RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 GOLGA2Q08379 1002 aa11□□□□□ -0.65
CDC42SE2-204ENST00000502639 MMRN1Q13201 1228 aa11□□□□□ -0.65
CDC42SE2-204ENST00000502639 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
CDC42SE2-204ENST00000502639 MKRN3Q13064 507 aaKnown RBP10.99□□□□□ -0.65
CDC42SE2-204ENST00000502639 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE2-204ENST00000502639 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
CDC42SE2-204ENST00000502639 KDM2AQ9Y2K7 1162 aa10.97□□□□□ -0.65
CDC42SE2-204ENST00000502639 SNPHO15079 494 aa10.95□□□□□ -0.66
CDC42SE2-204ENST00000502639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.66
CDC42SE2-204ENST00000502639 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
CDC42SE2-204ENST00000502639 POTEB3A0JP26 581 aa10.92□□□□□ -0.66
CDC42SE2-204ENST00000502639 POTEBQ6S5H4 581 aa10.92□□□□□ -0.66
CDC42SE2-204ENST00000502639 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
CDC42SE2-204ENST00000502639 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
CDC42SE2-204ENST00000502639 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
CDC42SE2-204ENST00000502639 EMP3P54852 163 aa10.86□□□□□ -0.67
CDC42SE2-204ENST00000502639 L3MBTL3Q96JM7 780 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE2-204ENST00000502639 KRTAP3-3Q9BYR6 98 aa10.86□□□□□ -0.67
CDC42SE2-204ENST00000502639 KRTAP3-2Q9BYR7 98 aa10.86□□□□□ -0.67
CDC42SE2-204ENST00000502639 HS3ST6Q96QI5 342 aa10.83□□□□□ -0.68
CDC42SE2-204ENST00000502639 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
CDC42SE2-204ENST00000502639 MICALL2Q8IY33 904 aa10.79□□□□□ -0.68
CDC42SE2-204ENST00000502639 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
CDC42SE2-204ENST00000502639 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE2-204ENST00000502639 BOLA1Q9Y3E2 137 aa10.76□□□□□ -0.69
CDC42SE2-204ENST00000502639 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
CDC42SE2-204ENST00000502639 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
CDC42SE2-204ENST00000502639 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
CDC42SE2-204ENST00000502639 MFSD10Q14728 455 aa10.67□□□□□ -0.7
CDC42SE2-204ENST00000502639 PDE4AP27815 886 aa10.66□□□□□ -0.7
CDC42SE2-204ENST00000502639 KIF3CO14782 793 aa10.65□□□□□ -0.7
CDC42SE2-204ENST00000502639 HOXB1P14653 301 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE2-204ENST00000502639 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE2-204ENST00000502639 G3V3G9 751 aa10.63□□□□□ -0.71
CDC42SE2-204ENST00000502639 C2orf72A6NCS6 295 aa10.62□□□□□ -0.71
CDC42SE2-204ENST00000502639 DSG2Q14126 1118 aa10.61□□□□□ -0.71
CDC42SE2-204ENST00000502639 WDR70Q9NW82 654 aa10.61□□□□□ -0.71
CDC42SE2-204ENST00000502639 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
CDC42SE2-204ENST00000502639 KCNV2Q8TDN2 545 aa10.6□□□□□ -0.71
CDC42SE2-204ENST00000502639 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
CDC42SE2-204ENST00000502639 ERBB3P21860 1342 aa10.59□□□□□ -0.71
CDC42SE2-204ENST00000502639 TMC2Q8TDI7 906 aa10.58□□□□□ -0.72
CDC42SE2-204ENST00000502639 FOXK1P85037 733 aa10.57□□□□□ -0.72
CDC42SE2-204ENST00000502639 DOK7Q18PE1 504 aa10.57□□□□□ -0.72
CDC42SE2-204ENST00000502639 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
CDC42SE2-204ENST00000502639 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
CDC42SE2-204ENST00000502639 E2F4Q16254 413 aa10.56□□□□□ -0.72
CDC42SE2-204ENST00000502639 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
CDC42SE2-204ENST00000502639 PLPP6Q8IY26 295 aa10.53□□□□□ -0.72
CDC42SE2-204ENST00000502639 EMILIN3Q9NT22 766 aa10.52□□□□□ -0.73
CDC42SE2-204ENST00000502639 RNF166Q96A37 237 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-204ENST00000502639 GPR153Q6NV75 609 aa10.49□□□□□ -0.73
CDC42SE2-204ENST00000502639 P3H3Q8IVL6 736 aa10.49□□□□□ -0.73
CDC42SE2-204ENST00000502639 BCANQ96GW7 911 aa10.48□□□□□ -0.73
CDC42SE2-204ENST00000502639 RIMBP2O15034 1052 aa10.47□□□□□ -0.73
CDC42SE2-204ENST00000502639 ARHGEF1Q92888 912 aaKnown RBP10.47□□□□□ -0.73
CDC42SE2-204ENST00000502639 ARIH1Q9Y4X5 557 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE2-204ENST00000502639 ZNF687Q8N1G0 1237 aa10.46□□□□□ -0.73
CDC42SE2-204ENST00000502639 MYT1LQ9UL68 1186 aa10.44□□□□□ -0.74
CDC42SE2-204ENST00000502639 ZSWIM6Q9HCJ5 1215 aa10.43□□□□□ -0.74
CDC42SE2-204ENST00000502639 DPYSL4O14531 572 aa10.42□□□□□ -0.74
CDC42SE2-204ENST00000502639 ARSIQ5FYB1 569 aa10.42□□□□□ -0.74
CDC42SE2-204ENST00000502639 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDC42SE2-204ENST00000502639 OXER1Q8TDS5 423 aa10.41□□□□□ -0.74
CDC42SE2-204ENST00000502639 NBR1Q14596 966 aa10.4□□□□□ -0.74
CDC42SE2-204ENST00000502639 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDC42SE2-204ENST00000502639 SEMA3EO15041 775 aa10.38□□□□□ -0.75
CDC42SE2-204ENST00000502639 SLC34A2O95436 690 aa10.38□□□□□ -0.75
CDC42SE2-204ENST00000502639 PTCD2Q8WV60 388 aaKnown RBP10.38□□□□□ -0.75
CDC42SE2-204ENST00000502639 TESPA1A2RU30 521 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE2-204ENST00000502639 PDIA6Q15084 440 aa10.34□□□□□ -0.75
CDC42SE2-204ENST00000502639 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
CDC42SE2-204ENST00000502639 ZNF316A6NFI3 1004 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE2-204ENST00000502639 MAP3K9P80192 1104 aa10.33□□□□□ -0.76
CDC42SE2-204ENST00000502639 KDM4FA0A1W2PPD8 638 aa10.32□□□□□ -0.76
CDC42SE2-204ENST00000502639 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE2-204ENST00000502639 PCDHGA4Q9Y5G9 962 aa10.32□□□□□ -0.76
CDC42SE2-204ENST00000502639 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE2-204ENST00000502639 EVI5O60447 810 aa10.28□□□□□ -0.76
CDC42SE2-204ENST00000502639 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
CDC42SE2-204ENST00000502639 LSM11P83369 360 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDC42SE2-204ENST00000502639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDC42SE2-204ENST00000502639 ANO8Q9HCE9 1232 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE2-204ENST00000502639 PTGER2P43116 358 aa10.26□□□□□ -0.77
CDC42SE2-204ENST00000502639 TBC1D12O60347 775 aa10.25□□□□□ -0.77
CDC42SE2-204ENST00000502639 NUDT7P0C024 238 aa10.25□□□□□ -0.77
CDC42SE2-204ENST00000502639 AXIN2Q9Y2T1 843 aa10.23□□□□□ -0.77
CDC42SE2-204ENST00000502639 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE2-204ENST00000502639 PRIM1P49642 420 aaKnown RBP10.22□□□□□ -0.77
CDC42SE2-204ENST00000502639 DDX12PQ92771 950 aa10.22□□□□□ -0.77
CDC42SE2-204ENST00000502639 LHX6Q9UPM6 363 aa10.21□□□□□ -0.77
CDC42SE2-204ENST00000502639 LMOD2Q6P5Q4 547 aa10.2□□□□□ -0.78
CDC42SE2-204ENST00000502639 GRXCR2A6NFK2 248 aa10.19□□□□□ -0.78
CDC42SE2-204ENST00000502639 OSBPP22059 807 aa10.19□□□□□ -0.78
CDC42SE2-204ENST00000502639 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
CDC42SE2-204ENST00000502639 TPRNQ4KMQ1 711 aa10.16□□□□□ -0.78
CDC42SE2-204ENST00000502639 PCDHGA10Q9Y5H3 936 aa10.16□□□□□ -0.78
CDC42SE2-204ENST00000502639 SMYD5Q6GMV2 418 aa10.15□□□□□ -0.78
CDC42SE2-204ENST00000502639 PBX2P40425 430 aa10.14□□□□□ -0.79
CDC42SE2-204ENST00000502639 FOSBP53539 338 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms