RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 MAGI2Q86UL8 1455 aa35.22■■■■□ 3.23
RNF4-205ENST00000504224 PLPPR3Q6T4P5 718 aa35.21■■■■□ 3.23
RNF4-205ENST00000504224 TROQ12816 1431 aaPredicted RBP35.2■■■■□ 3.23
RNF4-205ENST00000504224 RIMS1Q86UR5 1692 aaKnown RBP35.2■■■■□ 3.23
RNF4-205ENST00000504224 CLIP1P30622 1438 aa35.19■■■■□ 3.22
RNF4-205ENST00000504224 KIF14Q15058 1648 aa35.19■■■■□ 3.22
RNF4-205ENST00000504224 MYO5CQ9NQX4 1742 aa35.19■■■■□ 3.22
RNF4-205ENST00000504224 MLECQ14165 292 aa35.18■■■■□ 3.22
RNF4-205ENST00000504224 ARHGAP5Q13017 1502 aa35.12■■■■□ 3.21
RNF4-205ENST00000504224 PCF11O94913 1555 aaKnown RBP35.12■■■■□ 3.21
RNF4-205ENST00000504224 SIGLEC1Q9BZZ2 1709 aa35.11■■■■□ 3.21
RNF4-205ENST00000504224 LRRIQ1Q96JM4 1722 aa35.09■■■■□ 3.21
RNF4-205ENST00000504224 MYT1LQ9UL68 1186 aa35.07■■■■□ 3.2
RNF4-205ENST00000504224 ATP10AO60312 1499 aa35.07■■■■□ 3.2
RNF4-205ENST00000504224 LMTK3Q96Q04 1460 aa35.07■■■■□ 3.2
RNF4-205ENST00000504224 CASKIN1Q8WXD9 1431 aa35.06■■■■□ 3.2
RNF4-205ENST00000504224 AFAP1Q8N556 730 aa35.04■■■■□ 3.2
RNF4-205ENST00000504224 C9orf84Q5VXU9 1444 aa35.04■■■■□ 3.2
RNF4-205ENST00000504224 ZNF518AQ6AHZ1 1483 aa35.03■■■■□ 3.2
RNF4-205ENST00000504224 CCDC18Q5T9S5 1454 aa35.03■■■■□ 3.2
RNF4-205ENST00000504224 HSPA2P54652 639 aa34.98■■■■□ 3.19
RNF4-205ENST00000504224 FER1L4A9Z1Z3 1794 aa34.97■■■■□ 3.19
RNF4-205ENST00000504224 KDM5CP41229 1560 aa34.93■■■■□ 3.18
RNF4-205ENST00000504224 CDC42BPBQ9Y5S2 1711 aa34.92■■■■□ 3.18
RNF4-205ENST00000504224 ARHGEF12Q9NZN5 1544 aa34.91■■■■□ 3.18
RNF4-205ENST00000504224 FYCO1Q9BQS8 1478 aa34.9■■■■□ 3.18
RNF4-205ENST00000504224 PREX2Q70Z35 1606 aa34.88■■■■□ 3.17
RNF4-205ENST00000504224 FBXO41Q8TF61 875 aa34.88■■■■□ 3.17
RNF4-205ENST00000504224 TRAPPC8Q9Y2L5 1435 aa34.85■■■■□ 3.17
RNF4-205ENST00000504224 CEBPAP49715 358 aaPredicted RBP34.84■■■■□ 3.17
RNF4-205ENST00000504224 DIP2CQ9Y2E4 1556 aa34.83■■■■□ 3.17
RNF4-205ENST00000504224 ABCC1P33527 1531 aa34.83■■■■□ 3.17
RNF4-205ENST00000504224 ZNF777Q9ULD5 760 aaPredicted RBP34.82■■■■□ 3.16
RNF4-205ENST00000504224 MLH3Q9UHC1 1453 aa34.82■■■■□ 3.16
RNF4-205ENST00000504224 ABCA6Q8N139 1617 aa34.77■■■■□ 3.16
RNF4-205ENST00000504224 ITSN2Q9NZM3 1697 aa34.77■■■■□ 3.16
RNF4-205ENST00000504224 CDC42BPAQ5VT25 1732 aa34.76■■■■□ 3.16
RNF4-205ENST00000504224 REREQ9P2R6 1566 aa34.74■■■■□ 3.15
RNF4-205ENST00000504224 ESF1Q9H501 851 aaKnown RBP34.73■■■■□ 3.15
RNF4-205ENST00000504224 GPATCH8Q9UKJ3 1502 aaKnown RBP34.69■■■■□ 3.14
RNF4-205ENST00000504224 PREX1Q8TCU6 1659 aa34.68■■■■□ 3.14
RNF4-205ENST00000504224 AGLP35573 1532 aa34.66■■■■□ 3.14
RNF4-205ENST00000504224 HNRNPMP52272 730 aaKnown RBP eCLIP34.66■■■■□ 3.14
RNF4-205ENST00000504224 SAMD9LQ8IVG5 1584 aa34.66■■■■□ 3.14
RNF4-205ENST00000504224 MTUS2Q5JR59 1369 aa34.65■■■■□ 3.14
RNF4-205ENST00000504224 KIDINS220Q9ULH0 1771 aa34.65■■■■□ 3.14
RNF4-205ENST00000504224 CFDP1Q9UEE9 299 aaPredicted RBP34.65■■■■□ 3.14
RNF4-205ENST00000504224 SYCP2Q9BX26 1530 aa34.64■■■■□ 3.14
RNF4-205ENST00000504224 UHRF1BP1Q6BDS2 1440 aa34.64■■■■□ 3.14
RNF4-205ENST00000504224 CCNB3Q8WWL7 1395 aa34.63■■■■□ 3.13
RNF4-205ENST00000504224 SPAG9O60271 1321 aaKnown RBP34.63■■■■□ 3.13
RNF4-205ENST00000504224 C3P01024 1663 aa34.55■■■■□ 3.12
RNF4-205ENST00000504224 PLEKHH2Q8IVE3 1493 aa34.55■■■■□ 3.12
RNF4-205ENST00000504224 CERKQ8TCT0 537 aa34.54■■■■□ 3.12
RNF4-205ENST00000504224 KIAA1107Q9UPP5 1409 aa34.54■■■■□ 3.12
RNF4-205ENST00000504224 CNTLNQ9NXG0 1405 aa34.52■■■■□ 3.12
RNF4-205ENST00000504224 DMRT2Q9Y5R5 561 aa34.51■■■■□ 3.12
RNF4-205ENST00000504224 SETD1BQ9UPS6 1966 aaKnown RBP34.5■■■■□ 3.11
RNF4-205ENST00000504224 CEP162Q5TB80 1403 aa34.49■■■■□ 3.11
RNF4-205ENST00000504224 ATP7AQ04656 1500 aa34.49■■■■□ 3.11
RNF4-205ENST00000504224 EHBP1L1Q8N3D4 1523 aa34.45■■■■□ 3.1
RNF4-205ENST00000504224 SUPT6HQ7KZ85 1726 aaKnown RBP34.44■■■■□ 3.1
RNF4-205ENST00000504224 ZNF644Q9H582 1327 aaPredicted RBP34.44■■■■□ 3.1
RNF4-205ENST00000504224 STRCQ7RTU9 1775 aa34.43■■■■□ 3.1
RNF4-205ENST00000504224 TIAM1Q13009 1591 aa34.42■■■■□ 3.1
RNF4-205ENST00000504224 A2MP01023 1474 aa34.42■■■■□ 3.1
RNF4-205ENST00000504224 INO80Q9ULG1 1556 aaPredicted RBP34.41■■■■□ 3.1
RNF4-205ENST00000504224 ZMYM3Q14202 1370 aa34.39■■■■□ 3.1
RNF4-205ENST00000504224 GGT6Q6P531 493 aa34.38■■■■□ 3.09
RNF4-205ENST00000504224 PLXNC1O60486 1568 aa34.35■■■■□ 3.09
RNF4-205ENST00000504224 MROH2AA6NES4 1674 aa34.34■■■■□ 3.09
RNF4-205ENST00000504224 NPATQ14207 1427 aa34.33■■■■□ 3.09
RNF4-205ENST00000504224 MBD5Q9P267 1494 aa34.31■■■■□ 3.08
RNF4-205ENST00000504224 PTPRTO14522 1441 aa34.3■■■■□ 3.08
RNF4-205ENST00000504224 CLTCQ00610 1675 aaKnown RBP34.29■■■■□ 3.08
RNF4-205ENST00000504224 ADGBQ8N7X0 1667 aa34.26■■■■□ 3.08
RNF4-205ENST00000504224 NCOA1Q15788 1441 aa34.26■■■■□ 3.07
RNF4-205ENST00000504224 NCOA2Q15596 1464 aa34.26■■■■□ 3.07
RNF4-205ENST00000504224 RTEL1-TNFRSF6BF6WH68 1400 aa34.23■■■■□ 3.07
RNF4-205ENST00000504224 PPP6R1Q9UPN7 881 aa34.21■■■■□ 3.07
RNF4-205ENST00000504224 CAMSAP1Q5T5Y3 1602 aa34.21■■■■□ 3.07
RNF4-205ENST00000504224 LOC105371045A0A1W2PR82 267 aa34.2■■■■□ 3.07
RNF4-205ENST00000504224 CAMSAP2Q08AD1 1489 aa34.2■■■■□ 3.06
RNF4-205ENST00000504224 PTPRKQ15262 1439 aa34.19■■■■□ 3.06
RNF4-205ENST00000504224 DHX29Q7Z478 1369 aaKnown RBP34.18■■■■□ 3.06
RNF4-205ENST00000504224 CCDC141Q6ZP82 1450 aa34.18■■■■□ 3.06
RNF4-205ENST00000504224 NCKAP5LQ9HCH0 1330 aa34.16■■■■□ 3.06
RNF4-205ENST00000504224 KIF3BO15066 747 aa34.15■■■■□ 3.06
RNF4-205ENST00000504224 RSPH4AQ5TD94 716 aa34.14■■■■□ 3.06
RNF4-205ENST00000504224 MYO3AQ8NEV4 1616 aa34.13■■■■□ 3.05
RNF4-205ENST00000504224 VPS8Q8N3P4 1428 aa34.12■■■■□ 3.05
RNF4-205ENST00000504224 CEP170BQ9Y4F5 1589 aaPredicted RBP34.09■■■■□ 3.05
RNF4-205ENST00000504224 ZNF142P52746 1687 aaPredicted RBP34.07■■■■□ 3.04
RNF4-205ENST00000504224 TSPY4P0CV99 314 aa34.07■■■■□ 3.04
RNF4-205ENST00000504224 TSPY10P0CW01 314 aa34.07■■■■□ 3.04
RNF4-205ENST00000504224 LTBP4Q8N2S1 1624 aa34.07■■■■□ 3.04
RNF4-205ENST00000504224 LRRC9Q6ZRR7 1453 aa34.07■■■■□ 3.04
RNF4-205ENST00000504224 PKD2Q13563 968 aa34.05■■■■□ 3.04
RNF4-205ENST00000504224 PLA2R1Q13018 1463 aa34.03■■■■□ 3.04
RNF4-205ENST00000504224 WASHC2CQ9Y4E1 1318 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms