RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 SCAPERQ9BY12 1400 aa27.92■■■□□ 2.06
SDHA-205ENST00000504824 MAGI2Q86UL8 1455 aa27.92■■■□□ 2.06
SDHA-205ENST00000504824 TROQ12816 1431 aaPredicted RBP27.91■■■□□ 2.06
SDHA-205ENST00000504824 CASKIN1Q8WXD9 1431 aa27.91■■■□□ 2.06
SDHA-205ENST00000504824 RIMS1Q86UR5 1692 aaKnown RBP27.86■■■□□ 2.05
SDHA-205ENST00000504824 YEATS2Q9ULM3 1422 aa27.86■■■□□ 2.05
SDHA-205ENST00000504824 ILDR1Q86SU0 546 aaPredicted RBP27.84■■■□□ 2.05
SDHA-205ENST00000504824 ARHGAP5Q13017 1502 aa27.84■■■□□ 2.05
SDHA-205ENST00000504824 PCF11O94913 1555 aaKnown RBP27.84■■■□□ 2.05
SDHA-205ENST00000504824 CCDC18Q5T9S5 1454 aa27.84■■■□□ 2.05
SDHA-205ENST00000504824 LRRIQ1Q96JM4 1722 aa27.84■■■□□ 2.05
SDHA-205ENST00000504824 FYCO1Q9BQS8 1478 aa27.79■■■□□ 2.04
SDHA-205ENST00000504824 ZNF518AQ6AHZ1 1483 aa27.77■■■□□ 2.04
SDHA-205ENST00000504824 MLECQ14165 292 aa27.77■■■□□ 2.04
SDHA-205ENST00000504824 PLPPR3Q6T4P5 718 aa27.76■■■□□ 2.04
SDHA-205ENST00000504824 MYT1LQ9UL68 1186 aa27.76■■■□□ 2.04
SDHA-205ENST00000504824 ATP10AO60312 1499 aa27.76■■■□□ 2.03
SDHA-205ENST00000504824 C9orf84Q5VXU9 1444 aa27.76■■■□□ 2.03
SDHA-205ENST00000504824 LOC105371045A0A1W2PR82 267 aa27.75■■■□□ 2.03
SDHA-205ENST00000504824 CEP162Q5TB80 1403 aa27.72■■■□□ 2.03
SDHA-205ENST00000504824 SIGLEC1Q9BZZ2 1709 aa27.72■■■□□ 2.03
SDHA-205ENST00000504824 FER1L4A9Z1Z3 1794 aa27.72■■■□□ 2.03
SDHA-205ENST00000504824 LMTK3Q96Q04 1460 aa27.7■■■□□ 2.02
SDHA-205ENST00000504824 PREX2Q70Z35 1606 aa27.69■■■□□ 2.02
SDHA-205ENST00000504824 CDC42BPBQ9Y5S2 1711 aa27.69■■■□□ 2.02
SDHA-205ENST00000504824 KDM5CP41229 1560 aa27.68■■■□□ 2.02
SDHA-205ENST00000504824 AFAP1Q8N556 730 aa27.67■■■□□ 2.02
SDHA-205ENST00000504824 ARHGEF12Q9NZN5 1544 aa27.63■■■□□ 2.01
SDHA-205ENST00000504824 ABCC1P33527 1531 aa27.62■■■□□ 2.01
SDHA-205ENST00000504824 DIP2CQ9Y2E4 1556 aa27.6■■■□□ 2.01
SDHA-205ENST00000504824 ITSN2Q9NZM3 1697 aa27.59■■■□□ 2.01
SDHA-205ENST00000504824 MLH3Q9UHC1 1453 aa27.59■■■□□ 2.01
SDHA-205ENST00000504824 CDC42BPAQ5VT25 1732 aa27.58■■■□□ 2.01
SDHA-205ENST00000504824 HSPA2P54652 639 aa27.56■■■□□ 2
SDHA-205ENST00000504824 TRAPPC8Q9Y2L5 1435 aa27.56■■■□□ 2
SDHA-205ENST00000504824 REREQ9P2R6 1566 aa27.55■■■□□ 2
SDHA-205ENST00000504824 ZNF777Q9ULD5 760 aaPredicted RBP27.55■■■□□ 2
SDHA-205ENST00000504824 ABCA6Q8N139 1617 aa27.55■■■□□ 2
SDHA-205ENST00000504824 MTUS2Q5JR59 1369 aa27.54■■■□□ 2
SDHA-205ENST00000504824 ESF1Q9H501 851 aaKnown RBP27.52■■■□□ 2
SDHA-205ENST00000504824 FBXO41Q8TF61 875 aa27.5■■□□□ 1.99
SDHA-205ENST00000504824 PREX1Q8TCU6 1659 aa27.49■■□□□ 1.99
SDHA-205ENST00000504824 GPATCH8Q9UKJ3 1502 aaKnown RBP27.48■■□□□ 1.99
SDHA-205ENST00000504824 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
SDHA-205ENST00000504824 AGLP35573 1532 aa27.47■■□□□ 1.99
SDHA-205ENST00000504824 CEBPAP49715 358 aaPredicted RBP27.47■■□□□ 1.99
SDHA-205ENST00000504824 SAMD9LQ8IVG5 1584 aa27.46■■□□□ 1.99
SDHA-205ENST00000504824 SYCP2Q9BX26 1530 aa27.45■■□□□ 1.99
SDHA-205ENST00000504824 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
SDHA-205ENST00000504824 KIDINS220Q9ULH0 1771 aa27.45■■□□□ 1.98
SDHA-205ENST00000504824 PLEKHH2Q8IVE3 1493 aa27.45■■□□□ 1.98
SDHA-205ENST00000504824 SPAG9O60271 1321 aaKnown RBP27.42■■□□□ 1.98
SDHA-205ENST00000504824 UHRF1BP1Q6BDS2 1440 aa27.41■■□□□ 1.98
SDHA-205ENST00000504824 VPS8Q8N3P4 1428 aa27.41■■□□□ 1.98
SDHA-205ENST00000504824 EHBP1L1Q8N3D4 1523 aa27.4■■□□□ 1.98
SDHA-205ENST00000504824 HNRNPMP52272 730 aaKnown RBP eCLIP27.4■■□□□ 1.98
SDHA-205ENST00000504824 SETD1BQ9UPS6 1966 aaKnown RBP27.39■■□□□ 1.98
SDHA-205ENST00000504824 KIAA1107Q9UPP5 1409 aa27.39■■□□□ 1.97
SDHA-205ENST00000504824 CNTLNQ9NXG0 1405 aa27.37■■□□□ 1.97
SDHA-205ENST00000504824 C3P01024 1663 aa27.36■■□□□ 1.97
SDHA-205ENST00000504824 ATP7AQ04656 1500 aa27.35■■□□□ 1.97
SDHA-205ENST00000504824 TIAM1Q13009 1591 aa27.31■■□□□ 1.96
SDHA-205ENST00000504824 DMRT2Q9Y5R5 561 aa27.31■■□□□ 1.96
SDHA-205ENST00000504824 SUPT6HQ7KZ85 1726 aaKnown RBP27.3■■□□□ 1.96
SDHA-205ENST00000504824 INO80Q9ULG1 1556 aaPredicted RBP27.3■■□□□ 1.96
SDHA-205ENST00000504824 ZNF644Q9H582 1327 aaPredicted RBP27.28■■□□□ 1.96
SDHA-205ENST00000504824 NCOA2Q15596 1464 aa27.27■■□□□ 1.96
SDHA-205ENST00000504824 A2MP01023 1474 aa27.26■■□□□ 1.95
SDHA-205ENST00000504824 MROH2AA6NES4 1674 aa27.25■■□□□ 1.95
SDHA-205ENST00000504824 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
SDHA-205ENST00000504824 CERKQ8TCT0 537 aa27.24■■□□□ 1.95
SDHA-205ENST00000504824 PLXNC1O60486 1568 aa27.22■■□□□ 1.95
SDHA-205ENST00000504824 KANK4Q5T7N3 995 aaPredicted RBP27.22■■□□□ 1.95
SDHA-205ENST00000504824 ADGBQ8N7X0 1667 aa27.22■■□□□ 1.95
SDHA-205ENST00000504824 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
SDHA-205ENST00000504824 STRCQ7RTU9 1775 aa27.2■■□□□ 1.94
SDHA-205ENST00000504824 NPATQ14207 1427 aa27.19■■□□□ 1.94
SDHA-205ENST00000504824 ZMYM3Q14202 1370 aa27.19■■□□□ 1.94
SDHA-205ENST00000504824 APLP2Q06481 763 aa27.18■■□□□ 1.94
SDHA-205ENST00000504824 GGT6Q6P531 493 aa27.18■■□□□ 1.94
SDHA-205ENST00000504824 CLTCQ00610 1675 aaKnown RBP27.17■■□□□ 1.94
SDHA-205ENST00000504824 MBD5Q9P267 1494 aa27.17■■□□□ 1.94
SDHA-205ENST00000504824 RTEL1-TNFRSF6BF6WH68 1400 aa27.15■■□□□ 1.94
SDHA-205ENST00000504824 PTPRTO14522 1441 aa27.13■■□□□ 1.93
SDHA-205ENST00000504824 RSPH4AQ5TD94 716 aa27.13■■□□□ 1.93
SDHA-205ENST00000504824 PPP6R1Q9UPN7 881 aa27.13■■□□□ 1.93
SDHA-205ENST00000504824 CCDC141Q6ZP82 1450 aa27.12■■□□□ 1.93
SDHA-205ENST00000504824 CAMSAP2Q08AD1 1489 aa27.12■■□□□ 1.93
SDHA-205ENST00000504824 NCOA1Q15788 1441 aa27.08■■□□□ 1.93
SDHA-205ENST00000504824 DHX29Q7Z478 1369 aaKnown RBP27.07■■□□□ 1.92
SDHA-205ENST00000504824 CAMSAP1Q5T5Y3 1602 aa27.06■■□□□ 1.92
SDHA-205ENST00000504824 MYO3AQ8NEV4 1616 aa27.05■■□□□ 1.92
SDHA-205ENST00000504824 PTPRKQ15262 1439 aa27.03■■□□□ 1.92
SDHA-205ENST00000504824 TSPY4P0CV99 314 aa27.03■■□□□ 1.92
SDHA-205ENST00000504824 TSPY10P0CW01 314 aa27.03■■□□□ 1.92
SDHA-205ENST00000504824 KIF3BO15066 747 aa27.02■■□□□ 1.92
SDHA-205ENST00000504824 ZNF142P52746 1687 aaPredicted RBP27.02■■□□□ 1.92
SDHA-205ENST00000504824 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.91
SDHA-205ENST00000504824 ARHGEF5Q12774 1597 aa27.01■■□□□ 1.91
SDHA-205ENST00000504824 MIA2Q96PC5 1412 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms