RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 DEF6Q9H4E7 631 aa13.11□□□□□ -0.31
ITGA1-203ENST00000504669 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
ITGA1-203ENST00000504669 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
ITGA1-203ENST00000504669 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
ITGA1-203ENST00000504669 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
ITGA1-203ENST00000504669 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
ITGA1-203ENST00000504669 TNNT1P13805 278 aa13.08□□□□□ -0.32
ITGA1-203ENST00000504669 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
ITGA1-203ENST00000504669 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
ITGA1-203ENST00000504669 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
ITGA1-203ENST00000504669 GIMAP7Q8NHV1 300 aa13.06□□□□□ -0.32
ITGA1-203ENST00000504669 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
ITGA1-203ENST00000504669 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
ITGA1-203ENST00000504669 TONSLQ96HA7 1378 aa13.05□□□□□ -0.32
ITGA1-203ENST00000504669 PLCD4Q9BRC7 762 aa13.05□□□□□ -0.32
ITGA1-203ENST00000504669 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
ITGA1-203ENST00000504669 FRAT1Q92837 279 aaPredicted RBP13.04□□□□□ -0.32
ITGA1-203ENST00000504669 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
ITGA1-203ENST00000504669 H0YHG0 523 aa13.03□□□□□ -0.32
ITGA1-203ENST00000504669 SSR1P43307 286 aaKnown RBP13.03□□□□□ -0.32
ITGA1-203ENST00000504669 RBM25P49756 843 aaKnown RBP13.02□□□□□ -0.33
ITGA1-203ENST00000504669 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
ITGA1-203ENST00000504669 PHF14O94880 888 aa13.01□□□□□ -0.33
ITGA1-203ENST00000504669 LEKR1Q6ZMV7 388 aa13.01□□□□□ -0.33
ITGA1-203ENST00000504669 GTF2A1P52655 376 aaPredicted RBP13.01□□□□□ -0.33
ITGA1-203ENST00000504669 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
ITGA1-203ENST00000504669 USP8P40818 1118 aa13□□□□□ -0.33
ITGA1-203ENST00000504669 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
ITGA1-203ENST00000504669 TPM4P67936 248 aa13□□□□□ -0.33
ITGA1-203ENST00000504669 ZNF592Q92610 1267 aa12.99□□□□□ -0.33
ITGA1-203ENST00000504669 CGNQ9P2M7 1197 aaKnown RBP12.99□□□□□ -0.33
ITGA1-203ENST00000504669 PDCL3Q9H2J4 239 aa12.99□□□□□ -0.33
ITGA1-203ENST00000504669 ARGLU1Q9NWB6 273 aaPredicted RBP12.99□□□□□ -0.33
ITGA1-203ENST00000504669 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
ITGA1-203ENST00000504669 CHMP4BQ9H444 224 aaKnown RBP12.98□□□□□ -0.33
ITGA1-203ENST00000504669 UQCRHLA0A096LP55 91 aa12.98□□□□□ -0.33
ITGA1-203ENST00000504669 UQCRHP07919 91 aa12.98□□□□□ -0.33
ITGA1-203ENST00000504669 GNL2Q13823 731 aaKnown RBP12.98□□□□□ -0.33
ITGA1-203ENST00000504669 DYDC1Q8WWB3 177 aa12.98□□□□□ -0.33
ITGA1-203ENST00000504669 CLGNO14967 610 aa12.97□□□□□ -0.33
ITGA1-203ENST00000504669 FGD1P98174 961 aa12.96□□□□□ -0.33
ITGA1-203ENST00000504669 ERICH4A6NGS2 130 aa12.96□□□□□ -0.33
ITGA1-203ENST00000504669 DIAPH3Q9NSV4 1193 aa12.96□□□□□ -0.34
ITGA1-203ENST00000504669 FAM193AP78312 1265 aa12.95□□□□□ -0.34
ITGA1-203ENST00000504669 CCDC39Q9UFE4 941 aa12.95□□□□□ -0.34
ITGA1-203ENST00000504669 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
ITGA1-203ENST00000504669 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
ITGA1-203ENST00000504669 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
ITGA1-203ENST00000504669 AK7Q96M32 723 aa12.95□□□□□ -0.34
ITGA1-203ENST00000504669 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
ITGA1-203ENST00000504669 CALCOCO1Q9P1Z2 691 aa12.93□□□□□ -0.34
ITGA1-203ENST00000504669 CCAR2Q8N163 923 aaKnown RBP12.93□□□□□ -0.34
ITGA1-203ENST00000504669 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
ITGA1-203ENST00000504669 TDO2P48775 406 aa12.91□□□□□ -0.34
ITGA1-203ENST00000504669 MRE11P49959 708 aa12.91□□□□□ -0.34
ITGA1-203ENST00000504669 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
ITGA1-203ENST00000504669 KIF3AQ9Y496 699 aa12.9□□□□□ -0.34
ITGA1-203ENST00000504669 HMMRO75330 724 aa12.89□□□□□ -0.35
ITGA1-203ENST00000504669 PSMD1Q99460 953 aa12.89□□□□□ -0.35
ITGA1-203ENST00000504669 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
ITGA1-203ENST00000504669 CCDC70Q6NSX1 233 aa12.89□□□□□ -0.35
ITGA1-203ENST00000504669 CBX1P83916 185 aa12.89□□□□□ -0.35
ITGA1-203ENST00000504669 NFKBIBQ15653 356 aa12.88□□□□□ -0.35
ITGA1-203ENST00000504669 IPO4Q8TEX9 1081 aaKnown RBP12.88□□□□□ -0.35
ITGA1-203ENST00000504669 CDR1P51861 262 aa12.88□□□□□ -0.35
ITGA1-203ENST00000504669 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
ITGA1-203ENST00000504669 KCNJ4P48050 445 aa12.88□□□□□ -0.35
ITGA1-203ENST00000504669 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
ITGA1-203ENST00000504669 PES1O00541 588 aaKnown RBP12.88□□□□□ -0.35
ITGA1-203ENST00000504669 MCCP23508 829 aa12.87□□□□□ -0.35
ITGA1-203ENST00000504669 HSP90B2PQ58FF3 399 aa12.87□□□□□ -0.35
ITGA1-203ENST00000504669 TPM3P06753 285 aa12.86□□□□□ -0.35
ITGA1-203ENST00000504669 LETM1O95202 739 aaPredicted RBP12.86□□□□□ -0.35
ITGA1-203ENST00000504669 TMX4Q9H1E5 349 aaPredicted RBP12.86□□□□□ -0.35
ITGA1-203ENST00000504669 CCDC173Q0VFZ6 552 aa12.85□□□□□ -0.35
ITGA1-203ENST00000504669 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
ITGA1-203ENST00000504669 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
ITGA1-203ENST00000504669 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
ITGA1-203ENST00000504669 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
ITGA1-203ENST00000504669 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
ITGA1-203ENST00000504669 TICAM2Q86XR7 235 aa12.84□□□□□ -0.35
ITGA1-203ENST00000504669 TIGD1Q96MW7 591 aa12.84□□□□□ -0.35
ITGA1-203ENST00000504669 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
ITGA1-203ENST00000504669 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
ITGA1-203ENST00000504669 ZRSR2Q15696 482 aaKnown RBP12.84□□□□□ -0.35
ITGA1-203ENST00000504669 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
ITGA1-203ENST00000504669 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
ITGA1-203ENST00000504669 CT47A1Q5JQC4 288 aaPredicted RBP12.83□□□□□ -0.36
ITGA1-203ENST00000504669 RUFY1Q96T51 708 aa12.83□□□□□ -0.36
ITGA1-203ENST00000504669 MPHOSPH10O00566 681 aaKnown RBP12.83□□□□□ -0.36
ITGA1-203ENST00000504669 MNS1Q8NEH6 495 aa12.82□□□□□ -0.36
ITGA1-203ENST00000504669 SARNPP82979 210 aaKnown RBP12.82□□□□□ -0.36
ITGA1-203ENST00000504669 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
ITGA1-203ENST00000504669 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
ITGA1-203ENST00000504669 EEA1Q15075 1411 aa12.81□□□□□ -0.36
ITGA1-203ENST00000504669 SENP3-EIF4A1A0A087X0R7 540 aa12.81□□□□□ -0.36
ITGA1-203ENST00000504669 PDE4AP27815 886 aa12.81□□□□□ -0.36
ITGA1-203ENST00000504669 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
ITGA1-203ENST00000504669 NASPP49321 788 aaPredicted RBP12.8□□□□□ -0.36
ITGA1-203ENST00000504669 TTLL5Q6EMB2 1281 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms