RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CAMSAP2Q08AD1 1489 aa19.8■□□□□ 0.76
LMNA-220ENST00000504687 ROCK1Q13464 1354 aa19.8■□□□□ 0.76
LMNA-220ENST00000504687 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
LMNA-220ENST00000504687 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
LMNA-220ENST00000504687 CROCC2H7BZ55 1655 aa19.78■□□□□ 0.76
LMNA-220ENST00000504687 DAPK1P53355 1430 aa19.78■□□□□ 0.76
LMNA-220ENST00000504687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.76
LMNA-220ENST00000504687 CDC42BPBQ9Y5S2 1711 aa19.78■□□□□ 0.76
LMNA-220ENST00000504687 MYO5CQ9NQX4 1742 aa19.77■□□□□ 0.76
LMNA-220ENST00000504687 ITGAEP38570 1179 aa19.77■□□□□ 0.76
LMNA-220ENST00000504687 NAIPQ13075 1403 aa19.76■□□□□ 0.75
LMNA-220ENST00000504687 ARAP3Q8WWN8 1544 aa19.76■□□□□ 0.75
LMNA-220ENST00000504687 ARHGEF5Q12774 1597 aa19.76■□□□□ 0.75
LMNA-220ENST00000504687 CFDP1Q9UEE9 299 aaPredicted RBP19.76■□□□□ 0.75
LMNA-220ENST00000504687 ABCC5O15440 1437 aa19.76■□□□□ 0.75
LMNA-220ENST00000504687 ADGBQ8N7X0 1667 aa19.75■□□□□ 0.75
LMNA-220ENST00000504687 TTC37Q6PGP7 1564 aa19.74■□□□□ 0.75
LMNA-220ENST00000504687 SHANK2Q9UPX8 1470 aa19.74■□□□□ 0.75
LMNA-220ENST00000504687 ADGRL2O95490 1459 aa19.73■□□□□ 0.75
LMNA-220ENST00000504687 WDR7Q9Y4E6 1490 aa19.72■□□□□ 0.75
LMNA-220ENST00000504687 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
LMNA-220ENST00000504687 PLEKHH2Q8IVE3 1493 aa19.69■□□□□ 0.74
LMNA-220ENST00000504687 ABCA9Q8IUA7 1624 aa19.69■□□□□ 0.74
LMNA-220ENST00000504687 PLCH2O75038 1416 aa19.68■□□□□ 0.74
LMNA-220ENST00000504687 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
LMNA-220ENST00000504687 KIAA1107Q9UPP5 1409 aa19.67■□□□□ 0.74
LMNA-220ENST00000504687 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
LMNA-220ENST00000504687 ZNF644Q9H582 1327 aaPredicted RBP19.66■□□□□ 0.74
LMNA-220ENST00000504687 MAST1Q9Y2H9 1570 aa19.65■□□□□ 0.74
LMNA-220ENST00000504687 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
LMNA-220ENST00000504687 ARHGAP5Q13017 1502 aa19.63■□□□□ 0.73
LMNA-220ENST00000504687 NCOA1Q15788 1441 aa19.62■□□□□ 0.73
LMNA-220ENST00000504687 CCDC141Q6ZP82 1450 aa19.61■□□□□ 0.73
LMNA-220ENST00000504687 ASXL2Q76L83 1435 aa19.61■□□□□ 0.73
LMNA-220ENST00000504687 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
LMNA-220ENST00000504687 ABCC1P33527 1531 aa19.57■□□□□ 0.72
LMNA-220ENST00000504687 C9orf84Q5VXU9 1444 aa19.57■□□□□ 0.72
LMNA-220ENST00000504687 KDM6BO15054 1643 aa19.56■□□□□ 0.72
LMNA-220ENST00000504687 NPM1P06748 294 aaKnown RBP eCLIP19.56■□□□□ 0.72
LMNA-220ENST00000504687 EFCAB2Q5VUJ9 269 aa19.55■□□□□ 0.72
LMNA-220ENST00000504687 SYCP2Q9BX26 1530 aa19.55■□□□□ 0.72
LMNA-220ENST00000504687 PLXNC1O60486 1568 aa19.54■□□□□ 0.72
LMNA-220ENST00000504687 ZNF777Q9ULD5 760 aaPredicted RBP19.54■□□□□ 0.72
LMNA-220ENST00000504687 RRP7BPQ9NSQ0 103 aa19.53■□□□□ 0.72
LMNA-220ENST00000504687 CHIC2Q9UKJ5 165 aa19.53■□□□□ 0.72
LMNA-220ENST00000504687 KCNH8Q96L42 1107 aa19.52■□□□□ 0.72
LMNA-220ENST00000504687 CFAP74Q9C0B2 1584 aa19.52■□□□□ 0.71
LMNA-220ENST00000504687 TSPY4P0CV99 314 aa19.51■□□□□ 0.71
LMNA-220ENST00000504687 TSPY10P0CW01 314 aa19.51■□□□□ 0.71
LMNA-220ENST00000504687 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
LMNA-220ENST00000504687 ARHGEF12Q9NZN5 1544 aa19.49■□□□□ 0.71
LMNA-220ENST00000504687 GLI2P10070 1586 aa19.48■□□□□ 0.71
LMNA-220ENST00000504687 KDM5DQ9BY66 1539 aa19.47■□□□□ 0.71
LMNA-220ENST00000504687 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
LMNA-220ENST00000504687 RTEL1-TNFRSF6BF6WH68 1400 aa19.47■□□□□ 0.71
LMNA-220ENST00000504687 FANCAO15360 1455 aa19.47■□□□□ 0.71
LMNA-220ENST00000504687 ANKRD50Q9ULJ7 1429 aa19.46■□□□□ 0.71
LMNA-220ENST00000504687 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
LMNA-220ENST00000504687 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
LMNA-220ENST00000504687 DUOX2Q9NRD8 1548 aa19.41■□□□□ 0.7
LMNA-220ENST00000504687 MAP3K4Q9Y6R4 1608 aa19.41■□□□□ 0.7
LMNA-220ENST00000504687 PZPP20742 1482 aa19.4■□□□□ 0.7
LMNA-220ENST00000504687 UNC13BO14795 1591 aa19.4■□□□□ 0.7
LMNA-220ENST00000504687 INO80Q9ULG1 1556 aaPredicted RBP19.4■□□□□ 0.7
LMNA-220ENST00000504687 TRAPPC8Q9Y2L5 1435 aa19.39■□□□□ 0.69
LMNA-220ENST00000504687 CD109Q6YHK3 1445 aa19.38■□□□□ 0.69
LMNA-220ENST00000504687 ZFYVE16Q7Z3T8 1539 aa19.38■□□□□ 0.69
LMNA-220ENST00000504687 NEO1Q92859 1461 aa19.38■□□□□ 0.69
LMNA-220ENST00000504687 ERBINQ96RT1 1412 aa19.38■□□□□ 0.69
LMNA-220ENST00000504687 MPHOSPH9Q99550 1183 aa19.38■□□□□ 0.69
LMNA-220ENST00000504687 KIF13AQ9H1H9 1805 aa19.37■□□□□ 0.69
LMNA-220ENST00000504687 ADGRL1O94910 1474 aa19.37■□□□□ 0.69
LMNA-220ENST00000504687 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
LMNA-220ENST00000504687 MAGI2Q86UL8 1455 aa19.35■□□□□ 0.69
LMNA-220ENST00000504687 TRIM52Q96A61 297 aa19.34■□□□□ 0.69
LMNA-220ENST00000504687 KDM5CP41229 1560 aa19.34■□□□□ 0.69
LMNA-220ENST00000504687 SCAPERQ9BY12 1400 aa19.33■□□□□ 0.68
LMNA-220ENST00000504687 DIP2BQ9P265 1576 aa19.32■□□□□ 0.68
LMNA-220ENST00000504687 ATP7AQ04656 1500 aa19.32■□□□□ 0.68
LMNA-220ENST00000504687 ZNF518AQ6AHZ1 1483 aa19.32■□□□□ 0.68
LMNA-220ENST00000504687 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
LMNA-220ENST00000504687 EIF2AK4Q9P2K8 1649 aaKnown RBP19.31■□□□□ 0.68
LMNA-220ENST00000504687 IQGAP3Q86VI3 1631 aa19.3■□□□□ 0.68
LMNA-220ENST00000504687 SPAG9O60271 1321 aaKnown RBP19.29■□□□□ 0.68
LMNA-220ENST00000504687 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
LMNA-220ENST00000504687 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
LMNA-220ENST00000504687 MLH3Q9UHC1 1453 aa19.28■□□□□ 0.68
LMNA-220ENST00000504687 POGZQ7Z3K3 1410 aa19.27■□□□□ 0.68
LMNA-220ENST00000504687 KIDINS220Q9ULH0 1771 aa19.27■□□□□ 0.68
LMNA-220ENST00000504687 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.67
LMNA-220ENST00000504687 SLC4A1APQ9BWU0 796 aaKnown RBP19.26■□□□□ 0.67
LMNA-220ENST00000504687 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
LMNA-220ENST00000504687 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
LMNA-220ENST00000504687 NUP155O75694 1391 aa19.25■□□□□ 0.67
LMNA-220ENST00000504687 FAM69CQ0P6D2 419 aa19.25■□□□□ 0.67
LMNA-220ENST00000504687 BCORL1Q5H9F3 1711 aa19.24■□□□□ 0.67
LMNA-220ENST00000504687 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
LMNA-220ENST00000504687 AFAP1Q8N556 730 aa19.23■□□□□ 0.67
LMNA-220ENST00000504687 RICTORQ6R327 1708 aa19.22■□□□□ 0.67
LMNA-220ENST00000504687 TONSLQ96HA7 1378 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms