RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 MAGI2Q86UL8 1455 aa27.13■■□□□ 1.93
SYNE4-207ENST00000505054 POGZQ7Z3K3 1410 aa27.11■■□□□ 1.93
SYNE4-207ENST00000505054 MYO5CQ9NQX4 1742 aa27.1■■□□□ 1.93
SYNE4-207ENST00000505054 YEATS2Q9ULM3 1422 aa27.08■■□□□ 1.93
SYNE4-207ENST00000505054 FER1L4A9Z1Z3 1794 aa27.07■■□□□ 1.92
SYNE4-207ENST00000505054 PLCH2O75038 1416 aa27.07■■□□□ 1.92
SYNE4-207ENST00000505054 FBXO41Q8TF61 875 aa27.04■■□□□ 1.92
SYNE4-207ENST00000505054 CASKIN1Q8WXD9 1431 aa27.04■■□□□ 1.92
SYNE4-207ENST00000505054 KIF14Q15058 1648 aa27.02■■□□□ 1.92
SYNE4-207ENST00000505054 SCAPERQ9BY12 1400 aa27.02■■□□□ 1.92
SYNE4-207ENST00000505054 FYCO1Q9BQS8 1478 aa26.99■■□□□ 1.91
SYNE4-207ENST00000505054 ATP1B4Q9UN42 357 aaPredicted RBP26.98■■□□□ 1.91
SYNE4-207ENST00000505054 LRRIQ1Q96JM4 1722 aa26.96■■□□□ 1.91
SYNE4-207ENST00000505054 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.9
SYNE4-207ENST00000505054 C9orf84Q5VXU9 1444 aa26.94■■□□□ 1.9
SYNE4-207ENST00000505054 ATP10AO60312 1499 aa26.93■■□□□ 1.9
SYNE4-207ENST00000505054 CDK11AQ9UQ88 783 aaPredicted RBP26.92■■□□□ 1.9
SYNE4-207ENST00000505054 ZNF518AQ6AHZ1 1483 aa26.92■■□□□ 1.9
SYNE4-207ENST00000505054 KDM5CP41229 1560 aa26.92■■□□□ 1.9
SYNE4-207ENST00000505054 TROQ12816 1431 aaPredicted RBP26.91■■□□□ 1.9
SYNE4-207ENST00000505054 ARHGAP5Q13017 1502 aa26.9■■□□□ 1.9
SYNE4-207ENST00000505054 EFCAB2Q5VUJ9 269 aa26.9■■□□□ 1.9
SYNE4-207ENST00000505054 PREX1Q8TCU6 1659 aa26.89■■□□□ 1.9
SYNE4-207ENST00000505054 CCDC18Q5T9S5 1454 aa26.89■■□□□ 1.9
SYNE4-207ENST00000505054 MLECQ14165 292 aa26.87■■□□□ 1.89
SYNE4-207ENST00000505054 HSPA2P54652 639 aa26.86■■□□□ 1.89
SYNE4-207ENST00000505054 PLPPR3Q6T4P5 718 aa26.86■■□□□ 1.89
SYNE4-207ENST00000505054 VPS8Q8N3P4 1428 aa26.86■■□□□ 1.89
SYNE4-207ENST00000505054 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
SYNE4-207ENST00000505054 PREX2Q70Z35 1606 aa26.83■■□□□ 1.89
SYNE4-207ENST00000505054 REREQ9P2R6 1566 aa26.83■■□□□ 1.89
SYNE4-207ENST00000505054 DIP2CQ9Y2E4 1556 aa26.83■■□□□ 1.89
SYNE4-207ENST00000505054 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
SYNE4-207ENST00000505054 ABCC1P33527 1531 aa26.78■■□□□ 1.88
SYNE4-207ENST00000505054 ITSN2Q9NZM3 1697 aa26.78■■□□□ 1.88
SYNE4-207ENST00000505054 MLH3Q9UHC1 1453 aa26.74■■□□□ 1.87
SYNE4-207ENST00000505054 AFAP1Q8N556 730 aa26.72■■□□□ 1.87
SYNE4-207ENST00000505054 CDC42BPAQ5VT25 1732 aa26.72■■□□□ 1.87
SYNE4-207ENST00000505054 SETD1BQ9UPS6 1966 aaKnown RBP26.7■■□□□ 1.86
SYNE4-207ENST00000505054 AGLP35573 1532 aa26.7■■□□□ 1.86
SYNE4-207ENST00000505054 C3P01024 1663 aa26.7■■□□□ 1.86
SYNE4-207ENST00000505054 STRCQ7RTU9 1775 aa26.69■■□□□ 1.86
SYNE4-207ENST00000505054 UHRF1BP1Q6BDS2 1440 aa26.68■■□□□ 1.86
SYNE4-207ENST00000505054 KIDINS220Q9ULH0 1771 aa26.67■■□□□ 1.86
SYNE4-207ENST00000505054 TRAPPC8Q9Y2L5 1435 aa26.66■■□□□ 1.86
SYNE4-207ENST00000505054 MYT1LQ9UL68 1186 aa26.66■■□□□ 1.86
SYNE4-207ENST00000505054 TIAM1Q13009 1591 aa26.66■■□□□ 1.86
SYNE4-207ENST00000505054 CEBPAP49715 358 aaPredicted RBP26.65■■□□□ 1.86
SYNE4-207ENST00000505054 CERKQ8TCT0 537 aa26.65■■□□□ 1.86
SYNE4-207ENST00000505054 MTUS2Q5JR59 1369 aa26.62■■□□□ 1.85
SYNE4-207ENST00000505054 EHBP1L1Q8N3D4 1523 aa26.61■■□□□ 1.85
SYNE4-207ENST00000505054 MAP3K1Q13233 1512 aa26.6■■□□□ 1.85
SYNE4-207ENST00000505054 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
SYNE4-207ENST00000505054 MROH2AA6NES4 1674 aa26.57■■□□□ 1.84
SYNE4-207ENST00000505054 CNTLNQ9NXG0 1405 aa26.56■■□□□ 1.84
SYNE4-207ENST00000505054 SYCP2Q9BX26 1530 aa26.55■■□□□ 1.84
SYNE4-207ENST00000505054 DMRT2Q9Y5R5 561 aa26.55■■□□□ 1.84
SYNE4-207ENST00000505054 LRRC9Q6ZRR7 1453 aa26.54■■□□□ 1.84
SYNE4-207ENST00000505054 ESF1Q9H501 851 aaKnown RBP26.52■■□□□ 1.84
SYNE4-207ENST00000505054 INO80Q9ULG1 1556 aaPredicted RBP26.5■■□□□ 1.83
SYNE4-207ENST00000505054 GPATCH8Q9UKJ3 1502 aaKnown RBP26.49■■□□□ 1.83
SYNE4-207ENST00000505054 PTPRTO14522 1441 aa26.49■■□□□ 1.83
SYNE4-207ENST00000505054 KANK4Q5T7N3 995 aaPredicted RBP26.49■■□□□ 1.83
SYNE4-207ENST00000505054 SUPT6HQ7KZ85 1726 aaKnown RBP26.48■■□□□ 1.83
SYNE4-207ENST00000505054 ATP7AQ04656 1500 aa26.48■■□□□ 1.83
SYNE4-207ENST00000505054 PLXNC1O60486 1568 aa26.46■■□□□ 1.83
SYNE4-207ENST00000505054 NCOA2Q15596 1464 aa26.46■■□□□ 1.83
SYNE4-207ENST00000505054 PLEKHH2Q8IVE3 1493 aa26.46■■□□□ 1.83
SYNE4-207ENST00000505054 NPATQ14207 1427 aa26.45■■□□□ 1.82
SYNE4-207ENST00000505054 APLP2Q06481 763 aa26.44■■□□□ 1.82
SYNE4-207ENST00000505054 CCNB3Q8WWL7 1395 aa26.44■■□□□ 1.82
SYNE4-207ENST00000505054 NCOA1Q15788 1441 aa26.43■■□□□ 1.82
SYNE4-207ENST00000505054 KIAA1107Q9UPP5 1409 aa26.43■■□□□ 1.82
SYNE4-207ENST00000505054 ZNF777Q9ULD5 760 aaPredicted RBP26.43■■□□□ 1.82
SYNE4-207ENST00000505054 SPAG9O60271 1321 aaKnown RBP26.42■■□□□ 1.82
SYNE4-207ENST00000505054 CLTCQ00610 1675 aaKnown RBP26.41■■□□□ 1.82
SYNE4-207ENST00000505054 ZNF142P52746 1687 aaPredicted RBP26.41■■□□□ 1.82
SYNE4-207ENST00000505054 ADGBQ8N7X0 1667 aa26.39■■□□□ 1.82
SYNE4-207ENST00000505054 LTBP4Q8N2S1 1624 aa26.39■■□□□ 1.81
SYNE4-207ENST00000505054 CAMSAP1Q5T5Y3 1602 aa26.38■■□□□ 1.81
SYNE4-207ENST00000505054 MYO3AQ8NEV4 1616 aa26.38■■□□□ 1.81
SYNE4-207ENST00000505054 A2MP01023 1474 aa26.37■■□□□ 1.81
SYNE4-207ENST00000505054 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
SYNE4-207ENST00000505054 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
SYNE4-207ENST00000505054 ZMYM3Q14202 1370 aa26.34■■□□□ 1.81
SYNE4-207ENST00000505054 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
SYNE4-207ENST00000505054 CEP170BQ9Y4F5 1589 aaPredicted RBP26.3■■□□□ 1.8
SYNE4-207ENST00000505054 PLA2R1Q13018 1463 aa26.28■■□□□ 1.8
SYNE4-207ENST00000505054 PTPRKQ15262 1439 aa26.26■■□□□ 1.79
SYNE4-207ENST00000505054 MYOM3Q5VTT5 1437 aa26.25■■□□□ 1.79
SYNE4-207ENST00000505054 ZNF644Q9H582 1327 aaPredicted RBP26.24■■□□□ 1.79
SYNE4-207ENST00000505054 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
SYNE4-207ENST00000505054 SPATA31D1Q6ZQQ2 1576 aa26.23■■□□□ 1.79
SYNE4-207ENST00000505054 RTEL1-TNFRSF6BF6WH68 1400 aa26.22■■□□□ 1.79
SYNE4-207ENST00000505054 DISP3Q9P2K9 1392 aa26.21■■□□□ 1.79
SYNE4-207ENST00000505054 CAMSAP2Q08AD1 1489 aa26.21■■□□□ 1.79
SYNE4-207ENST00000505054 TCOF1Q13428 1488 aaKnown RBP26.21■■□□□ 1.79
SYNE4-207ENST00000505054 GGT6Q6P531 493 aa26.2■■□□□ 1.78
SYNE4-207ENST00000505054 PPP6R1Q9UPN7 881 aa26.2■■□□□ 1.78
SYNE4-207ENST00000505054 MIA2Q96PC5 1412 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms