RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 EMP3P54852 163 aa11.75□□□□□ -0.53
COL4A5-207ENST00000504541 NLRP6P59044 892 aa11.75□□□□□ -0.53
COL4A5-207ENST00000504541 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
COL4A5-207ENST00000504541 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
COL4A5-207ENST00000504541 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
COL4A5-207ENST00000504541 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
COL4A5-207ENST00000504541 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
COL4A5-207ENST00000504541 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
COL4A5-207ENST00000504541 MFRPQ9BY79 579 aa11.71□□□□□ -0.53
COL4A5-207ENST00000504541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.534e-6■■□□□ 13.5
COL4A5-207ENST00000504541 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
COL4A5-207ENST00000504541 FBXO22Q8NEZ5 403 aa11.64□□□□□ -0.55
COL4A5-207ENST00000504541 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
COL4A5-207ENST00000504541 PPP1R37O75864 691 aa11.59□□□□□ -0.55
COL4A5-207ENST00000504541 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
COL4A5-207ENST00000504541 G3V3G9 751 aa11.58□□□□□ -0.56
COL4A5-207ENST00000504541 DPY19L2Q6NUT2 758 aa11.56□□□□□ -0.56
COL4A5-207ENST00000504541 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
COL4A5-207ENST00000504541 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-207ENST00000504541 PDCD7Q8N8D1 485 aaKnown RBP11.53□□□□□ -0.56
COL4A5-207ENST00000504541 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.57
COL4A5-207ENST00000504541 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-207ENST00000504541 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-207ENST00000504541 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
COL4A5-207ENST00000504541 ZCCHC6Q5VYS8 1495 aaKnown RBP11.48□□□□□ -0.57
COL4A5-207ENST00000504541 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
COL4A5-207ENST00000504541 WDR70Q9NW82 654 aa11.44□□□□□ -0.58
COL4A5-207ENST00000504541 MICALL2Q8IY33 904 aa11.43□□□□□ -0.58
COL4A5-207ENST00000504541 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
COL4A5-207ENST00000504541 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
COL4A5-207ENST00000504541 PDE4AP27815 886 aa11.41□□□□□ -0.58
COL4A5-207ENST00000504541 MYO15BQ96JP2 1530 aa11.4□□□□□ -0.58
COL4A5-207ENST00000504541 HOXB3P14651 431 aaPredicted RBP11.4□□□□□ -0.58
COL4A5-207ENST00000504541 MYT1LQ9UL68 1186 aa11.39□□□□□ -0.59
COL4A5-207ENST00000504541 ABCC9O60706 1549 aa11.37□□□□□ -0.59
COL4A5-207ENST00000504541 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
COL4A5-207ENST00000504541 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
COL4A5-207ENST00000504541 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
COL4A5-207ENST00000504541 ERBB3P21860 1342 aa11.34□□□□□ -0.59
COL4A5-207ENST00000504541 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
COL4A5-207ENST00000504541 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
COL4A5-207ENST00000504541 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
COL4A5-207ENST00000504541 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
COL4A5-207ENST00000504541 C2orf72A6NCS6 295 aa11.27□□□□□ -0.61
COL4A5-207ENST00000504541 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
COL4A5-207ENST00000504541 NACADO15069 1562 aa11.27□□□□□ -0.61
COL4A5-207ENST00000504541 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
COL4A5-207ENST00000504541 E2F4Q16254 413 aa11.23□□□□□ -0.61
COL4A5-207ENST00000504541 PPP1R15BQ5SWA1 713 aa11.23□□□□□ -0.61
COL4A5-207ENST00000504541 DSG2Q14126 1118 aa11.22□□□□□ -0.61
COL4A5-207ENST00000504541 MFSD10Q14728 455 aa11.22□□□□□ -0.61
COL4A5-207ENST00000504541 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
COL4A5-207ENST00000504541 TMEM92Q6UXU6 159 aa11.22□□□□□ -0.61
COL4A5-207ENST00000504541 PTGER2P43116 358 aa11.21□□□□□ -0.61
COL4A5-207ENST00000504541 FOXK1P85037 733 aa11.21□□□□□ -0.61
COL4A5-207ENST00000504541 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
COL4A5-207ENST00000504541 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
COL4A5-207ENST00000504541 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
COL4A5-207ENST00000504541 KIF3CO14782 793 aa11.19□□□□□ -0.62
COL4A5-207ENST00000504541 RB1CC1Q8TDY2 1594 aa11.15□□□□□ -0.62
COL4A5-207ENST00000504541 NBR1Q14596 966 aa11.13□□□□□ -0.63
COL4A5-207ENST00000504541 KCNV2Q8TDN2 545 aa11.13□□□□□ -0.63
COL4A5-207ENST00000504541 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
COL4A5-207ENST00000504541 BCANQ96GW7 911 aa11.12□□□□□ -0.63
COL4A5-207ENST00000504541 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
COL4A5-207ENST00000504541 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
COL4A5-207ENST00000504541 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
COL4A5-207ENST00000504541 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL4A5-207ENST00000504541 TBC1D12O60347 775 aa11.08□□□□□ -0.64
COL4A5-207ENST00000504541 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
COL4A5-207ENST00000504541 ZSWIM6Q9HCJ5 1215 aa11.07□□□□□ -0.64
COL4A5-207ENST00000504541 PLA2G2EQ9NZK7 142 aa11.07□□□□□ -0.64
COL4A5-207ENST00000504541 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
COL4A5-207ENST00000504541 DPYSL4O14531 572 aa11.04□□□□□ -0.64
COL4A5-207ENST00000504541 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
COL4A5-207ENST00000504541 SLC34A2O95436 690 aa11.01□□□□□ -0.65
COL4A5-207ENST00000504541 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
COL4A5-207ENST00000504541 PTCD2Q8WV60 388 aaKnown RBP11□□□□□ -0.65
COL4A5-207ENST00000504541 ARIH1Q9Y4X5 557 aaPredicted RBP11□□□□□ -0.65
COL4A5-207ENST00000504541 SPDYE16A6NNV3 312 aaPredicted RBP10.99□□□□□ -0.65
COL4A5-207ENST00000504541 LSM11P83369 360 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL4A5-207ENST00000504541 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
COL4A5-207ENST00000504541 PCDHGA4Q9Y5G9 962 aa10.97□□□□□ -0.65
COL4A5-207ENST00000504541 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
COL4A5-207ENST00000504541 SEMA3EO15041 775 aa10.95□□□□□ -0.66
COL4A5-207ENST00000504541 EVI5O60447 810 aa10.95□□□□□ -0.66
COL4A5-207ENST00000504541 ARSIQ5FYB1 569 aa10.95□□□□□ -0.66
COL4A5-207ENST00000504541 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
COL4A5-207ENST00000504541 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
COL4A5-207ENST00000504541 PDIA6Q15084 440 aa10.92□□□□□ -0.66
COL4A5-207ENST00000504541 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
COL4A5-207ENST00000504541 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL4A5-207ENST00000504541 GRXCR2A6NFK2 248 aa10.89□□□□□ -0.67
COL4A5-207ENST00000504541 NUDT7P0C024 238 aa10.89□□□□□ -0.67
COL4A5-207ENST00000504541 TESPA1A2RU30 521 aaPredicted RBP10.87□□□□□ -0.67
COL4A5-207ENST00000504541 DDX12PQ92771 950 aa10.87□□□□□ -0.67
COL4A5-207ENST00000504541 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
COL4A5-207ENST00000504541 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
COL4A5-207ENST00000504541 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
COL4A5-207ENST00000504541 PBX2P40425 430 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms