENST00000505207 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
UBE2D3-219ENST00000505207 SIGLEC1Q9BZZ2 1709 aa17.96■□□□□ 0.47
UBE2D3-219ENST00000505207 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
UBE2D3-219ENST00000505207 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
UBE2D3-219ENST00000505207 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
UBE2D3-219ENST00000505207 LRRIQ1Q96JM4 1722 aa17.92■□□□□ 0.46
UBE2D3-219ENST00000505207 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
UBE2D3-219ENST00000505207 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
UBE2D3-219ENST00000505207 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
UBE2D3-219ENST00000505207 ABCC1P33527 1531 aa17.91■□□□□ 0.46
UBE2D3-219ENST00000505207 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
UBE2D3-219ENST00000505207 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
UBE2D3-219ENST00000505207 AGLP35573 1532 aa17.9■□□□□ 0.46
UBE2D3-219ENST00000505207 CERKQ8TCT0 537 aa17.9■□□□□ 0.46
UBE2D3-219ENST00000505207 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-219ENST00000505207 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
UBE2D3-219ENST00000505207 SPAG9O60271 1321 aaKnown RBP17.89■□□□□ 0.45
UBE2D3-219ENST00000505207 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
UBE2D3-219ENST00000505207 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
UBE2D3-219ENST00000505207 CCNB3Q8WWL7 1395 aa17.87■□□□□ 0.45
UBE2D3-219ENST00000505207 PLEKHH2Q8IVE3 1493 aa17.87■□□□□ 0.45
UBE2D3-219ENST00000505207 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.454e-13■■■■■ 32.7
UBE2D3-219ENST00000505207 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
UBE2D3-219ENST00000505207 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
UBE2D3-219ENST00000505207 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
UBE2D3-219ENST00000505207 ITSN2Q9NZM3 1697 aa17.85■□□□□ 0.45
UBE2D3-219ENST00000505207 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
UBE2D3-219ENST00000505207 CDC42BPAQ5VT25 1732 aa17.84■□□□□ 0.45
UBE2D3-219ENST00000505207 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
UBE2D3-219ENST00000505207 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
UBE2D3-219ENST00000505207 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
UBE2D3-219ENST00000505207 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
UBE2D3-219ENST00000505207 PTPRTO14522 1441 aa17.77■□□□□ 0.44
UBE2D3-219ENST00000505207 ZMYM3Q14202 1370 aa17.77■□□□□ 0.43
UBE2D3-219ENST00000505207 C3P01024 1663 aa17.77■□□□□ 0.43
UBE2D3-219ENST00000505207 NPATQ14207 1427 aa17.76■□□□□ 0.43
UBE2D3-219ENST00000505207 GGT6Q6P531 493 aa17.75■□□□□ 0.43
UBE2D3-219ENST00000505207 ATP7AQ04656 1500 aa17.75■□□□□ 0.43
UBE2D3-219ENST00000505207 A2MP01023 1474 aa17.75■□□□□ 0.43
UBE2D3-219ENST00000505207 RSPH4AQ5TD94 716 aa17.73■□□□□ 0.43
UBE2D3-219ENST00000505207 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
UBE2D3-219ENST00000505207 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
UBE2D3-219ENST00000505207 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
UBE2D3-219ENST00000505207 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
UBE2D3-219ENST00000505207 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-219ENST00000505207 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-219ENST00000505207 RTEL1-TNFRSF6BF6WH68 1400 aa17.69■□□□□ 0.42
UBE2D3-219ENST00000505207 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
UBE2D3-219ENST00000505207 INO80Q9ULG1 1556 aaPredicted RBP17.68■□□□□ 0.42
UBE2D3-219ENST00000505207 PKD2Q13563 968 aa17.67■□□□□ 0.42
UBE2D3-219ENST00000505207 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
UBE2D3-219ENST00000505207 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
UBE2D3-219ENST00000505207 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
UBE2D3-219ENST00000505207 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
UBE2D3-219ENST00000505207 TSPY4P0CV99 314 aa17.65■□□□□ 0.42
UBE2D3-219ENST00000505207 TSPY10P0CW01 314 aa17.65■□□□□ 0.42
UBE2D3-219ENST00000505207 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.41
UBE2D3-219ENST00000505207 PTPRKQ15262 1439 aa17.64■□□□□ 0.41
UBE2D3-219ENST00000505207 CAMSAP1Q5T5Y3 1602 aa17.63■□□□□ 0.41
UBE2D3-219ENST00000505207 KIF3BO15066 747 aa17.63■□□□□ 0.41
UBE2D3-219ENST00000505207 NCKAP5LQ9HCH0 1330 aa17.62■□□□□ 0.41
UBE2D3-219ENST00000505207 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-219ENST00000505207 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
UBE2D3-219ENST00000505207 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
UBE2D3-219ENST00000505207 CCDC141Q6ZP82 1450 aa17.61■□□□□ 0.41
UBE2D3-219ENST00000505207 PLA2R1Q13018 1463 aa17.59■□□□□ 0.41
UBE2D3-219ENST00000505207 WASHC2CQ9Y4E1 1318 aa17.59■□□□□ 0.41
UBE2D3-219ENST00000505207 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
UBE2D3-219ENST00000505207 LTBP4Q8N2S1 1624 aa17.56■□□□□ 0.4
UBE2D3-219ENST00000505207 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-219ENST00000505207 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms