RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 LMTK3Q96Q04 1460 aa23.5■■□□□ 1.35
POLR2J3-207ENST00000503564 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
POLR2J3-207ENST00000503564 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
POLR2J3-207ENST00000503564 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
POLR2J3-207ENST00000503564 SCAPERQ9BY12 1400 aa23.48■■□□□ 1.35
POLR2J3-207ENST00000503564 FER1L4A9Z1Z3 1794 aa23.45■■□□□ 1.34
POLR2J3-207ENST00000503564 TROQ12816 1431 aaPredicted RBP23.43■■□□□ 1.34
POLR2J3-207ENST00000503564 ATP1B4Q9UN42 357 aaPredicted RBP23.4■■□□□ 1.34
POLR2J3-207ENST00000503564 KDM5CP41229 1560 aa23.39■■□□□ 1.33
POLR2J3-207ENST00000503564 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
POLR2J3-207ENST00000503564 C9orf84Q5VXU9 1444 aa23.38■■□□□ 1.33
POLR2J3-207ENST00000503564 ARHGEF12Q9NZN5 1544 aa23.38■■□□□ 1.33
POLR2J3-207ENST00000503564 ATP10AO60312 1499 aa23.37■■□□□ 1.33
POLR2J3-207ENST00000503564 EFCAB2Q5VUJ9 269 aa23.37■■□□□ 1.33
POLR2J3-207ENST00000503564 ARHGAP5Q13017 1502 aa23.37■■□□□ 1.33
POLR2J3-207ENST00000503564 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
POLR2J3-207ENST00000503564 CLIP1P30622 1438 aa23.36■■□□□ 1.33
POLR2J3-207ENST00000503564 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
POLR2J3-207ENST00000503564 PREX2Q70Z35 1606 aa23.33■■□□□ 1.33
POLR2J3-207ENST00000503564 CASKIN1Q8WXD9 1431 aa23.32■■□□□ 1.32
POLR2J3-207ENST00000503564 MLECQ14165 292 aa23.31■■□□□ 1.32
POLR2J3-207ENST00000503564 FBXO41Q8TF61 875 aa23.31■■□□□ 1.32
POLR2J3-207ENST00000503564 DIP2CQ9Y2E4 1556 aa23.31■■□□□ 1.32
POLR2J3-207ENST00000503564 CCDC18Q5T9S5 1454 aa23.3■■□□□ 1.32
POLR2J3-207ENST00000503564 REREQ9P2R6 1566 aa23.29■■□□□ 1.32
POLR2J3-207ENST00000503564 ABCC1P33527 1531 aa23.28■■□□□ 1.32
POLR2J3-207ENST00000503564 HSPA2P54652 639 aa23.28■■□□□ 1.32
POLR2J3-207ENST00000503564 ABCA6Q8N139 1617 aa23.28■■□□□ 1.32
POLR2J3-207ENST00000503564 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
POLR2J3-207ENST00000503564 ITSN2Q9NZM3 1697 aa23.27■■□□□ 1.32
POLR2J3-207ENST00000503564 PREX1Q8TCU6 1659 aa23.26■■□□□ 1.31
POLR2J3-207ENST00000503564 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
POLR2J3-207ENST00000503564 AFAP1Q8N556 730 aa23.26■■□□□ 1.31
POLR2J3-207ENST00000503564 MLH3Q9UHC1 1453 aa23.24■■□□□ 1.31
POLR2J3-207ENST00000503564 FYCO1Q9BQS8 1478 aa23.23■■□□□ 1.31
POLR2J3-207ENST00000503564 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
POLR2J3-207ENST00000503564 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
POLR2J3-207ENST00000503564 AGLP35573 1532 aa23.18■■□□□ 1.3
POLR2J3-207ENST00000503564 C3P01024 1663 aa23.16■■□□□ 1.3
POLR2J3-207ENST00000503564 CEBPAP49715 358 aaPredicted RBP23.15■■□□□ 1.3
POLR2J3-207ENST00000503564 SAMD9LQ8IVG5 1584 aa23.14■■□□□ 1.3
POLR2J3-207ENST00000503564 SETD1BQ9UPS6 1966 aaKnown RBP23.13■■□□□ 1.29
POLR2J3-207ENST00000503564 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
POLR2J3-207ENST00000503564 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
POLR2J3-207ENST00000503564 SYCP2Q9BX26 1530 aa23.1■■□□□ 1.29
POLR2J3-207ENST00000503564 GPATCH8Q9UKJ3 1502 aaKnown RBP23.09■■□□□ 1.29
POLR2J3-207ENST00000503564 UHRF1BP1Q6BDS2 1440 aa23.08■■□□□ 1.29
POLR2J3-207ENST00000503564 INO80Q9ULG1 1556 aaPredicted RBP23.04■■□□□ 1.28
POLR2J3-207ENST00000503564 CERKQ8TCT0 537 aa23.03■■□□□ 1.28
POLR2J3-207ENST00000503564 MROH2AA6NES4 1674 aa23.02■■□□□ 1.28
POLR2J3-207ENST00000503564 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
POLR2J3-207ENST00000503564 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
POLR2J3-207ENST00000503564 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
POLR2J3-207ENST00000503564 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
POLR2J3-207ENST00000503564 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
POLR2J3-207ENST00000503564 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
POLR2J3-207ENST00000503564 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
POLR2J3-207ENST00000503564 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
POLR2J3-207ENST00000503564 SPAG9O60271 1321 aaKnown RBP22.96■■□□□ 1.27
POLR2J3-207ENST00000503564 HNRNPMP52272 730 aaKnown RBP eCLIP22.95■■□□□ 1.26
POLR2J3-207ENST00000503564 CCNB3Q8WWL7 1395 aa22.95■■□□□ 1.26
POLR2J3-207ENST00000503564 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
POLR2J3-207ENST00000503564 EHBP1L1Q8N3D4 1523 aa22.94■■□□□ 1.26
POLR2J3-207ENST00000503564 PTPRTO14522 1441 aa22.93■■□□□ 1.26
POLR2J3-207ENST00000503564 NPATQ14207 1427 aa22.93■■□□□ 1.26
POLR2J3-207ENST00000503564 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
POLR2J3-207ENST00000503564 CFDP1Q9UEE9 299 aaPredicted RBP22.93■■□□□ 1.26
POLR2J3-207ENST00000503564 DMRT2Q9Y5R5 561 aa22.93■■□□□ 1.26
POLR2J3-207ENST00000503564 CLTCQ00610 1675 aaKnown RBP22.93■■□□□ 1.26
POLR2J3-207ENST00000503564 A2MP01023 1474 aa22.92■■□□□ 1.26
POLR2J3-207ENST00000503564 ADGBQ8N7X0 1667 aa22.91■■□□□ 1.26
POLR2J3-207ENST00000503564 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
POLR2J3-207ENST00000503564 ZNF142P52746 1687 aaPredicted RBP22.88■■□□□ 1.25
POLR2J3-207ENST00000503564 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
POLR2J3-207ENST00000503564 ZMYM3Q14202 1370 aa22.88■■□□□ 1.25
POLR2J3-207ENST00000503564 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
POLR2J3-207ENST00000503564 CEP162Q5TB80 1403 aa22.87■■□□□ 1.25
POLR2J3-207ENST00000503564 LTBP4Q8N2S1 1624 aa22.86■■□□□ 1.25
POLR2J3-207ENST00000503564 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
POLR2J3-207ENST00000503564 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.25
POLR2J3-207ENST00000503564 PTPRKQ15262 1439 aa22.82■■□□□ 1.24
POLR2J3-207ENST00000503564 CEP170BQ9Y4F5 1589 aaPredicted RBP22.8■■□□□ 1.24
POLR2J3-207ENST00000503564 RTEL1-TNFRSF6BF6WH68 1400 aa22.8■■□□□ 1.24
POLR2J3-207ENST00000503564 NCOA2Q15596 1464 aa22.78■■□□□ 1.24
POLR2J3-207ENST00000503564 PLA2R1Q13018 1463 aa22.77■■□□□ 1.24
POLR2J3-207ENST00000503564 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.24
POLR2J3-207ENST00000503564 CAMSAP2Q08AD1 1489 aa22.75■■□□□ 1.23
POLR2J3-207ENST00000503564 CCDC141Q6ZP82 1450 aa22.75■■□□□ 1.23
POLR2J3-207ENST00000503564 GGT6Q6P531 493 aa22.75■■□□□ 1.23
POLR2J3-207ENST00000503564 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
POLR2J3-207ENST00000503564 TCOF1Q13428 1488 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-207ENST00000503564 DHX29Q7Z478 1369 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-207ENST00000503564 FAM135AQ9P2D6 1515 aa22.71■■□□□ 1.23
POLR2J3-207ENST00000503564 ARHGEF5Q12774 1597 aa22.7■■□□□ 1.22
POLR2J3-207ENST00000503564 NCKAP5LQ9HCH0 1330 aa22.69■■□□□ 1.22
POLR2J3-207ENST00000503564 DNMT1P26358 1616 aaKnown RBP22.68■■□□□ 1.22
POLR2J3-207ENST00000503564 KDM5DQ9BY66 1539 aa22.68■■□□□ 1.22
POLR2J3-207ENST00000503564 A2ML1A8K2U0 1454 aa22.68■■□□□ 1.22
POLR2J3-207ENST00000503564 PKD2Q13563 968 aa22.66■■□□□ 1.22
POLR2J3-207ENST00000503564 PZPP20742 1482 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms