RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 MIA2Q96PC5 1412 aa13.67□□□□□ -0.22
LINC01550-202ENST00000502187 ABCC10Q5T3U5 1492 aa13.67□□□□□ -0.22
LINC01550-202ENST00000502187 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
LINC01550-202ENST00000502187 GPATCH8Q9UKJ3 1502 aaKnown RBP13.64□□□□□ -0.23
LINC01550-202ENST00000502187 WDR7Q9Y4E6 1490 aa13.64□□□□□ -0.23
LINC01550-202ENST00000502187 TTC37Q6PGP7 1564 aa13.64□□□□□ -0.23
LINC01550-202ENST00000502187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01550-202ENST00000502187 MYO5CQ9NQX4 1742 aa13.63□□□□□ -0.23
LINC01550-202ENST00000502187 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
LINC01550-202ENST00000502187 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
LINC01550-202ENST00000502187 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
LINC01550-202ENST00000502187 ITGAEP38570 1179 aa13.61□□□□□ -0.23
LINC01550-202ENST00000502187 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
LINC01550-202ENST00000502187 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
LINC01550-202ENST00000502187 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
LINC01550-202ENST00000502187 ABCA9Q8IUA7 1624 aa13.57□□□□□ -0.24
LINC01550-202ENST00000502187 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
LINC01550-202ENST00000502187 NPM3O75607 178 aaKnown RBP13.56□□□□□ -0.24
LINC01550-202ENST00000502187 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
LINC01550-202ENST00000502187 ARHGAP5Q13017 1502 aa13.56□□□□□ -0.24
LINC01550-202ENST00000502187 ZNF777Q9ULD5 760 aaPredicted RBP13.55□□□□□ -0.24
LINC01550-202ENST00000502187 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
LINC01550-202ENST00000502187 SAMD9LQ8IVG5 1584 aa13.54□□□□□ -0.24
LINC01550-202ENST00000502187 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
LINC01550-202ENST00000502187 CROCC2H7BZ55 1655 aa13.53□□□□□ -0.24
LINC01550-202ENST00000502187 ARAP3Q8WWN8 1544 aa13.53□□□□□ -0.24
LINC01550-202ENST00000502187 PLCH2O75038 1416 aa13.53□□□□□ -0.24
LINC01550-202ENST00000502187 DAPK1P53355 1430 aa13.52□□□□□ -0.24
LINC01550-202ENST00000502187 PTPRKQ15262 1439 aa13.52□□□□□ -0.25
LINC01550-202ENST00000502187 FAM69CQ0P6D2 419 aa13.52□□□□□ -0.25
LINC01550-202ENST00000502187 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
LINC01550-202ENST00000502187 ABCC5O15440 1437 aa13.5□□□□□ -0.25
LINC01550-202ENST00000502187 ARHGEF5Q12774 1597 aa13.5□□□□□ -0.25
LINC01550-202ENST00000502187 PLEKHH2Q8IVE3 1493 aa13.49□□□□□ -0.25
LINC01550-202ENST00000502187 GCC2Q8IWJ2 1684 aa13.49□□□□□ -0.25
LINC01550-202ENST00000502187 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
LINC01550-202ENST00000502187 SETD5Q9C0A6 1442 aa13.48□□□□□ -0.25
LINC01550-202ENST00000502187 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
LINC01550-202ENST00000502187 AKNAQ7Z591 1439 aa13.47□□□□□ -0.25
LINC01550-202ENST00000502187 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
LINC01550-202ENST00000502187 ABCC1P33527 1531 aa13.47□□□□□ -0.25
LINC01550-202ENST00000502187 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
LINC01550-202ENST00000502187 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
LINC01550-202ENST00000502187 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
LINC01550-202ENST00000502187 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
LINC01550-202ENST00000502187 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
LINC01550-202ENST00000502187 CFAP74Q9C0B2 1584 aa13.46□□□□□ -0.26
LINC01550-202ENST00000502187 FANCAO15360 1455 aa13.46□□□□□ -0.26
LINC01550-202ENST00000502187 GLI2P10070 1586 aa13.45□□□□□ -0.26
LINC01550-202ENST00000502187 MBD5Q9P267 1494 aa13.45□□□□□ -0.26
LINC01550-202ENST00000502187 CD109Q6YHK3 1445 aa13.45□□□□□ -0.26
LINC01550-202ENST00000502187 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
LINC01550-202ENST00000502187 DIP2BQ9P265 1576 aa13.45□□□□□ -0.26
LINC01550-202ENST00000502187 ROCK1Q13464 1354 aa13.45□□□□□ -0.26
LINC01550-202ENST00000502187 NAIPQ13075 1403 aa13.44□□□□□ -0.26
LINC01550-202ENST00000502187 CCER1Q8TC90 406 aaPredicted RBP13.44□□□□□ -0.26
LINC01550-202ENST00000502187 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
LINC01550-202ENST00000502187 MAP3K4Q9Y6R4 1608 aa13.44□□□□□ -0.26
LINC01550-202ENST00000502187 HNRNPMP52272 730 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC01550-202ENST00000502187 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
LINC01550-202ENST00000502187 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
LINC01550-202ENST00000502187 C9orf84Q5VXU9 1444 aa13.43□□□□□ -0.26
LINC01550-202ENST00000502187 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
LINC01550-202ENST00000502187 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
LINC01550-202ENST00000502187 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
LINC01550-202ENST00000502187 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
LINC01550-202ENST00000502187 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
LINC01550-202ENST00000502187 ADGRL1O94910 1474 aa13.41□□□□□ -0.26
LINC01550-202ENST00000502187 ANKRD30AQ9BXX3 1397 aa13.4□□□□□ -0.26
LINC01550-202ENST00000502187 HRCP23327 699 aa13.39□□□□□ -0.27
LINC01550-202ENST00000502187 KIF13AQ9H1H9 1805 aa13.39□□□□□ -0.27
LINC01550-202ENST00000502187 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
LINC01550-202ENST00000502187 FKBP8Q14318 412 aa13.39□□□□□ -0.27
LINC01550-202ENST00000502187 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
LINC01550-202ENST00000502187 TSPOAP1O95153 1857 aa13.37□□□□□ -0.27
LINC01550-202ENST00000502187 NEO1Q92859 1461 aa13.37□□□□□ -0.27
LINC01550-202ENST00000502187 KDM6BO15054 1643 aa13.37□□□□□ -0.27
LINC01550-202ENST00000502187 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
LINC01550-202ENST00000502187 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
LINC01550-202ENST00000502187 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
LINC01550-202ENST00000502187 SCAPERQ9BY12 1400 aa13.36□□□□□ -0.27
LINC01550-202ENST00000502187 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
LINC01550-202ENST00000502187 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
LINC01550-202ENST00000502187 BCANQ96GW7 911 aa13.34□□□□□ -0.27
LINC01550-202ENST00000502187 PPRC1Q5VV67 1664 aaKnown RBP13.34□□□□□ -0.27
LINC01550-202ENST00000502187 MYT1LQ9UL68 1186 aa13.34□□□□□ -0.27
LINC01550-202ENST00000502187 KIF15Q9NS87 1388 aa13.34□□□□□ -0.27
LINC01550-202ENST00000502187 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.27
LINC01550-202ENST00000502187 INO80Q9ULG1 1556 aaPredicted RBP13.33□□□□□ -0.28
LINC01550-202ENST00000502187 ZNF518AQ6AHZ1 1483 aa13.33□□□□□ -0.28
LINC01550-202ENST00000502187 TEX14Q8IWB6 1497 aa13.32□□□□□ -0.28
LINC01550-202ENST00000502187 ANKRD50Q9ULJ7 1429 aa13.32□□□□□ -0.28
LINC01550-202ENST00000502187 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
LINC01550-202ENST00000502187 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
LINC01550-202ENST00000502187 RTEL1-TNFRSF6BF6WH68 1400 aa13.32□□□□□ -0.28
LINC01550-202ENST00000502187 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
LINC01550-202ENST00000502187 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
LINC01550-202ENST00000502187 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
LINC01550-202ENST00000502187 KDM5CP41229 1560 aa13.3□□□□□ -0.28
LINC01550-202ENST00000502187 CLSPNQ9HAW4 1339 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms