RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 KIAA0586Q9BVV6 1533 aa20.74■□□□□ 0.91
SNF8-203ENST00000504000 CCDC7Q96M83 1385 aa20.74■□□□□ 0.91
SNF8-203ENST00000504000 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
SNF8-203ENST00000504000 TEX14Q8IWB6 1497 aa20.73■□□□□ 0.91
SNF8-203ENST00000504000 ABCC5O15440 1437 aa20.72■□□□□ 0.91
SNF8-203ENST00000504000 POLR1AO95602 1720 aaPredicted RBP20.72■□□□□ 0.91
SNF8-203ENST00000504000 SPATA31E1Q6ZUB1 1445 aa20.72■□□□□ 0.91
SNF8-203ENST00000504000 KIAA0556O60303 1618 aa20.71■□□□□ 0.91
SNF8-203ENST00000504000 DISP1Q96F81 1524 aa20.69■□□□□ 0.9
SNF8-203ENST00000504000 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
SNF8-203ENST00000504000 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
SNF8-203ENST00000504000 NUP153P49790 1475 aaKnown RBP20.67■□□□□ 0.9
SNF8-203ENST00000504000 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
SNF8-203ENST00000504000 RAPGEF6Q8TEU7 1601 aa20.66■□□□□ 0.9
SNF8-203ENST00000504000 ZBED9Q6R2W3 1325 aa20.63■□□□□ 0.89
SNF8-203ENST00000504000 C11orf95C9JLR9 678 aaPredicted RBP20.62■□□□□ 0.89
SNF8-203ENST00000504000 NBPF8Q3BBV2 869 aa20.62■□□□□ 0.89
SNF8-203ENST00000504000 ADGRL2O95490 1459 aa20.61■□□□□ 0.89
SNF8-203ENST00000504000 FANCIQ9NVI1 1328 aa20.61■□□□□ 0.89
SNF8-203ENST00000504000 ITSN2Q9NZM3 1697 aa20.6■□□□□ 0.89
SNF8-203ENST00000504000 TROQ12816 1431 aaPredicted RBP20.6■□□□□ 0.89
SNF8-203ENST00000504000 ADGBQ8N7X0 1667 aa20.59■□□□□ 0.89
SNF8-203ENST00000504000 PZPP20742 1482 aa20.59■□□□□ 0.89
SNF8-203ENST00000504000 MBD5Q9P267 1494 aa20.59■□□□□ 0.89
SNF8-203ENST00000504000 SLC4A1APQ9BWU0 796 aaKnown RBP20.59■□□□□ 0.89
SNF8-203ENST00000504000 ARID4BQ4LE39 1312 aaPredicted RBP20.59■□□□□ 0.89
SNF8-203ENST00000504000 PPP4R2Q9NY27 417 aa20.58■□□□□ 0.89
SNF8-203ENST00000504000 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
SNF8-203ENST00000504000 GRIN2AQ12879 1464 aa20.58■□□□□ 0.88
SNF8-203ENST00000504000 ADCY10Q96PN6 1610 aa20.58■□□□□ 0.88
SNF8-203ENST00000504000 KIF7Q2M1P5 1343 aa20.57■□□□□ 0.88
SNF8-203ENST00000504000 FOXD1Q16676 465 aa20.57■□□□□ 0.88
SNF8-203ENST00000504000 CCDC184Q52MB2 194 aa20.55■□□□□ 0.88
SNF8-203ENST00000504000 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
SNF8-203ENST00000504000 CAMSAP2Q08AD1 1489 aa20.55■□□□□ 0.88
SNF8-203ENST00000504000 KIAA1107Q9UPP5 1409 aa20.54■□□□□ 0.88
SNF8-203ENST00000504000 ZNF608Q9ULD9 1512 aaPredicted RBP20.54■□□□□ 0.88
SNF8-203ENST00000504000 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
SNF8-203ENST00000504000 GPATCH8Q9UKJ3 1502 aaKnown RBP20.53■□□□□ 0.88
SNF8-203ENST00000504000 CROCC2H7BZ55 1655 aa20.52■□□□□ 0.88
SNF8-203ENST00000504000 KIF14Q15058 1648 aa20.49■□□□□ 0.87
SNF8-203ENST00000504000 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
SNF8-203ENST00000504000 CFDP1Q9UEE9 299 aaPredicted RBP20.49■□□□□ 0.87
SNF8-203ENST00000504000 UHRF1BP1Q6BDS2 1440 aa20.49■□□□□ 0.87
SNF8-203ENST00000504000 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
SNF8-203ENST00000504000 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
SNF8-203ENST00000504000 ANKRD30AQ9BXX3 1397 aa20.47■□□□□ 0.87
SNF8-203ENST00000504000 FAM9BQ8IZU0 186 aa20.47■□□□□ 0.87
SNF8-203ENST00000504000 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
SNF8-203ENST00000504000 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
SNF8-203ENST00000504000 SHANK2Q9UPX8 1470 aa20.46■□□□□ 0.87
SNF8-203ENST00000504000 ROCK2O75116 1388 aaKnown RBP20.45■□□□□ 0.87
SNF8-203ENST00000504000 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
SNF8-203ENST00000504000 KDM5CP41229 1560 aa20.44■□□□□ 0.86
SNF8-203ENST00000504000 ARHGEF12Q9NZN5 1544 aa20.44■□□□□ 0.86
SNF8-203ENST00000504000 USP47Q96K76 1375 aa20.44■□□□□ 0.86
SNF8-203ENST00000504000 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
SNF8-203ENST00000504000 KDM5DQ9BY66 1539 aa20.43■□□□□ 0.86
SNF8-203ENST00000504000 RALGAPBQ86X10 1494 aa20.42■□□□□ 0.86
SNF8-203ENST00000504000 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
SNF8-203ENST00000504000 MSH5O43196 834 aa20.41■□□□□ 0.86
SNF8-203ENST00000504000 CARMIL2Q6F5E8 1435 aa20.41■□□□□ 0.86
SNF8-203ENST00000504000 ANKRD50Q9ULJ7 1429 aa20.41■□□□□ 0.86
SNF8-203ENST00000504000 BCORL1Q5H9F3 1711 aa20.41■□□□□ 0.86
SNF8-203ENST00000504000 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
SNF8-203ENST00000504000 PLB1Q6P1J6 1458 aa20.4■□□□□ 0.86
SNF8-203ENST00000504000 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
SNF8-203ENST00000504000 KTN1Q86UP2 1357 aaKnown RBP20.39■□□□□ 0.85
SNF8-203ENST00000504000 PKD2Q13563 968 aa20.38■□□□□ 0.85
SNF8-203ENST00000504000 NUP160Q12769 1436 aa20.37■□□□□ 0.85
SNF8-203ENST00000504000 ABCC10Q5T3U5 1492 aa20.36■□□□□ 0.85
SNF8-203ENST00000504000 PTPRGP23470 1445 aa20.35■□□□□ 0.85
SNF8-203ENST00000504000 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
SNF8-203ENST00000504000 ABCA8O94911 1581 aa20.33■□□□□ 0.85
SNF8-203ENST00000504000 CDC42BPAQ5VT25 1732 aa20.33■□□□□ 0.85
SNF8-203ENST00000504000 C9orf84Q5VXU9 1444 aa20.32■□□□□ 0.84
SNF8-203ENST00000504000 ARHGEF5Q12774 1597 aa20.31■□□□□ 0.84
SNF8-203ENST00000504000 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
SNF8-203ENST00000504000 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
SNF8-203ENST00000504000 PNISRQ8TF01 805 aaKnown RBP20.3■□□□□ 0.84
SNF8-203ENST00000504000 KIF15Q9NS87 1388 aa20.3■□□□□ 0.84
SNF8-203ENST00000504000 NUP155O75694 1391 aa20.29■□□□□ 0.84
SNF8-203ENST00000504000 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
SNF8-203ENST00000504000 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
SNF8-203ENST00000504000 MYT1LQ9UL68 1186 aa20.28■□□□□ 0.84
SNF8-203ENST00000504000 LRPPRCP42704 1394 aaKnown RBP20.27■□□□□ 0.84
SNF8-203ENST00000504000 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
SNF8-203ENST00000504000 BRD4O60885 1362 aaPredicted RBP20.27■□□□□ 0.83
SNF8-203ENST00000504000 ATP10BO94823 1461 aa20.26■□□□□ 0.83
SNF8-203ENST00000504000 RALBP1Q15311 655 aa20.25■□□□□ 0.83
SNF8-203ENST00000504000 TSPY4P0CV99 314 aa20.24■□□□□ 0.83
SNF8-203ENST00000504000 TSPY10P0CW01 314 aa20.24■□□□□ 0.83
SNF8-203ENST00000504000 CARD11Q9BXL7 1154 aa20.24■□□□□ 0.83
SNF8-203ENST00000504000 E9PCH4 1651 aa20.24■□□□□ 0.83
SNF8-203ENST00000504000 ERICH6Q7L0X2 663 aa20.24■□□□□ 0.83
SNF8-203ENST00000504000 RSPH4AQ5TD94 716 aa20.23■□□□□ 0.83
SNF8-203ENST00000504000 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
SNF8-203ENST00000504000 MYBBP1AQ9BQG0 1328 aaKnown RBP20.21■□□□□ 0.83
SNF8-203ENST00000504000 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
SNF8-203ENST00000504000 INSRP06213 1382 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms