RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAM163AQ96GL9 167 aaPredicted RBP14.54□□□□□ -0.08
NIPBL-203ENST00000503274 BOLA1Q9Y3E2 137 aa14.54□□□□□ -0.08
NIPBL-203ENST00000503274 MICALL2Q8IY33 904 aa14.52□□□□□ -0.09
NIPBL-203ENST00000503274 CADPS2Q86UW7 1296 aa14.51□□□□□ -0.09
NIPBL-203ENST00000503274 TMEM121BQ9BXQ6 578 aaPredicted RBP14.49□□□□□ -0.09
NIPBL-203ENST00000503274 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
NIPBL-203ENST00000503274 SLAIN1Q8ND83 568 aa14.44□□□□□ -0.1
NIPBL-203ENST00000503274 LCE2DQ5TA82 110 aaPredicted RBP14.41□□□□□ -0.1
NIPBL-203ENST00000503274 PDE4AP27815 886 aa14.4□□□□□ -0.1
NIPBL-203ENST00000503274 PCDH10Q9P2E7 1040 aa14.39□□□□□ -0.11
NIPBL-203ENST00000503274 NCKAP5LQ9HCH0 1330 aa14.38□□□□□ -0.11
NIPBL-203ENST00000503274 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
NIPBL-203ENST00000503274 CRISPLD2Q9H0B8 497 aa14.37□□□□□ -0.11
NIPBL-203ENST00000503274 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.37□□□□□ -0.11
NIPBL-203ENST00000503274 WDR70Q9NW82 654 aa14.35□□□□□ -0.11
NIPBL-203ENST00000503274 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
NIPBL-203ENST00000503274 TMC2Q8TDI7 906 aa14.33□□□□□ -0.12
NIPBL-203ENST00000503274 GPHNQ9NQX3 736 aaPredicted RBP14.33□□□□□ -0.12
NIPBL-203ENST00000503274 MFSD10Q14728 455 aa14.29□□□□□ -0.12
NIPBL-203ENST00000503274 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
NIPBL-203ENST00000503274 C2orf72A6NCS6 295 aa14.28□□□□□ -0.12
NIPBL-203ENST00000503274 KIF3CO14782 793 aa14.28□□□□□ -0.12
NIPBL-203ENST00000503274 DDX27Q96GQ7 796 aaKnown RBP14.28□□□□□ -0.12
NIPBL-203ENST00000503274 PPP1R15BQ5SWA1 713 aa14.24□□□□□ -0.13
NIPBL-203ENST00000503274 FOXK1P85037 733 aa14.23□□□□□ -0.13
NIPBL-203ENST00000503274 DSG2Q14126 1118 aa14.23□□□□□ -0.13
NIPBL-203ENST00000503274 ST18O60284 1047 aa14.19□□□□□ -0.14
NIPBL-203ENST00000503274 E2F4Q16254 413 aa14.19□□□□□ -0.14
NIPBL-203ENST00000503274 PLPP6Q8IY26 295 aa14.18□□□□□ -0.14
NIPBL-203ENST00000503274 P3H3Q8IVL6 736 aa14.16□□□□□ -0.14
NIPBL-203ENST00000503274 CDAN1Q8IWY9 1227 aa14.14□□□□□ -0.15
NIPBL-203ENST00000503274 CAMK2BQ13554 666 aa14.13□□□□□ -0.15
NIPBL-203ENST00000503274 KCNV2Q8TDN2 545 aa14.13□□□□□ -0.15
NIPBL-203ENST00000503274 SNPHO15079 494 aa14.12□□□□□ -0.15
NIPBL-203ENST00000503274 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
NIPBL-203ENST00000503274 HOXB3P14651 431 aaPredicted RBP14.04□□□□□ -0.16
NIPBL-203ENST00000503274 EMILIN3Q9NT22 766 aa14.04□□□□□ -0.16
NIPBL-203ENST00000503274 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
NIPBL-203ENST00000503274 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
NIPBL-203ENST00000503274 SLC34A2O95436 690 aa14.01□□□□□ -0.17
NIPBL-203ENST00000503274 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
NIPBL-203ENST00000503274 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.17
NIPBL-203ENST00000503274 BCANQ96GW7 911 aa13.99□□□□□ -0.17
NIPBL-203ENST00000503274 DPYSL4O14531 572 aa13.98□□□□□ -0.17
NIPBL-203ENST00000503274 NBR1Q14596 966 aa13.97□□□□□ -0.17
NIPBL-203ENST00000503274 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
NIPBL-203ENST00000503274 PTCD2Q8WV60 388 aaKnown RBP13.97□□□□□ -0.17
NIPBL-203ENST00000503274 MAP3K9P80192 1104 aa13.96□□□□□ -0.17
NIPBL-203ENST00000503274 TBC1D12O60347 775 aa13.95□□□□□ -0.18
NIPBL-203ENST00000503274 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
NIPBL-203ENST00000503274 EMP3P54852 163 aa13.91□□□□□ -0.18
NIPBL-203ENST00000503274 PCDHGA4Q9Y5G9 962 aa13.91□□□□□ -0.18
NIPBL-203ENST00000503274 SPDYE16A6NNV3 312 aaPredicted RBP13.9□□□□□ -0.18
NIPBL-203ENST00000503274 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.18
NIPBL-203ENST00000503274 ZSWIM6Q9HCJ5 1215 aa13.89□□□□□ -0.19
NIPBL-203ENST00000503274 PDIA6Q15084 440 aa13.88□□□□□ -0.19
NIPBL-203ENST00000503274 HOXB1P14653 301 aaPredicted RBP13.86□□□□□ -0.19
NIPBL-203ENST00000503274 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
NIPBL-203ENST00000503274 SEMA3EO15041 775 aa13.85□□□□□ -0.19
NIPBL-203ENST00000503274 EVI5O60447 810 aa13.85□□□□□ -0.19
NIPBL-203ENST00000503274 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
NIPBL-203ENST00000503274 FAM205CA6NFA0 338 aa13.84□□□□□ -0.19
NIPBL-203ENST00000503274 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
NIPBL-203ENST00000503274 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
NIPBL-203ENST00000503274 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
NIPBL-203ENST00000503274 HS3ST6Q96QI5 342 aa13.82□□□□□ -0.2
NIPBL-203ENST00000503274 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
NIPBL-203ENST00000503274 ANO8Q9HCE9 1232 aaPredicted RBP13.8□□□□□ -0.2
NIPBL-203ENST00000503274 TESPA1A2RU30 521 aaPredicted RBP13.79□□□□□ -0.2
NIPBL-203ENST00000503274 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
NIPBL-203ENST00000503274 NUDT7P0C024 238 aa13.78□□□□□ -0.2
NIPBL-203ENST00000503274 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
NIPBL-203ENST00000503274 PTGER2P43116 358 aa13.75□□□□□ -0.21
NIPBL-203ENST00000503274 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
NIPBL-203ENST00000503274 MLLT3P42568 568 aaPredicted RBP13.74□□□□□ -0.21
NIPBL-203ENST00000503274 SMYD5Q6GMV2 418 aa13.74□□□□□ -0.21
NIPBL-203ENST00000503274 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
NIPBL-203ENST00000503274 ERBB3P21860 1342 aa13.72□□□□□ -0.21
NIPBL-203ENST00000503274 DDX12PQ92771 950 aa13.72□□□□□ -0.21
NIPBL-203ENST00000503274 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.21
NIPBL-203ENST00000503274 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
NIPBL-203ENST00000503274 KRTAP3-3Q9BYR6 98 aa13.68□□□□□ -0.22
NIPBL-203ENST00000503274 KRTAP3-2Q9BYR7 98 aa13.68□□□□□ -0.22
NIPBL-203ENST00000503274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
NIPBL-203ENST00000503274 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
NIPBL-203ENST00000503274 PHF14O94880 888 aa13.66□□□□□ -0.22
NIPBL-203ENST00000503274 FOSBP53539 338 aa13.64□□□□□ -0.23
NIPBL-203ENST00000503274 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
NIPBL-203ENST00000503274 EPAS1Q99814 870 aa13.64□□□□□ -0.23
NIPBL-203ENST00000503274 OSBPP22059 807 aa13.63□□□□□ -0.23
NIPBL-203ENST00000503274 PCDHGA10Q9Y5H3 936 aa13.63□□□□□ -0.23
NIPBL-203ENST00000503274 PSDA5PKW4 1024 aaPredicted RBP13.62□□□□□ -0.23
NIPBL-203ENST00000503274 LMOD2Q6P5Q4 547 aa13.62□□□□□ -0.23
NIPBL-203ENST00000503274 ZNF454Q8N9F8 522 aa13.62□□□□□ -0.23
NIPBL-203ENST00000503274 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
NIPBL-203ENST00000503274 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
NIPBL-203ENST00000503274 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
NIPBL-203ENST00000503274 ZDHHC16Q969W1 377 aa13.58□□□□□ -0.24
NIPBL-203ENST00000503274 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
NIPBL-203ENST00000503274 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms