RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 EMP3P54852 163 aa13.42□□□□□ -0.26
CRNDE-201ENST00000501177 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
CRNDE-201ENST00000501177 PPP1R37O75864 691 aa13.36□□□□□ -0.27
CRNDE-201ENST00000501177 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
CRNDE-201ENST00000501177 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
CRNDE-201ENST00000501177 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
CRNDE-201ENST00000501177 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
CRNDE-201ENST00000501177 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
CRNDE-201ENST00000501177 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
CRNDE-201ENST00000501177 KIF3CO14782 793 aa13.3□□□□□ -0.28
CRNDE-201ENST00000501177 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
CRNDE-201ENST00000501177 C2orf72A6NCS6 295 aa13.28□□□□□ -0.28
CRNDE-201ENST00000501177 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
CRNDE-201ENST00000501177 KRTAP3-3Q9BYR6 98 aa13.26□□□□□ -0.29
CRNDE-201ENST00000501177 KRTAP3-2Q9BYR7 98 aa13.26□□□□□ -0.29
CRNDE-201ENST00000501177 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
CRNDE-201ENST00000501177 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
CRNDE-201ENST00000501177 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
CRNDE-201ENST00000501177 SPNS2Q8IVW8 549 aa13.22□□□□□ -0.29
CRNDE-201ENST00000501177 ERBB3P21860 1342 aa13.21□□□□□ -0.29
CRNDE-201ENST00000501177 ARSIQ5FYB1 569 aa13.21□□□□□ -0.29
CRNDE-201ENST00000501177 KHSRPQ92945 711 aaKnown RBP eCLIP13.21□□□□□ -0.292e-10■■□□□ 11.6
CRNDE-201ENST00000501177 VARS2Q5ST30 1063 aaKnown RBP13.18□□□□□ -0.3
CRNDE-201ENST00000501177 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
CRNDE-201ENST00000501177 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
CRNDE-201ENST00000501177 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
CRNDE-201ENST00000501177 NACADO15069 1562 aa13.13□□□□□ -0.31
CRNDE-201ENST00000501177 SLC34A2O95436 690 aa13.07□□□□□ -0.32
CRNDE-201ENST00000501177 NUDT7P0C024 238 aa13.07□□□□□ -0.32
CRNDE-201ENST00000501177 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
CRNDE-201ENST00000501177 ZNF316A6NFI3 1004 aaPredicted RBP13.06□□□□□ -0.32
CRNDE-201ENST00000501177 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
CRNDE-201ENST00000501177 GPHNQ9NQX3 736 aaPredicted RBP13.03□□□□□ -0.32
CRNDE-201ENST00000501177 FOXK1P85037 733 aa13.02□□□□□ -0.33
CRNDE-201ENST00000501177 DSG2Q14126 1118 aa13.02□□□□□ -0.33
CRNDE-201ENST00000501177 GTPBP6O43824 516 aaPredicted RBP13.01□□□□□ -0.33
CRNDE-201ENST00000501177 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
CRNDE-201ENST00000501177 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
CRNDE-201ENST00000501177 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
CRNDE-201ENST00000501177 LHX6Q9UPM6 363 aa13□□□□□ -0.33
CRNDE-201ENST00000501177 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
CRNDE-201ENST00000501177 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
CRNDE-201ENST00000501177 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
CRNDE-201ENST00000501177 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
CRNDE-201ENST00000501177 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
CRNDE-201ENST00000501177 POTEEQ6S8J3 1075 aa12.93□□□□□ -0.34
CRNDE-201ENST00000501177 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
CRNDE-201ENST00000501177 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
CRNDE-201ENST00000501177 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
CRNDE-201ENST00000501177 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
CRNDE-201ENST00000501177 PPP1R15BQ5SWA1 713 aa12.86□□□□□ -0.35
CRNDE-201ENST00000501177 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
CRNDE-201ENST00000501177 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
CRNDE-201ENST00000501177 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
CRNDE-201ENST00000501177 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
CRNDE-201ENST00000501177 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
CRNDE-201ENST00000501177 PDE4AP27815 886 aa12.81□□□□□ -0.36
CRNDE-201ENST00000501177 PBX2P40425 430 aa12.81□□□□□ -0.36
CRNDE-201ENST00000501177 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
CRNDE-201ENST00000501177 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
CRNDE-201ENST00000501177 TBC1D12O60347 775 aa12.79□□□□□ -0.36
CRNDE-201ENST00000501177 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
CRNDE-201ENST00000501177 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
CRNDE-201ENST00000501177 RTN4Q9NQC3 1192 aaKnown RBP12.76□□□□□ -0.37
CRNDE-201ENST00000501177 MFSD10Q14728 455 aa12.75□□□□□ -0.37
CRNDE-201ENST00000501177 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
CRNDE-201ENST00000501177 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
CRNDE-201ENST00000501177 PSEN2P49810 448 aa12.74□□□□□ -0.37
CRNDE-201ENST00000501177 DMRTA1Q5VZB9 504 aa12.73□□□□□ -0.37
CRNDE-201ENST00000501177 PTGER2P43116 358 aa12.72□□□□□ -0.37
CRNDE-201ENST00000501177 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
CRNDE-201ENST00000501177 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
CRNDE-201ENST00000501177 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
CRNDE-201ENST00000501177 EMILIN3Q9NT22 766 aa12.7□□□□□ -0.38
CRNDE-201ENST00000501177 ADGRD1Q6QNK2 874 aa12.69□□□□□ -0.38
CRNDE-201ENST00000501177 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
CRNDE-201ENST00000501177 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
CRNDE-201ENST00000501177 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
CRNDE-201ENST00000501177 EVI5O60447 810 aa12.66□□□□□ -0.38
CRNDE-201ENST00000501177 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
CRNDE-201ENST00000501177 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
CRNDE-201ENST00000501177 FOSBP53539 338 aa12.64□□□□□ -0.39
CRNDE-201ENST00000501177 TK2O00142 265 aa12.61□□□□□ -0.39
CRNDE-201ENST00000501177 HRO43593 1189 aa12.61□□□□□ -0.39
CRNDE-201ENST00000501177 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
CRNDE-201ENST00000501177 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
CRNDE-201ENST00000501177 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
CRNDE-201ENST00000501177 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
CRNDE-201ENST00000501177 JPH4Q96JJ6 628 aa12.58□□□□□ -0.4
CRNDE-201ENST00000501177 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
CRNDE-201ENST00000501177 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
CRNDE-201ENST00000501177 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
CRNDE-201ENST00000501177 VPS9D1Q9Y2B5 631 aa12.55□□□□□ -0.4
CRNDE-201ENST00000501177 ZDHHC16Q969W1 377 aa12.53□□□□□ -0.4
CRNDE-201ENST00000501177 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
CRNDE-201ENST00000501177 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.41
CRNDE-201ENST00000501177 DPYSL4O14531 572 aa12.51□□□□□ -0.41
CRNDE-201ENST00000501177 PTPREP23469 700 aa12.51□□□□□ -0.41
CRNDE-201ENST00000501177 KCNH8Q96L42 1107 aa12.5□□□□□ -0.41
CRNDE-201ENST00000501177 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms