RNA–Protein interactions for RNA: ENST00000504630.5

PACRGL-210, Transcript of parkin coregulated like, humanhuman

TSL 3

Gene PACRGL, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-210ENST00000504630 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.34
PACRGL-210ENST00000504630 GPATCH8Q9UKJ3 1502 aaKnown RBP23.39■■□□□ 1.34
PACRGL-210ENST00000504630 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
PACRGL-210ENST00000504630 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
PACRGL-210ENST00000504630 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
PACRGL-210ENST00000504630 APLP2Q06481 763 aa23.36■■□□□ 1.33
PACRGL-210ENST00000504630 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
PACRGL-210ENST00000504630 ADGRL1O94910 1474 aa23.34■■□□□ 1.33
PACRGL-210ENST00000504630 FRMPD1Q5SYB0 1578 aa23.33■■□□□ 1.33
PACRGL-210ENST00000504630 DENND4BO75064 1496 aaPredicted RBP23.32■■□□□ 1.32
PACRGL-210ENST00000504630 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
PACRGL-210ENST00000504630 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
PACRGL-210ENST00000504630 SCAPERQ9BY12 1400 aa23.31■■□□□ 1.32
PACRGL-210ENST00000504630 RAPGEF3O95398 923 aa23.3■■□□□ 1.32
PACRGL-210ENST00000504630 ABCC1P33527 1531 aa23.28■■□□□ 1.32
PACRGL-210ENST00000504630 SAMD9LQ8IVG5 1584 aa23.27■■□□□ 1.32
PACRGL-210ENST00000504630 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
PACRGL-210ENST00000504630 POGZQ7Z3K3 1410 aa23.26■■□□□ 1.31
PACRGL-210ENST00000504630 ZMYM4Q5VZL5 1548 aa23.24■■□□□ 1.31
PACRGL-210ENST00000504630 ARHGEF12Q9NZN5 1544 aa23.24■■□□□ 1.31
PACRGL-210ENST00000504630 ZNF777Q9ULD5 760 aaPredicted RBP23.21■■□□□ 1.31
PACRGL-210ENST00000504630 KIAA1107Q9UPP5 1409 aa23.21■■□□□ 1.31
PACRGL-210ENST00000504630 PLEKHH2Q8IVE3 1493 aa23.21■■□□□ 1.31
PACRGL-210ENST00000504630 KDM5CP41229 1560 aa23.2■■□□□ 1.3
PACRGL-210ENST00000504630 ZNF518AQ6AHZ1 1483 aa23.2■■□□□ 1.3
PACRGL-210ENST00000504630 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
PACRGL-210ENST00000504630 MYOM3Q5VTT5 1437 aa23.18■■□□□ 1.3
PACRGL-210ENST00000504630 TRAPPC8Q9Y2L5 1435 aa23.18■■□□□ 1.3
PACRGL-210ENST00000504630 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
PACRGL-210ENST00000504630 ZNF644Q9H582 1327 aaPredicted RBP23.16■■□□□ 1.3
PACRGL-210ENST00000504630 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
PACRGL-210ENST00000504630 MIA2Q96PC5 1412 aa23.16■■□□□ 1.3
PACRGL-210ENST00000504630 ARHGEF40Q8TER5 1519 aa23.14■■□□□ 1.3
PACRGL-210ENST00000504630 CAMSAP2Q08AD1 1489 aa23.13■■□□□ 1.29
PACRGL-210ENST00000504630 HNRNPMP52272 730 aaKnown RBP eCLIP23.13■■□□□ 1.29
PACRGL-210ENST00000504630 ZFYVE16Q7Z3T8 1539 aa23.13■■□□□ 1.29
PACRGL-210ENST00000504630 MBD5Q9P267 1494 aa23.12■■□□□ 1.29
PACRGL-210ENST00000504630 MLH3Q9UHC1 1453 aa23.11■■□□□ 1.29
PACRGL-210ENST00000504630 HECW2Q9P2P5 1572 aa23.11■■□□□ 1.29
PACRGL-210ENST00000504630 YEATS2Q9ULM3 1422 aa23.11■■□□□ 1.29
PACRGL-210ENST00000504630 FGD6Q6ZV73 1430 aa23.07■■□□□ 1.28
PACRGL-210ENST00000504630 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
PACRGL-210ENST00000504630 KIDINS220Q9ULH0 1771 aa23.06■■□□□ 1.28
PACRGL-210ENST00000504630 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
PACRGL-210ENST00000504630 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
PACRGL-210ENST00000504630 ATP10AO60312 1499 aa23.04■■□□□ 1.28
PACRGL-210ENST00000504630 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
PACRGL-210ENST00000504630 CCDC141Q6ZP82 1450 aa23.04■■□□□ 1.28
PACRGL-210ENST00000504630 INO80Q9ULG1 1556 aaPredicted RBP23.03■■□□□ 1.28
PACRGL-210ENST00000504630 DIP2CQ9Y2E4 1556 aa23.03■■□□□ 1.28
PACRGL-210ENST00000504630 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
PACRGL-210ENST00000504630 SPAG9O60271 1321 aaKnown RBP23.02■■□□□ 1.28
PACRGL-210ENST00000504630 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
PACRGL-210ENST00000504630 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
PACRGL-210ENST00000504630 SIGLEC1Q9BZZ2 1709 aa23■■□□□ 1.27
PACRGL-210ENST00000504630 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
PACRGL-210ENST00000504630 REREQ9P2R6 1566 aa22.99■■□□□ 1.27
PACRGL-210ENST00000504630 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
PACRGL-210ENST00000504630 MYT1LQ9UL68 1186 aa22.98■■□□□ 1.27
PACRGL-210ENST00000504630 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
PACRGL-210ENST00000504630 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
PACRGL-210ENST00000504630 BCORL1Q5H9F3 1711 aa22.93■■□□□ 1.26
PACRGL-210ENST00000504630 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
PACRGL-210ENST00000504630 ABCC5O15440 1437 aa22.91■■□□□ 1.26
PACRGL-210ENST00000504630 CROCC2H7BZ55 1655 aa22.91■■□□□ 1.26
PACRGL-210ENST00000504630 ARID4BQ4LE39 1312 aaPredicted RBP22.91■■□□□ 1.26
PACRGL-210ENST00000504630 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
PACRGL-210ENST00000504630 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
PACRGL-210ENST00000504630 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
PACRGL-210ENST00000504630 AGLP35573 1532 aa22.9■■□□□ 1.26
PACRGL-210ENST00000504630 SHANK2Q9UPX8 1470 aa22.9■■□□□ 1.26
PACRGL-210ENST00000504630 ADAMTSL3P82987 1691 aa22.9■■□□□ 1.26
PACRGL-210ENST00000504630 DAPK1P53355 1430 aa22.89■■□□□ 1.25
PACRGL-210ENST00000504630 PLXNC1O60486 1568 aa22.89■■□□□ 1.25
PACRGL-210ENST00000504630 A2MP01023 1474 aa22.87■■□□□ 1.25
PACRGL-210ENST00000504630 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
PACRGL-210ENST00000504630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.85■■□□□ 1.25
PACRGL-210ENST00000504630 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
PACRGL-210ENST00000504630 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.25
PACRGL-210ENST00000504630 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
PACRGL-210ENST00000504630 MLECQ14165 292 aa22.79■■□□□ 1.24
PACRGL-210ENST00000504630 FER1L4A9Z1Z3 1794 aa22.76■■□□□ 1.23
PACRGL-210ENST00000504630 ADGRL2O95490 1459 aa22.76■■□□□ 1.23
PACRGL-210ENST00000504630 PTPRKQ15262 1439 aa22.75■■□□□ 1.23
PACRGL-210ENST00000504630 DUOX2Q9NRD8 1548 aa22.75■■□□□ 1.23
PACRGL-210ENST00000504630 RIMS1Q86UR5 1692 aaKnown RBP22.74■■□□□ 1.23
PACRGL-210ENST00000504630 ANKRD30AQ9BXX3 1397 aa22.74■■□□□ 1.23
PACRGL-210ENST00000504630 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
PACRGL-210ENST00000504630 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
PACRGL-210ENST00000504630 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
PACRGL-210ENST00000504630 KIF15Q9NS87 1388 aa22.73■■□□□ 1.23
PACRGL-210ENST00000504630 PTPRMP28827 1452 aa22.73■■□□□ 1.23
PACRGL-210ENST00000504630 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
PACRGL-210ENST00000504630 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
PACRGL-210ENST00000504630 ERBINQ96RT1 1412 aa22.68■■□□□ 1.22
PACRGL-210ENST00000504630 KIF3BO15066 747 aa22.68■■□□□ 1.22
PACRGL-210ENST00000504630 ROCK1Q13464 1354 aa22.67■■□□□ 1.22
PACRGL-210ENST00000504630 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
PACRGL-210ENST00000504630 RNF17Q9BXT8 1623 aaKnown RBP22.67■■□□□ 1.22
PACRGL-210ENST00000504630 GGT6Q6P531 493 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms