RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 ARID4BQ4LE39 1312 aaPredicted RBP35.02■■■■□ 3.2
CCHCR1-217ENST00000503420 RICTORQ6R327 1708 aa34.99■■■■□ 3.19
CCHCR1-217ENST00000503420 POGZQ7Z3K3 1410 aa34.98■■■■□ 3.19
CCHCR1-217ENST00000503420 MYT1LQ9UL68 1186 aa34.94■■■■□ 3.18
CCHCR1-217ENST00000503420 MAGI2Q86UL8 1455 aa34.94■■■■□ 3.18
CCHCR1-217ENST00000503420 ZNF777Q9ULD5 760 aaPredicted RBP34.92■■■■□ 3.18
CCHCR1-217ENST00000503420 ZMYM4Q5VZL5 1548 aa34.91■■■■□ 3.18
CCHCR1-217ENST00000503420 CCNB3Q8WWL7 1395 aa34.9■■■■□ 3.18
CCHCR1-217ENST00000503420 VPS8Q8N3P4 1428 aa34.89■■■■□ 3.18
CCHCR1-217ENST00000503420 AFAP1Q8N556 730 aa34.89■■■■□ 3.18
CCHCR1-217ENST00000503420 CDC42BPBQ9Y5S2 1711 aa34.89■■■■□ 3.18
CCHCR1-217ENST00000503420 PREX2Q70Z35 1606 aa34.88■■■■□ 3.17
CCHCR1-217ENST00000503420 ZFYVE16Q7Z3T8 1539 aa34.88■■■■□ 3.17
CCHCR1-217ENST00000503420 CFDP1Q9UEE9 299 aaPredicted RBP34.88■■■■□ 3.17
CCHCR1-217ENST00000503420 ZNF518AQ6AHZ1 1483 aa34.88■■■■□ 3.17
CCHCR1-217ENST00000503420 ARHGEF40Q8TER5 1519 aa34.87■■■■□ 3.17
CCHCR1-217ENST00000503420 YEATS2Q9ULM3 1422 aa34.85■■■■□ 3.17
CCHCR1-217ENST00000503420 GPATCH8Q9UKJ3 1502 aaKnown RBP34.85■■■■□ 3.17
CCHCR1-217ENST00000503420 EHBP1L1Q8N3D4 1523 aa34.82■■■■□ 3.16
CCHCR1-217ENST00000503420 CDC42BPAQ5VT25 1732 aa34.81■■■■□ 3.16
CCHCR1-217ENST00000503420 ATP10AO60312 1499 aa34.76■■■■□ 3.15
CCHCR1-217ENST00000503420 ABCC1P33527 1531 aa34.76■■■■□ 3.15
CCHCR1-217ENST00000503420 TRAPPC8Q9Y2L5 1435 aa34.74■■■■□ 3.15
CCHCR1-217ENST00000503420 HNRNPMP52272 730 aaKnown RBP eCLIP34.73■■■■□ 3.15
CCHCR1-217ENST00000503420 APLP2Q06481 763 aa34.73■■■■□ 3.15
CCHCR1-217ENST00000503420 ARHGEF12Q9NZN5 1544 aa34.72■■■■□ 3.15
CCHCR1-217ENST00000503420 KDM5CP41229 1560 aa34.71■■■■□ 3.15
CCHCR1-217ENST00000503420 PLEKHH2Q8IVE3 1493 aa34.71■■■■□ 3.15
CCHCR1-217ENST00000503420 TIAM1Q13009 1591 aa34.7■■■■□ 3.15
CCHCR1-217ENST00000503420 MLECQ14165 292 aa34.7■■■■□ 3.15
CCHCR1-217ENST00000503420 C9orf84Q5VXU9 1444 aa34.7■■■■□ 3.15
CCHCR1-217ENST00000503420 BCORL1Q5H9F3 1711 aa34.68■■■■□ 3.14
CCHCR1-217ENST00000503420 MLH3Q9UHC1 1453 aa34.68■■■■□ 3.14
CCHCR1-217ENST00000503420 ADAMTSL3P82987 1691 aa34.67■■■■□ 3.14
CCHCR1-217ENST00000503420 KIAA1107Q9UPP5 1409 aa34.67■■■■□ 3.14
CCHCR1-217ENST00000503420 ITSN2Q9NZM3 1697 aa34.66■■■■□ 3.14
CCHCR1-217ENST00000503420 SAMD9LQ8IVG5 1584 aa34.66■■■■□ 3.14
CCHCR1-217ENST00000503420 HECW2Q9P2P5 1572 aa34.66■■■■□ 3.14
CCHCR1-217ENST00000503420 SPAG9O60271 1321 aaKnown RBP34.64■■■■□ 3.14
CCHCR1-217ENST00000503420 NCOA2Q15596 1464 aa34.64■■■■□ 3.14
CCHCR1-217ENST00000503420 SUPT6HQ7KZ85 1726 aaKnown RBP34.63■■■■□ 3.13
CCHCR1-217ENST00000503420 SYCP2Q9BX26 1530 aa34.62■■■■□ 3.13
CCHCR1-217ENST00000503420 PTPRMP28827 1452 aa34.62■■■■□ 3.13
CCHCR1-217ENST00000503420 LRRC9Q6ZRR7 1453 aa34.62■■■■□ 3.13
CCHCR1-217ENST00000503420 MAP3K1Q13233 1512 aa34.6■■■■□ 3.13
CCHCR1-217ENST00000503420 ZNF644Q9H582 1327 aaPredicted RBP34.59■■■■□ 3.13
CCHCR1-217ENST00000503420 KANK4Q5T7N3 995 aaPredicted RBP34.58■■■■□ 3.13
CCHCR1-217ENST00000503420 MADDQ8WXG6 1647 aa34.57■■■■□ 3.12
CCHCR1-217ENST00000503420 DIP2CQ9Y2E4 1556 aa34.53■■■■□ 3.12
CCHCR1-217ENST00000503420 PLPPR3Q6T4P5 718 aa34.53■■■■□ 3.12
CCHCR1-217ENST00000503420 SIGLEC1Q9BZZ2 1709 aa34.51■■■■□ 3.12
CCHCR1-217ENST00000503420 RSPH4AQ5TD94 716 aa34.49■■■■□ 3.11
CCHCR1-217ENST00000503420 ABCA6Q8N139 1617 aa34.48■■■■□ 3.11
CCHCR1-217ENST00000503420 KIDINS220Q9ULH0 1771 aa34.47■■■■□ 3.11
CCHCR1-217ENST00000503420 ESF1Q9H501 851 aaKnown RBP34.47■■■■□ 3.11
CCHCR1-217ENST00000503420 RIMS1Q86UR5 1692 aaKnown RBP34.47■■■■□ 3.11
CCHCR1-217ENST00000503420 REREQ9P2R6 1566 aa34.46■■■■□ 3.11
CCHCR1-217ENST00000503420 MBD5Q9P267 1494 aa34.43■■■■□ 3.1
CCHCR1-217ENST00000503420 ATP7AQ04656 1500 aa34.42■■■■□ 3.1
CCHCR1-217ENST00000503420 CAMSAP2Q08AD1 1489 aa34.41■■■■□ 3.1
CCHCR1-217ENST00000503420 AGLP35573 1532 aa34.4■■■■□ 3.1
CCHCR1-217ENST00000503420 TSPY4P0CV99 314 aa34.38■■■■□ 3.09
CCHCR1-217ENST00000503420 TSPY10P0CW01 314 aa34.38■■■■□ 3.09
CCHCR1-217ENST00000503420 FER1L4A9Z1Z3 1794 aa34.38■■■■□ 3.09
CCHCR1-217ENST00000503420 CCDC141Q6ZP82 1450 aa34.35■■■■□ 3.09
CCHCR1-217ENST00000503420 RTEL1-TNFRSF6BF6WH68 1400 aa34.35■■■■□ 3.09
CCHCR1-217ENST00000503420 MYOM3Q5VTT5 1437 aa34.35■■■■□ 3.09
CCHCR1-217ENST00000503420 A2MP01023 1474 aa34.33■■■■□ 3.09
CCHCR1-217ENST00000503420 INO80Q9ULG1 1556 aaPredicted RBP34.33■■■■□ 3.09
CCHCR1-217ENST00000503420 MIA2Q96PC5 1412 aa34.33■■■■□ 3.09
CCHCR1-217ENST00000503420 CEBPAP49715 358 aaPredicted RBP34.29■■■■□ 3.08
CCHCR1-217ENST00000503420 GGT6Q6P531 493 aa34.25■■■■□ 3.07
CCHCR1-217ENST00000503420 ARHGEF5Q12774 1597 aa34.23■■■■□ 3.07
CCHCR1-217ENST00000503420 CNTLNQ9NXG0 1405 aa34.22■■■■□ 3.07
CCHCR1-217ENST00000503420 DHX29Q7Z478 1369 aaKnown RBP34.22■■■■□ 3.07
CCHCR1-217ENST00000503420 ADGBQ8N7X0 1667 aa34.21■■■■□ 3.07
CCHCR1-217ENST00000503420 PPP6R1Q9UPN7 881 aa34.18■■■■□ 3.06
CCHCR1-217ENST00000503420 PLXNC1O60486 1568 aa34.18■■■■□ 3.06
CCHCR1-217ENST00000503420 LMTK3Q96Q04 1460 aa34.15■■■■□ 3.06
CCHCR1-217ENST00000503420 KIF3BO15066 747 aa34.15■■■■□ 3.06
CCHCR1-217ENST00000503420 HSPA2P54652 639 aa34.11■■■■□ 3.05
CCHCR1-217ENST00000503420 FGD6Q6ZV73 1430 aa34.1■■■■□ 3.05
CCHCR1-217ENST00000503420 ZMYM3Q14202 1370 aa34.1■■■■□ 3.05
CCHCR1-217ENST00000503420 PTPN23Q9H3S7 1636 aa34.08■■■■□ 3.05
CCHCR1-217ENST00000503420 SETD1BQ9UPS6 1966 aaKnown RBP34.06■■■■□ 3.04
CCHCR1-217ENST00000503420 UHRF1BP1Q6BDS2 1440 aa34.04■■■■□ 3.04
CCHCR1-217ENST00000503420 C3P01024 1663 aa34.03■■■■□ 3.04
CCHCR1-217ENST00000503420 MAST1Q9Y2H9 1570 aa34.03■■■■□ 3.04
CCHCR1-217ENST00000503420 FAM50AQ14320 339 aaKnown RBP34.01■■■■□ 3.03
CCHCR1-217ENST00000503420 ABCC5O15440 1437 aa34■■■■□ 3.03
CCHCR1-217ENST00000503420 TCOF1Q13428 1488 aaKnown RBP33.99■■■■□ 3.03
CCHCR1-217ENST00000503420 PREX1Q8TCU6 1659 aa33.99■■■■□ 3.03
CCHCR1-217ENST00000503420 WASHC2CQ9Y4E1 1318 aa33.99■■■■□ 3.03
CCHCR1-217ENST00000503420 MROH2AA6NES4 1674 aa33.98■■■■□ 3.03
CCHCR1-217ENST00000503420 CLTCQ00610 1675 aaKnown RBP33.96■■■■□ 3.03
CCHCR1-217ENST00000503420 RRP7BPQ9NSQ0 103 aa33.96■■■■□ 3.03
CCHCR1-217ENST00000503420 DAPK1P53355 1430 aa33.96■■■■□ 3.03
CCHCR1-217ENST00000503420 NPATQ14207 1427 aa33.96■■■■□ 3.03
CCHCR1-217ENST00000503420 SHANK2Q9UPX8 1470 aa33.94■■■■□ 3.02
CCHCR1-217ENST00000503420 CHIC2Q9UKJ5 165 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms