RNA–Protein interactions for RNA: ENST00000504547.1

COPG1-203, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-203ENST00000504547 LRRIQ1Q96JM4 1722 aa12.07□□□□□ -0.48
COPG1-203ENST00000504547 YEATS2Q9ULM3 1422 aa12.07□□□□□ -0.48
COPG1-203ENST00000504547 SCAPERQ9BY12 1400 aa12.06□□□□□ -0.48
COPG1-203ENST00000504547 CDK11AQ9UQ88 783 aaPredicted RBP12.06□□□□□ -0.48
COPG1-203ENST00000504547 ARHGAP5Q13017 1502 aa12.06□□□□□ -0.48
COPG1-203ENST00000504547 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
COPG1-203ENST00000504547 CLIP1P30622 1438 aa12.05□□□□□ -0.48
COPG1-203ENST00000504547 ZMYM4Q5VZL5 1548 aa12.05□□□□□ -0.48
COPG1-203ENST00000504547 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
COPG1-203ENST00000504547 POGZQ7Z3K3 1410 aa12.04□□□□□ -0.48
COPG1-203ENST00000504547 FER1L4A9Z1Z3 1794 aa12.04□□□□□ -0.48
COPG1-203ENST00000504547 PLCH2O75038 1416 aa12.03□□□□□ -0.48
COPG1-203ENST00000504547 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
COPG1-203ENST00000504547 TROQ12816 1431 aaPredicted RBP12.02□□□□□ -0.49
COPG1-203ENST00000504547 MAGI2Q86UL8 1455 aa12□□□□□ -0.49
COPG1-203ENST00000504547 HSPA2P54652 639 aa11.99□□□□□ -0.49
COPG1-203ENST00000504547 LMTK3Q96Q04 1460 aa11.99□□□□□ -0.49
COPG1-203ENST00000504547 CDC42BPBQ9Y5S2 1711 aa11.98□□□□□ -0.49
COPG1-203ENST00000504547 CCDC18Q5T9S5 1454 aa11.98□□□□□ -0.49
COPG1-203ENST00000504547 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
COPG1-203ENST00000504547 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
COPG1-203ENST00000504547 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
COPG1-203ENST00000504547 AFAP1Q8N556 730 aa11.97□□□□□ -0.49
COPG1-203ENST00000504547 ATP10AO60312 1499 aa11.96□□□□□ -0.49
COPG1-203ENST00000504547 PHF23Q9BUL5 403 aaPredicted RBP11.96□□□□□ -0.49
COPG1-203ENST00000504547 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
COPG1-203ENST00000504547 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
COPG1-203ENST00000504547 CDC42BPAQ5VT25 1732 aa11.94□□□□□ -0.5
COPG1-203ENST00000504547 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
COPG1-203ENST00000504547 FYCO1Q9BQS8 1478 aa11.94□□□□□ -0.5
COPG1-203ENST00000504547 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
COPG1-203ENST00000504547 KDM5CP41229 1560 aa11.93□□□□□ -0.5
COPG1-203ENST00000504547 DIP2CQ9Y2E4 1556 aa11.93□□□□□ -0.5
COPG1-203ENST00000504547 CEBPAP49715 358 aaPredicted RBP11.93□□□□□ -0.5
COPG1-203ENST00000504547 ABCC1P33527 1531 aa11.92□□□□□ -0.5
COPG1-203ENST00000504547 ARHGEF12Q9NZN5 1544 aa11.92□□□□□ -0.5
COPG1-203ENST00000504547 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
COPG1-203ENST00000504547 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
COPG1-203ENST00000504547 TRAPPC8Q9Y2L5 1435 aa11.91□□□□□ -0.5
COPG1-203ENST00000504547 FBXO41Q8TF61 875 aa11.89□□□□□ -0.51
COPG1-203ENST00000504547 SYCP2Q9BX26 1530 aa11.89□□□□□ -0.51
COPG1-203ENST00000504547 SAMD9LQ8IVG5 1584 aa11.88□□□□□ -0.51
COPG1-203ENST00000504547 SUPT6HQ7KZ85 1726 aaKnown RBP11.87□□□□□ -0.51
COPG1-203ENST00000504547 MTUS2Q5JR59 1369 aa11.87□□□□□ -0.51
COPG1-203ENST00000504547 C3P01024 1663 aa11.87□□□□□ -0.51
COPG1-203ENST00000504547 KIDINS220Q9ULH0 1771 aa11.87□□□□□ -0.51
COPG1-203ENST00000504547 MLH3Q9UHC1 1453 aa11.86□□□□□ -0.51
COPG1-203ENST00000504547 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
COPG1-203ENST00000504547 CCNB3Q8WWL7 1395 aa11.85□□□□□ -0.51
COPG1-203ENST00000504547 HNRNPMP52272 730 aaKnown RBP eCLIP11.85□□□□□ -0.51
COPG1-203ENST00000504547 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
COPG1-203ENST00000504547 CFDP1Q9UEE9 299 aaPredicted RBP11.84□□□□□ -0.51
COPG1-203ENST00000504547 GPATCH8Q9UKJ3 1502 aaKnown RBP11.84□□□□□ -0.51
COPG1-203ENST00000504547 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
COPG1-203ENST00000504547 ATP7AQ04656 1500 aa11.82□□□□□ -0.52
COPG1-203ENST00000504547 CEP162Q5TB80 1403 aa11.81□□□□□ -0.52
COPG1-203ENST00000504547 CLTCQ00610 1675 aaKnown RBP11.81□□□□□ -0.52
COPG1-203ENST00000504547 AGLP35573 1532 aa11.81□□□□□ -0.52
COPG1-203ENST00000504547 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
COPG1-203ENST00000504547 TIAM1Q13009 1591 aa11.8□□□□□ -0.52
COPG1-203ENST00000504547 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
COPG1-203ENST00000504547 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
COPG1-203ENST00000504547 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
COPG1-203ENST00000504547 INO80Q9ULG1 1556 aaPredicted RBP11.79□□□□□ -0.52
COPG1-203ENST00000504547 ZNF644Q9H582 1327 aaPredicted RBP11.78□□□□□ -0.52
COPG1-203ENST00000504547 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.52
COPG1-203ENST00000504547 GGT6Q6P531 493 aa11.77□□□□□ -0.53
COPG1-203ENST00000504547 SETD1BQ9UPS6 1966 aaKnown RBP11.77□□□□□ -0.53
COPG1-203ENST00000504547 A2MP01023 1474 aa11.76□□□□□ -0.53
COPG1-203ENST00000504547 MROH2AA6NES4 1674 aa11.76□□□□□ -0.53
COPG1-203ENST00000504547 ADGBQ8N7X0 1667 aa11.76□□□□□ -0.53
COPG1-203ENST00000504547 DMRT2Q9Y5R5 561 aa11.75□□□□□ -0.53
COPG1-203ENST00000504547 KIAA1107Q9UPP5 1409 aa11.75□□□□□ -0.53
COPG1-203ENST00000504547 PLXNC1O60486 1568 aa11.74□□□□□ -0.53
COPG1-203ENST00000504547 ZMYM3Q14202 1370 aa11.73□□□□□ -0.53
COPG1-203ENST00000504547 CAMSAP1Q5T5Y3 1602 aa11.73□□□□□ -0.53
COPG1-203ENST00000504547 MYO3AQ8NEV4 1616 aa11.73□□□□□ -0.53
COPG1-203ENST00000504547 CAMSAP2Q08AD1 1489 aa11.72□□□□□ -0.53
COPG1-203ENST00000504547 NCOA2Q15596 1464 aa11.72□□□□□ -0.53
COPG1-203ENST00000504547 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.53
COPG1-203ENST00000504547 CCDC141Q6ZP82 1450 aa11.7□□□□□ -0.54
COPG1-203ENST00000504547 NPATQ14207 1427 aa11.69□□□□□ -0.54
COPG1-203ENST00000504547 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
COPG1-203ENST00000504547 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
COPG1-203ENST00000504547 CEP170BQ9Y4F5 1589 aaPredicted RBP11.69□□□□□ -0.54
COPG1-203ENST00000504547 MBD5Q9P267 1494 aa11.69□□□□□ -0.54
COPG1-203ENST00000504547 ZNF142P52746 1687 aaPredicted RBP11.68□□□□□ -0.54
COPG1-203ENST00000504547 KIF3BO15066 747 aa11.68□□□□□ -0.54
COPG1-203ENST00000504547 PTPRTO14522 1441 aa11.68□□□□□ -0.54
COPG1-203ENST00000504547 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
COPG1-203ENST00000504547 PTPRKQ15262 1439 aa11.66□□□□□ -0.54
COPG1-203ENST00000504547 RTEL1-TNFRSF6BF6WH68 1400 aa11.65□□□□□ -0.54
COPG1-203ENST00000504547 DHX29Q7Z478 1369 aaKnown RBP11.65□□□□□ -0.55
COPG1-203ENST00000504547 KDM5DQ9BY66 1539 aa11.65□□□□□ -0.55
COPG1-203ENST00000504547 LRRC9Q6ZRR7 1453 aa11.64□□□□□ -0.55
COPG1-203ENST00000504547 ZNF335Q9H4Z2 1342 aaPredicted RBP11.63□□□□□ -0.55
COPG1-203ENST00000504547 WASHC2CQ9Y4E1 1318 aa11.63□□□□□ -0.55
COPG1-203ENST00000504547 TSPY4P0CV99 314 aa11.63□□□□□ -0.55
COPG1-203ENST00000504547 TSPY10P0CW01 314 aa11.63□□□□□ -0.55
COPG1-203ENST00000504547 LTBP4Q8N2S1 1624 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms