RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 EMP3P54852 163 aa12.41□□□□□ -0.42
SSBP2-204ENST00000504985 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
SSBP2-204ENST00000504985 HS3ST6Q96QI5 342 aa12.37□□□□□ -0.43
SSBP2-204ENST00000504985 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
SSBP2-204ENST00000504985 KIF3CO14782 793 aa12.33□□□□□ -0.44
SSBP2-204ENST00000504985 KRTAP3-3Q9BYR6 98 aa12.33□□□□□ -0.44
SSBP2-204ENST00000504985 KRTAP3-2Q9BYR7 98 aa12.33□□□□□ -0.44
SSBP2-204ENST00000504985 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
SSBP2-204ENST00000504985 SPNS2Q8IVW8 549 aa12.32□□□□□ -0.44
SSBP2-204ENST00000504985 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
SSBP2-204ENST00000504985 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
SSBP2-204ENST00000504985 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
SSBP2-204ENST00000504985 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
SSBP2-204ENST00000504985 HS6ST3Q8IZP7 471 aa12.26□□□□□ -0.45
SSBP2-204ENST00000504985 PPP1R37O75864 691 aa12.24□□□□□ -0.45
SSBP2-204ENST00000504985 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
SSBP2-204ENST00000504985 C2orf72A6NCS6 295 aa12.23□□□□□ -0.45
SSBP2-204ENST00000504985 ERBB3P21860 1342 aa12.21□□□□□ -0.46
SSBP2-204ENST00000504985 SLC34A2O95436 690 aa12.18□□□□□ -0.46
SSBP2-204ENST00000504985 ARSIQ5FYB1 569 aa12.18□□□□□ -0.46
SSBP2-204ENST00000504985 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
SSBP2-204ENST00000504985 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
SSBP2-204ENST00000504985 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.47
SSBP2-204ENST00000504985 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
SSBP2-204ENST00000504985 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
SSBP2-204ENST00000504985 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
SSBP2-204ENST00000504985 TMC2Q8TDI7 906 aa12.09□□□□□ -0.47
SSBP2-204ENST00000504985 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.48
SSBP2-204ENST00000504985 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
SSBP2-204ENST00000504985 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
SSBP2-204ENST00000504985 FOXK1P85037 733 aa12.05□□□□□ -0.48
SSBP2-204ENST00000504985 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
SSBP2-204ENST00000504985 ABCC9O60706 1549 aa12.04□□□□□ -0.48
SSBP2-204ENST00000504985 MYT1Q01538 1121 aa12.03□□□□□ -0.48
SSBP2-204ENST00000504985 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
SSBP2-204ENST00000504985 NUDT7P0C024 238 aa12.02□□□□□ -0.49
SSBP2-204ENST00000504985 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
SSBP2-204ENST00000504985 POTEEQ6S8J3 1075 aa11.98□□□□□ -0.49
SSBP2-204ENST00000504985 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
SSBP2-204ENST00000504985 DSG2Q14126 1118 aa11.97□□□□□ -0.49
SSBP2-204ENST00000504985 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
SSBP2-204ENST00000504985 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
SSBP2-204ENST00000504985 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
SSBP2-204ENST00000504985 PBX2P40425 430 aa11.92□□□□□ -0.5
SSBP2-204ENST00000504985 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
SSBP2-204ENST00000504985 PTGER2P43116 358 aa11.9□□□□□ -0.5
SSBP2-204ENST00000504985 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
SSBP2-204ENST00000504985 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
SSBP2-204ENST00000504985 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
SSBP2-204ENST00000504985 RNF166Q96A37 237 aaPredicted RBP11.88□□□□□ -0.51
SSBP2-204ENST00000504985 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
SSBP2-204ENST00000504985 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
SSBP2-204ENST00000504985 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
SSBP2-204ENST00000504985 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
SSBP2-204ENST00000504985 TBC1D12O60347 775 aa11.82□□□□□ -0.52
SSBP2-204ENST00000504985 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
SSBP2-204ENST00000504985 PDE4AP27815 886 aa11.81□□□□□ -0.52
SSBP2-204ENST00000504985 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
SSBP2-204ENST00000504985 MFSD10Q14728 455 aa11.79□□□□□ -0.52
SSBP2-204ENST00000504985 MYO15BQ96JP2 1530 aa11.77□□□□□ -0.53
SSBP2-204ENST00000504985 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
SSBP2-204ENST00000504985 TK2O00142 265 aa11.76□□□□□ -0.53
SSBP2-204ENST00000504985 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
SSBP2-204ENST00000504985 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
SSBP2-204ENST00000504985 HRO43593 1189 aa11.73□□□□□ -0.53
SSBP2-204ENST00000504985 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
SSBP2-204ENST00000504985 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
SSBP2-204ENST00000504985 DCAF8L2P0C7V8 631 aa11.72□□□□□ -0.53
SSBP2-204ENST00000504985 PSEN2P49810 448 aa11.72□□□□□ -0.53
SSBP2-204ENST00000504985 LARP6Q9BRS8 491 aaKnown RBP11.71□□□□□ -0.53
SSBP2-204ENST00000504985 NACADO15069 1562 aa11.7□□□□□ -0.54
SSBP2-204ENST00000504985 CADPS2Q86UW7 1296 aa11.7□□□□□ -0.54
SSBP2-204ENST00000504985 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
SSBP2-204ENST00000504985 FOSBP53539 338 aa11.68□□□□□ -0.54
SSBP2-204ENST00000504985 BCL2L12Q9HB09 334 aa11.67□□□□□ -0.54
SSBP2-204ENST00000504985 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
SSBP2-204ENST00000504985 SLC4A5Q9BY07 1137 aa11.65□□□□□ -0.55
SSBP2-204ENST00000504985 EVI5O60447 810 aa11.64□□□□□ -0.55
SSBP2-204ENST00000504985 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
SSBP2-204ENST00000504985 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
SSBP2-204ENST00000504985 CAMK2BQ13554 666 aa11.62□□□□□ -0.55
SSBP2-204ENST00000504985 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
SSBP2-204ENST00000504985 SHROOM4Q9ULL8 1493 aa11.61□□□□□ -0.55
SSBP2-204ENST00000504985 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
SSBP2-204ENST00000504985 KCNK17Q96T54 332 aa11.61□□□□□ -0.55
SSBP2-204ENST00000504985 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
SSBP2-204ENST00000504985 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
SSBP2-204ENST00000504985 TTBK1Q5TCY1 1321 aaPredicted RBP11.57□□□□□ -0.56
SSBP2-204ENST00000504985 BHMG1C9JSJ3 638 aaPredicted RBP11.57□□□□□ -0.56
SSBP2-204ENST00000504985 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
SSBP2-204ENST00000504985 ADAM33Q9BZ11 813 aa11.56□□□□□ -0.56
SSBP2-204ENST00000504985 HCSTQ9UBK5 93 aa11.56□□□□□ -0.56
SSBP2-204ENST00000504985 ZBED2Q9BTP6 218 aa11.55□□□□□ -0.56
SSBP2-204ENST00000504985 SCRIBQ14160 1630 aa11.55□□□□□ -0.56
SSBP2-204ENST00000504985 PTPREP23469 700 aa11.54□□□□□ -0.56
SSBP2-204ENST00000504985 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
SSBP2-204ENST00000504985 PCDHGA10Q9Y5H3 936 aa11.54□□□□□ -0.56
SSBP2-204ENST00000504985 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
SSBP2-204ENST00000504985 PHF14O94880 888 aa11.48□□□□□ -0.57
SSBP2-204ENST00000504985 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms