RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
DDR1-253ENST00000504651 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
DDR1-253ENST00000504651 FANCAO15360 1455 aa21.65■■□□□ 1.06
DDR1-253ENST00000504651 NEO1Q92859 1461 aa21.63■■□□□ 1.05
DDR1-253ENST00000504651 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
DDR1-253ENST00000504651 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
DDR1-253ENST00000504651 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
DDR1-253ENST00000504651 ABCC1P33527 1531 aa21.57■■□□□ 1.04
DDR1-253ENST00000504651 EFCAB2Q5VUJ9 269 aa21.57■■□□□ 1.04
DDR1-253ENST00000504651 CFDP1Q9UEE9 299 aaPredicted RBP21.57■■□□□ 1.04
DDR1-253ENST00000504651 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
DDR1-253ENST00000504651 KDM6BO15054 1643 aa21.56■■□□□ 1.04
DDR1-253ENST00000504651 ADGRL1O94910 1474 aa21.56■■□□□ 1.04
DDR1-253ENST00000504651 MIA2Q96PC5 1412 aa21.55■■□□□ 1.04
DDR1-253ENST00000504651 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
DDR1-253ENST00000504651 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
DDR1-253ENST00000504651 FGD6Q6ZV73 1430 aa21.55■■□□□ 1.04
DDR1-253ENST00000504651 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
DDR1-253ENST00000504651 SYCP2Q9BX26 1530 aa21.53■■□□□ 1.04
DDR1-253ENST00000504651 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
DDR1-253ENST00000504651 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
DDR1-253ENST00000504651 TCOF1Q13428 1488 aaKnown RBP21.49■■□□□ 1.03
DDR1-253ENST00000504651 SCAPERQ9BY12 1400 aa21.48■■□□□ 1.03
DDR1-253ENST00000504651 DENND4BO75064 1496 aaPredicted RBP21.48■■□□□ 1.03
DDR1-253ENST00000504651 FRMPD1Q5SYB0 1578 aa21.48■■□□□ 1.03
DDR1-253ENST00000504651 ARHGEF12Q9NZN5 1544 aa21.46■■□□□ 1.03
DDR1-253ENST00000504651 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
DDR1-253ENST00000504651 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
DDR1-253ENST00000504651 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
DDR1-253ENST00000504651 COL17A1Q9UMD9 1497 aaPredicted RBP21.45■■□□□ 1.02
DDR1-253ENST00000504651 ARHGEF5Q12774 1597 aa21.44■■□□□ 1.02
DDR1-253ENST00000504651 ZNF518AQ6AHZ1 1483 aa21.43■■□□□ 1.02
DDR1-253ENST00000504651 CROCC2H7BZ55 1655 aa21.43■■□□□ 1.02
DDR1-253ENST00000504651 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
DDR1-253ENST00000504651 DNMT1P26358 1616 aaKnown RBP21.41■■□□□ 1.02
DDR1-253ENST00000504651 KDM5CP41229 1560 aa21.41■■□□□ 1.02
DDR1-253ENST00000504651 TRAPPC8Q9Y2L5 1435 aa21.41■■□□□ 1.02
DDR1-253ENST00000504651 ZMYM4Q5VZL5 1548 aa21.4■■□□□ 1.02
DDR1-253ENST00000504651 CCDC141Q6ZP82 1450 aa21.4■■□□□ 1.02
DDR1-253ENST00000504651 MBD5Q9P267 1494 aa21.4■■□□□ 1.02
DDR1-253ENST00000504651 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.01
DDR1-253ENST00000504651 HECW2Q9P2P5 1572 aa21.39■■□□□ 1.01
DDR1-253ENST00000504651 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
DDR1-253ENST00000504651 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
DDR1-253ENST00000504651 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
DDR1-253ENST00000504651 DAPK1P53355 1430 aa21.34■■□□□ 1.01
DDR1-253ENST00000504651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.34■■□□□ 1.01
DDR1-253ENST00000504651 MAST1Q9Y2H9 1570 aa21.33■■□□□ 1.01
DDR1-253ENST00000504651 ATP7AQ04656 1500 aa21.33■■□□□ 1
DDR1-253ENST00000504651 ZFYVE16Q7Z3T8 1539 aa21.33■■□□□ 1
DDR1-253ENST00000504651 AFAP1Q8N556 730 aa21.32■■□□□ 1
DDR1-253ENST00000504651 ARHGEF40Q8TER5 1519 aa21.32■■□□□ 1
DDR1-253ENST00000504651 KIDINS220Q9ULH0 1771 aa21.32■■□□□ 1
DDR1-253ENST00000504651 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
DDR1-253ENST00000504651 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
DDR1-253ENST00000504651 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
DDR1-253ENST00000504651 ABCC5O15440 1437 aa21.3■■□□□ 1
DDR1-253ENST00000504651 MAGI2Q86UL8 1455 aa21.3■■□□□ 1
DDR1-253ENST00000504651 MLH3Q9UHC1 1453 aa21.3■■□□□ 1
DDR1-253ENST00000504651 ABCA6Q8N139 1617 aa21.29■■□□□ 1
DDR1-253ENST00000504651 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
DDR1-253ENST00000504651 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
DDR1-253ENST00000504651 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
DDR1-253ENST00000504651 DIP2CQ9Y2E4 1556 aa21.27■■□□□ 1
DDR1-253ENST00000504651 PLXNC1O60486 1568 aa21.26■□□□□ 0.99
DDR1-253ENST00000504651 RTEL1-TNFRSF6BF6WH68 1400 aa21.25■□□□□ 0.99
DDR1-253ENST00000504651 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
DDR1-253ENST00000504651 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
DDR1-253ENST00000504651 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
DDR1-253ENST00000504651 ITGAEP38570 1179 aa21.23■□□□□ 0.99
DDR1-253ENST00000504651 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
DDR1-253ENST00000504651 ADGRL2O95490 1459 aa21.2■□□□□ 0.98
DDR1-253ENST00000504651 CHIC2Q9UKJ5 165 aa21.18■□□□□ 0.98
DDR1-253ENST00000504651 REREQ9P2R6 1566 aa21.18■□□□□ 0.98
DDR1-253ENST00000504651 ANKRD30AQ9BXX3 1397 aa21.17■□□□□ 0.98
DDR1-253ENST00000504651 ATP10AO60312 1499 aa21.17■□□□□ 0.98
DDR1-253ENST00000504651 A2MP01023 1474 aa21.15■□□□□ 0.98
DDR1-253ENST00000504651 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
DDR1-253ENST00000504651 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
DDR1-253ENST00000504651 KIF15Q9NS87 1388 aa21.14■□□□□ 0.98
DDR1-253ENST00000504651 DUOX2Q9NRD8 1548 aa21.14■□□□□ 0.97
DDR1-253ENST00000504651 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
DDR1-253ENST00000504651 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
DDR1-253ENST00000504651 EIF2AK4Q9P2K8 1649 aaKnown RBP21.11■□□□□ 0.97
DDR1-253ENST00000504651 RRP7BPQ9NSQ0 103 aa21.09■□□□□ 0.97
DDR1-253ENST00000504651 AGLP35573 1532 aa21.09■□□□□ 0.97
DDR1-253ENST00000504651 BCORL1Q5H9F3 1711 aa21.07■□□□□ 0.96
DDR1-253ENST00000504651 ERBINQ96RT1 1412 aa21.07■□□□□ 0.96
DDR1-253ENST00000504651 DHX29Q7Z478 1369 aaKnown RBP21.07■□□□□ 0.96
DDR1-253ENST00000504651 TRIM26Q12899 539 aaPredicted RBP21.06■□□□□ 0.96
DDR1-253ENST00000504651 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
DDR1-253ENST00000504651 NAIPQ13075 1403 aa21.03■□□□□ 0.96
DDR1-253ENST00000504651 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
DDR1-253ENST00000504651 ARID4BQ4LE39 1312 aaPredicted RBP21.03■□□□□ 0.96
DDR1-253ENST00000504651 RNF17Q9BXT8 1623 aaKnown RBP21.02■□□□□ 0.96
DDR1-253ENST00000504651 DEPDC5O75140 1603 aa21■□□□□ 0.95
DDR1-253ENST00000504651 KIF3BO15066 747 aa20.97■□□□□ 0.95
DDR1-253ENST00000504651 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
DDR1-253ENST00000504651 UNC13BO14795 1591 aa20.97■□□□□ 0.95
DDR1-253ENST00000504651 MROH1Q8NDA8 1641 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms