RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 CFDP1Q9UEE9 299 aaPredicted RBP28.25■■■□□ 2.11
DDR1-254ENST00000504679 AKNAQ7Z591 1439 aa28.24■■■□□ 2.11
DDR1-254ENST00000504679 CFAP74Q9C0B2 1584 aa28.24■■■□□ 2.11
DDR1-254ENST00000504679 CDC42BPAQ5VT25 1732 aa28.23■■■□□ 2.11
DDR1-254ENST00000504679 CDC42BPBQ9Y5S2 1711 aa28.22■■■□□ 2.11
DDR1-254ENST00000504679 KDM6BO15054 1643 aa28.21■■■□□ 2.11
DDR1-254ENST00000504679 ZNF777Q9ULD5 760 aaPredicted RBP28.21■■■□□ 2.11
DDR1-254ENST00000504679 PREX2Q70Z35 1606 aa28.21■■■□□ 2.11
DDR1-254ENST00000504679 PPARGC1BQ86YN6 1023 aaKnown RBP28.16■■■□□ 2.1
DDR1-254ENST00000504679 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
DDR1-254ENST00000504679 ITSN2Q9NZM3 1697 aa28.15■■■□□ 2.1
DDR1-254ENST00000504679 SCAPERQ9BY12 1400 aa28.13■■■□□ 2.09
DDR1-254ENST00000504679 ADGRL1O94910 1474 aa28.13■■■□□ 2.09
DDR1-254ENST00000504679 RAPGEF3O95398 923 aa28.12■■■□□ 2.09
DDR1-254ENST00000504679 DENND4BO75064 1496 aaPredicted RBP28.11■■■□□ 2.09
DDR1-254ENST00000504679 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
DDR1-254ENST00000504679 ZNF644Q9H582 1327 aaPredicted RBP28.06■■■□□ 2.08
DDR1-254ENST00000504679 HNRNPMP52272 730 aaKnown RBP eCLIP28.05■■■□□ 2.08
DDR1-254ENST00000504679 PLEKHH2Q8IVE3 1493 aa28.05■■■□□ 2.08
DDR1-254ENST00000504679 MIA2Q96PC5 1412 aa28.05■■■□□ 2.08
DDR1-254ENST00000504679 SAMD9LQ8IVG5 1584 aa28.03■■■□□ 2.08
DDR1-254ENST00000504679 KIAA1107Q9UPP5 1409 aa28.03■■■□□ 2.08
DDR1-254ENST00000504679 AFAP1Q8N556 730 aa28.01■■■□□ 2.07
DDR1-254ENST00000504679 ABCC1P33527 1531 aa28■■■□□ 2.07
DDR1-254ENST00000504679 RSPH4AQ5TD94 716 aa27.99■■■□□ 2.07
DDR1-254ENST00000504679 ARHGEF12Q9NZN5 1544 aa27.98■■■□□ 2.07
DDR1-254ENST00000504679 POGZQ7Z3K3 1410 aa27.98■■■□□ 2.07
DDR1-254ENST00000504679 RICTORQ6R327 1708 aa27.98■■■□□ 2.07
DDR1-254ENST00000504679 ZNF518AQ6AHZ1 1483 aa27.97■■■□□ 2.07
DDR1-254ENST00000504679 MYT1LQ9UL68 1186 aa27.97■■■□□ 2.07
DDR1-254ENST00000504679 CAMSAP2Q08AD1 1489 aa27.95■■■□□ 2.07
DDR1-254ENST00000504679 FGD6Q6ZV73 1430 aa27.95■■■□□ 2.07
DDR1-254ENST00000504679 TRAPPC8Q9Y2L5 1435 aa27.95■■■□□ 2.07
DDR1-254ENST00000504679 SYCP2Q9BX26 1530 aa27.94■■■□□ 2.06
DDR1-254ENST00000504679 FRMPD1Q5SYB0 1578 aa27.93■■■□□ 2.06
DDR1-254ENST00000504679 MBD5Q9P267 1494 aa27.9■■■□□ 2.06
DDR1-254ENST00000504679 PTPN23Q9H3S7 1636 aa27.9■■■□□ 2.06
DDR1-254ENST00000504679 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
DDR1-254ENST00000504679 TSPY4P0CV99 314 aa27.89■■■□□ 2.06
DDR1-254ENST00000504679 TSPY10P0CW01 314 aa27.89■■■□□ 2.06
DDR1-254ENST00000504679 SPAG9O60271 1321 aaKnown RBP27.89■■■□□ 2.05
DDR1-254ENST00000504679 FAM50AQ14320 339 aaKnown RBP27.88■■■□□ 2.05
DDR1-254ENST00000504679 ZMYM4Q5VZL5 1548 aa27.87■■■□□ 2.05
DDR1-254ENST00000504679 KDM5CP41229 1560 aa27.86■■■□□ 2.05
DDR1-254ENST00000504679 TCOF1Q13428 1488 aaKnown RBP27.85■■■□□ 2.05
DDR1-254ENST00000504679 MLH3Q9UHC1 1453 aa27.84■■■□□ 2.05
DDR1-254ENST00000504679 CCDC141Q6ZP82 1450 aa27.83■■■□□ 2.04
DDR1-254ENST00000504679 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
DDR1-254ENST00000504679 ZFYVE16Q7Z3T8 1539 aa27.81■■■□□ 2.04
DDR1-254ENST00000504679 HECW2Q9P2P5 1572 aa27.79■■■□□ 2.04
DDR1-254ENST00000504679 YEATS2Q9ULM3 1422 aa27.79■■■□□ 2.04
DDR1-254ENST00000504679 RTEL1-TNFRSF6BF6WH68 1400 aa27.76■■■□□ 2.04
DDR1-254ENST00000504679 ATP10AO60312 1499 aa27.75■■■□□ 2.03
DDR1-254ENST00000504679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.74■■■□□ 2.03
DDR1-254ENST00000504679 KIDINS220Q9ULH0 1771 aa27.74■■■□□ 2.03
DDR1-254ENST00000504679 ABCC5O15440 1437 aa27.73■■■□□ 2.03
DDR1-254ENST00000504679 ATP7AQ04656 1500 aa27.72■■■□□ 2.03
DDR1-254ENST00000504679 ARHGEF40Q8TER5 1519 aa27.72■■■□□ 2.03
DDR1-254ENST00000504679 DAPK1P53355 1430 aa27.72■■■□□ 2.03
DDR1-254ENST00000504679 RRBP1Q9P2E9 1410 aaKnown RBP27.72■■■□□ 2.03
DDR1-254ENST00000504679 ARID4BQ4LE39 1312 aaPredicted RBP27.71■■■□□ 2.03
DDR1-254ENST00000504679 DNMT1P26358 1616 aaKnown RBP27.7■■■□□ 2.02
DDR1-254ENST00000504679 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
DDR1-254ENST00000504679 C9orf84Q5VXU9 1444 aa27.68■■■□□ 2.02
DDR1-254ENST00000504679 ITGAEP38570 1179 aa27.67■■■□□ 2.02
DDR1-254ENST00000504679 CHIC2Q9UKJ5 165 aa27.67■■■□□ 2.02
DDR1-254ENST00000504679 DIP2CQ9Y2E4 1556 aa27.66■■■□□ 2.02
DDR1-254ENST00000504679 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
DDR1-254ENST00000504679 ABCA6Q8N139 1617 aa27.66■■■□□ 2.02
DDR1-254ENST00000504679 SHANK2Q9UPX8 1470 aa27.64■■■□□ 2.01
DDR1-254ENST00000504679 CROCC2H7BZ55 1655 aa27.62■■■□□ 2.01
DDR1-254ENST00000504679 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
DDR1-254ENST00000504679 ANKRD30AQ9BXX3 1397 aa27.6■■■□□ 2.01
DDR1-254ENST00000504679 A2MP01023 1474 aa27.6■■■□□ 2.01
DDR1-254ENST00000504679 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
DDR1-254ENST00000504679 ADGBQ8N7X0 1667 aa27.59■■■□□ 2.01
DDR1-254ENST00000504679 REREQ9P2R6 1566 aa27.59■■■□□ 2.01
DDR1-254ENST00000504679 MLECQ14165 292 aa27.55■■■□□ 2
DDR1-254ENST00000504679 PTPRKQ15262 1439 aa27.55■■■□□ 2
DDR1-254ENST00000504679 NCOA1Q15788 1441 aa27.55■■■□□ 2
DDR1-254ENST00000504679 PLXNC1O60486 1568 aa27.53■■■□□ 2
DDR1-254ENST00000504679 AGLP35573 1532 aa27.53■■■□□ 2
DDR1-254ENST00000504679 KIF15Q9NS87 1388 aa27.53■■■□□ 2
DDR1-254ENST00000504679 ADGRL2O95490 1459 aa27.51■■■□□ 2
DDR1-254ENST00000504679 SIGLEC1Q9BZZ2 1709 aa27.5■■□□□ 1.99
DDR1-254ENST00000504679 KIF3BO15066 747 aa27.5■■□□□ 1.99
DDR1-254ENST00000504679 ROCK1Q13464 1354 aa27.49■■□□□ 1.99
DDR1-254ENST00000504679 KDM4FA0A1W2PPD8 638 aa27.49■■□□□ 1.99
DDR1-254ENST00000504679 DUOX2Q9NRD8 1548 aa27.49■■□□□ 1.99
DDR1-254ENST00000504679 GGT6Q6P531 493 aa27.47■■□□□ 1.99
DDR1-254ENST00000504679 BCORL1Q5H9F3 1711 aa27.47■■□□□ 1.99
DDR1-254ENST00000504679 ESF1Q9H501 851 aaKnown RBP27.45■■□□□ 1.98
DDR1-254ENST00000504679 PPP6R1Q9UPN7 881 aa27.42■■□□□ 1.98
DDR1-254ENST00000504679 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
DDR1-254ENST00000504679 ADAMTSL3P82987 1691 aa27.4■■□□□ 1.98
DDR1-254ENST00000504679 ANKRD50Q9ULJ7 1429 aa27.38■■□□□ 1.97
DDR1-254ENST00000504679 EIF2AK4Q9P2K8 1649 aaKnown RBP27.37■■□□□ 1.97
DDR1-254ENST00000504679 MADDQ8WXG6 1647 aa27.32■■□□□ 1.96
DDR1-254ENST00000504679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.32■■□□□ 1.96
DDR1-254ENST00000504679 WASHC2CQ9Y4E1 1318 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms