RNA–Protein interactions for RNA: ENST00000503498.1

EFCAB12-202, Transcript of EF-hand calcium binding domain 12, humanhuman

TSL 2

Gene EFCAB12, Length 5,607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB12-202ENST00000503498 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
EFCAB12-202ENST00000503498 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
EFCAB12-202ENST00000503498 DYDC1Q8WWB3 177 aa13.74□□□□□ -0.21
EFCAB12-202ENST00000503498 TCERG1O14776 1098 aaKnown RBP13.74□□□□□ -0.21
EFCAB12-202ENST00000503498 ANO8Q9HCE9 1232 aaPredicted RBP13.74□□□□□ -0.21
EFCAB12-202ENST00000503498 OS9Q13438 667 aaPredicted RBP13.73□□□□□ -0.21
EFCAB12-202ENST00000503498 RUFY1Q96T51 708 aa13.73□□□□□ -0.21
EFCAB12-202ENST00000503498 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
EFCAB12-202ENST00000503498 ZNF592Q92610 1267 aa13.72□□□□□ -0.21
EFCAB12-202ENST00000503498 NEXNQ0ZGT2 675 aa13.72□□□□□ -0.21
EFCAB12-202ENST00000503498 SKOR2Q2VWA4 1001 aaPredicted RBP13.72□□□□□ -0.21
EFCAB12-202ENST00000503498 USP8P40818 1118 aa13.71□□□□□ -0.21
EFCAB12-202ENST00000503498 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
EFCAB12-202ENST00000503498 CFAP53Q96M91 514 aa13.71□□□□□ -0.21
EFCAB12-202ENST00000503498 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
EFCAB12-202ENST00000503498 DEF6Q9H4E7 631 aa13.7□□□□□ -0.22
EFCAB12-202ENST00000503498 ZRSR2Q15696 482 aaKnown RBP13.69□□□□□ -0.22
EFCAB12-202ENST00000503498 KIF3AQ9Y496 699 aa13.69□□□□□ -0.22
EFCAB12-202ENST00000503498 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
EFCAB12-202ENST00000503498 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
EFCAB12-202ENST00000503498 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
EFCAB12-202ENST00000503498 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
EFCAB12-202ENST00000503498 TPM1P09493 284 aa13.66□□□□□ -0.22
EFCAB12-202ENST00000503498 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
EFCAB12-202ENST00000503498 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
EFCAB12-202ENST00000503498 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
EFCAB12-202ENST00000503498 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
EFCAB12-202ENST00000503498 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
EFCAB12-202ENST00000503498 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
EFCAB12-202ENST00000503498 GIMAP7Q8NHV1 300 aa13.65□□□□□ -0.23
EFCAB12-202ENST00000503498 ERCC4Q92889 916 aaPredicted RBP13.64□□□□□ -0.23
EFCAB12-202ENST00000503498 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
EFCAB12-202ENST00000503498 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
EFCAB12-202ENST00000503498 MNS1Q8NEH6 495 aa13.63□□□□□ -0.23
EFCAB12-202ENST00000503498 CREBRFQ8IUR6 639 aa13.62□□□□□ -0.23
EFCAB12-202ENST00000503498 AEBP1Q8IUX7 1158 aa13.62□□□□□ -0.23
EFCAB12-202ENST00000503498 RRP9O43818 475 aaKnown RBP13.61□□□□□ -0.23
EFCAB12-202ENST00000503498 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
EFCAB12-202ENST00000503498 HOMER1Q86YM7 354 aa13.61□□□□□ -0.23
EFCAB12-202ENST00000503498 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
EFCAB12-202ENST00000503498 GOLGA6L7A0A1B0GV03 622 aa13.6□□□□□ -0.23
EFCAB12-202ENST00000503498 DDX49Q9Y6V7 483 aaKnown RBP13.6□□□□□ -0.23
EFCAB12-202ENST00000503498 KIAA0754O94854 1291 aa13.59□□□□□ -0.23
EFCAB12-202ENST00000503498 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
EFCAB12-202ENST00000503498 BECN2A8MW95 431 aa13.59□□□□□ -0.23
EFCAB12-202ENST00000503498 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
EFCAB12-202ENST00000503498 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
EFCAB12-202ENST00000503498 TPD52L1Q16890 204 aaPredicted RBP13.58□□□□□ -0.24
EFCAB12-202ENST00000503498 IPO7O95373 1038 aaKnown RBP13.57□□□□□ -0.24
EFCAB12-202ENST00000503498 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
EFCAB12-202ENST00000503498 A0A0G2JS52 829 aa13.57□□□□□ -0.24
EFCAB12-202ENST00000503498 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
EFCAB12-202ENST00000503498 SENP3-EIF4A1A0A087X0R7 540 aa13.56□□□□□ -0.24
EFCAB12-202ENST00000503498 RASSF8Q8NHQ8 419 aa13.56□□□□□ -0.24
EFCAB12-202ENST00000503498 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
EFCAB12-202ENST00000503498 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
EFCAB12-202ENST00000503498 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
EFCAB12-202ENST00000503498 CCDC39Q9UFE4 941 aa13.55□□□□□ -0.24
EFCAB12-202ENST00000503498 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
EFCAB12-202ENST00000503498 RWDD1Q9H446 243 aaPredicted RBP13.54□□□□□ -0.24
EFCAB12-202ENST00000503498 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
EFCAB12-202ENST00000503498 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
EFCAB12-202ENST00000503498 UBE2Q2Q8WVN8 375 aa13.53□□□□□ -0.24
EFCAB12-202ENST00000503498 ESF1Q9H501 851 aaKnown RBP13.53□□□□□ -0.24
EFCAB12-202ENST00000503498 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
EFCAB12-202ENST00000503498 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.24
EFCAB12-202ENST00000503498 IFT57Q9NWB7 429 aa13.52□□□□□ -0.24
EFCAB12-202ENST00000503498 NUDCQ9Y266 331 aa13.52□□□□□ -0.24
EFCAB12-202ENST00000503498 ST18O60284 1047 aa13.52□□□□□ -0.25
EFCAB12-202ENST00000503498 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.25
EFCAB12-202ENST00000503498 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
EFCAB12-202ENST00000503498 HMGN5P82970 282 aaKnown RBP13.52□□□□□ -0.25
EFCAB12-202ENST00000503498 CDCA8Q53HL2 280 aa13.51□□□□□ -0.25
EFCAB12-202ENST00000503498 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
EFCAB12-202ENST00000503498 ATP6V1DQ9Y5K8 247 aa13.51□□□□□ -0.25
EFCAB12-202ENST00000503498 SF3A1Q15459 793 aaKnown RBP13.51□□□□□ -0.25
EFCAB12-202ENST00000503498 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
EFCAB12-202ENST00000503498 GPATCH11Q8N954 259 aa13.51□□□□□ -0.25
EFCAB12-202ENST00000503498 U2SURPO15042 1029 aaKnown RBP13.5□□□□□ -0.25
EFCAB12-202ENST00000503498 FANCIQ9NVI1 1328 aa13.5□□□□□ -0.25
EFCAB12-202ENST00000503498 C14orf37Q86TY3 774 aa13.49□□□□□ -0.25
EFCAB12-202ENST00000503498 CAGE1Q8TC20 777 aa13.49□□□□□ -0.25
EFCAB12-202ENST00000503498 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
EFCAB12-202ENST00000503498 MYO6Q9UM54 1294 aa13.48□□□□□ -0.25
EFCAB12-202ENST00000503498 HMGB1P09429 215 aaKnown RBP13.48□□□□□ -0.25
EFCAB12-202ENST00000503498 CLASRPQ8N2M8 674 aaKnown RBP13.48□□□□□ -0.25
EFCAB12-202ENST00000503498 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
EFCAB12-202ENST00000503498 AXDND1Q5T1B0 1012 aaPredicted RBP13.47□□□□□ -0.25
EFCAB12-202ENST00000503498 BCCIPQ9P287 314 aaKnown RBP eCLIP13.47□□□□□ -0.25
EFCAB12-202ENST00000503498 ANKRD20A12PQ8NF67 263 aa13.47□□□□□ -0.25
EFCAB12-202ENST00000503498 CLGNO14967 610 aa13.46□□□□□ -0.25
EFCAB12-202ENST00000503498 MRE11P49959 708 aa13.46□□□□□ -0.25
EFCAB12-202ENST00000503498 CCER2I3L3R5 266 aa13.46□□□□□ -0.26
EFCAB12-202ENST00000503498 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
EFCAB12-202ENST00000503498 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
EFCAB12-202ENST00000503498 CCDC173Q0VFZ6 552 aa13.44□□□□□ -0.26
EFCAB12-202ENST00000503498 FOXD4L5Q5VV16 416 aaPredicted RBP13.44□□□□□ -0.26
EFCAB12-202ENST00000503498 FOXD4L4Q8WXT5 416 aaPredicted RBP13.44□□□□□ -0.26
EFCAB12-202ENST00000503498 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
EFCAB12-202ENST00000503498 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms