RNA–Protein interactions for RNA: ENST00000504842.5

PROM1-205, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-205ENST00000504842 SNPHO15079 494 aa10.51□□□□□ -0.73
PROM1-205ENST00000504842 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
PROM1-205ENST00000504842 ST18O60284 1047 aa10.5□□□□□ -0.73
PROM1-205ENST00000504842 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
PROM1-205ENST00000504842 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
PROM1-205ENST00000504842 PDCD7Q8N8D1 485 aaKnown RBP10.47□□□□□ -0.73
PROM1-205ENST00000504842 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
PROM1-205ENST00000504842 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
PROM1-205ENST00000504842 KCNV2Q8TDN2 545 aa10.43□□□□□ -0.74
PROM1-205ENST00000504842 MFRPQ9BY79 579 aa10.41□□□□□ -0.74
PROM1-205ENST00000504842 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
PROM1-205ENST00000504842 MARVELD3Q96A59 401 aa10.39□□□□□ -0.75
PROM1-205ENST00000504842 NLRP6P59044 892 aa10.38□□□□□ -0.75
PROM1-205ENST00000504842 DPY19L2Q6NUT2 758 aa10.37□□□□□ -0.75
PROM1-205ENST00000504842 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
PROM1-205ENST00000504842 SOX12O15370 315 aa10.36□□□□□ -0.75
PROM1-205ENST00000504842 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.75
PROM1-205ENST00000504842 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
PROM1-205ENST00000504842 GTF3C3Q9Y5Q9 886 aa10.35□□□□□ -0.75
PROM1-205ENST00000504842 EMP3P54852 163 aa10.34□□□□□ -0.75
PROM1-205ENST00000504842 TMEM132AQ24JP5 1023 aa10.34□□□□□ -0.75
PROM1-205ENST00000504842 ARHGEF1Q92888 912 aaKnown RBP10.34□□□□□ -0.75
PROM1-205ENST00000504842 ERICH6Q7L0X2 663 aa10.33□□□□□ -0.76
PROM1-205ENST00000504842 EFCAB3Q8N7B9 438 aa10.33□□□□□ -0.76
PROM1-205ENST00000504842 E2F4Q16254 413 aa10.32□□□□□ -0.76
PROM1-205ENST00000504842 PPP1R37O75864 691 aa10.3□□□□□ -0.76
PROM1-205ENST00000504842 FBXO22Q8NEZ5 403 aa10.3□□□□□ -0.76
PROM1-205ENST00000504842 PHF8Q9UPP1 1060 aa10.29□□□□□ -0.76
PROM1-205ENST00000504842 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
PROM1-205ENST00000504842 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
PROM1-205ENST00000504842 FAM205CA6NFA0 338 aa10.25□□□□□ -0.77
PROM1-205ENST00000504842 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
PROM1-205ENST00000504842 PDE4AP27815 886 aa10.23□□□□□ -0.77
PROM1-205ENST00000504842 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
PROM1-205ENST00000504842 DOK7Q18PE1 504 aa10.21□□□□□ -0.77
PROM1-205ENST00000504842 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
PROM1-205ENST00000504842 LARP6Q9BRS8 491 aaKnown RBP10.21□□□□□ -0.77
PROM1-205ENST00000504842 TESPA1A2RU30 521 aaPredicted RBP10.2□□□□□ -0.78
PROM1-205ENST00000504842 RIMBP2O15034 1052 aa10.2□□□□□ -0.78
PROM1-205ENST00000504842 SEMA3EO15041 775 aa10.2□□□□□ -0.78
PROM1-205ENST00000504842 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
PROM1-205ENST00000504842 SPNS2Q8IVW8 549 aa10.18□□□□□ -0.78
PROM1-205ENST00000504842 NCKAP5LQ9HCH0 1330 aa10.17□□□□□ -0.78
PROM1-205ENST00000504842 MICALL2Q8IY33 904 aa10.17□□□□□ -0.78
PROM1-205ENST00000504842 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
PROM1-205ENST00000504842 ERBB3P21860 1342 aa10.15□□□□□ -0.78
PROM1-205ENST00000504842 HOXB3P14651 431 aaPredicted RBP10.15□□□□□ -0.78
PROM1-205ENST00000504842 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
PROM1-205ENST00000504842 MFSD10Q14728 455 aa10.15□□□□□ -0.78
PROM1-205ENST00000504842 BRPF1P55201 1214 aaPredicted RBP10.14□□□□□ -0.79
PROM1-205ENST00000504842 MS4A4AQ96JQ5 239 aa10.13□□□□□ -0.79
PROM1-205ENST00000504842 CRISPLD2Q9H0B8 497 aa10.13□□□□□ -0.79
PROM1-205ENST00000504842 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
PROM1-205ENST00000504842 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
PROM1-205ENST00000504842 HOXB1P14653 301 aaPredicted RBP10.11□□□□□ -0.79
PROM1-205ENST00000504842 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
PROM1-205ENST00000504842 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
PROM1-205ENST00000504842 SLC24A3Q9HC58 644 aa10.1□□□□□ -0.79
PROM1-205ENST00000504842 C14orf37Q86TY3 774 aa10.09□□□□□ -0.79
PROM1-205ENST00000504842 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
PROM1-205ENST00000504842 ZMYND10O75800 440 aa10.06□□□□□ -0.8
PROM1-205ENST00000504842 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
PROM1-205ENST00000504842 TMEM92Q6UXU6 159 aa10.06□□□□□ -0.8
PROM1-205ENST00000504842 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
PROM1-205ENST00000504842 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
PROM1-205ENST00000504842 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
PROM1-205ENST00000504842 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
PROM1-205ENST00000504842 BARGINQ6ZT62 677 aa10.01□□□□□ -0.81
PROM1-205ENST00000504842 GPHNQ9NQX3 736 aaPredicted RBP10□□□□□ -0.81
PROM1-205ENST00000504842 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
PROM1-205ENST00000504842 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
PROM1-205ENST00000504842 ARSIQ5FYB1 569 aa9.98□□□□□ -0.81
PROM1-205ENST00000504842 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
PROM1-205ENST00000504842 AK7Q96M32 723 aa9.97□□□□□ -0.81
PROM1-205ENST00000504842 ARXQ96QS3 562 aa9.97□□□□□ -0.81
PROM1-205ENST00000504842 SPDYE16A6NNV3 312 aaPredicted RBP9.96□□□□□ -0.82
PROM1-205ENST00000504842 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.82
PROM1-205ENST00000504842 MLLT3P42568 568 aaPredicted RBP9.95□□□□□ -0.82
PROM1-205ENST00000504842 GPR153Q6NV75 609 aa9.95□□□□□ -0.82
PROM1-205ENST00000504842 TMC2Q8TDI7 906 aa9.94□□□□□ -0.82
PROM1-205ENST00000504842 DPYSL4O14531 572 aa9.92□□□□□ -0.82
PROM1-205ENST00000504842 ZNF687Q8N1G0 1237 aa9.92□□□□□ -0.82
PROM1-205ENST00000504842 KHSRPQ92945 711 aaKnown RBP eCLIP9.92□□□□□ -0.82
PROM1-205ENST00000504842 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
PROM1-205ENST00000504842 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
PROM1-205ENST00000504842 DSG2Q14126 1118 aa9.9□□□□□ -0.82
PROM1-205ENST00000504842 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
PROM1-205ENST00000504842 PDIA6Q15084 440 aa9.89□□□□□ -0.83
PROM1-205ENST00000504842 ANKRD13DQ6ZTN6 518 aa9.89□□□□□ -0.83
PROM1-205ENST00000504842 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
PROM1-205ENST00000504842 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
PROM1-205ENST00000504842 FOXK1P85037 733 aa9.88□□□□□ -0.83
PROM1-205ENST00000504842 NUDT7P0C024 238 aa9.87□□□□□ -0.83
PROM1-205ENST00000504842 GPBP1L1Q9HC44 474 aaPredicted RBP9.84□□□□□ -0.83
PROM1-205ENST00000504842 KIF3CO14782 793 aa9.83□□□□□ -0.84
PROM1-205ENST00000504842 TRIM66O15016 1216 aa9.83□□□□□ -0.84
PROM1-205ENST00000504842 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
PROM1-205ENST00000504842 KDM4CQ9H3R0 1056 aa9.83□□□□□ -0.84
PROM1-205ENST00000504842 PTGER2P43116 358 aa9.82□□□□□ -0.84
PROM1-205ENST00000504842 MAP3K9P80192 1104 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms