RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 GLI2P10070 1586 aa21.23■□□□□ 0.99
NEAT1-201ENST00000499732 PLEKHD1A6NEE1 506 aa21.22■□□□□ 0.99
NEAT1-201ENST00000499732 FAM50AQ14320 339 aaKnown RBP21.2■□□□□ 0.98
NEAT1-201ENST00000499732 MIER1Q8N108 512 aa21.2■□□□□ 0.98
NEAT1-201ENST00000499732 ITGAEP38570 1179 aa21.19■□□□□ 0.98
NEAT1-201ENST00000499732 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
NEAT1-201ENST00000499732 KIF14Q15058 1648 aa21.16■□□□□ 0.98
NEAT1-201ENST00000499732 PTPN23Q9H3S7 1636 aa21.16■□□□□ 0.98
NEAT1-201ENST00000499732 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
NEAT1-201ENST00000499732 MYT1Q01538 1121 aa21.13■□□□□ 0.97
NEAT1-201ENST00000499732 TEX14Q8IWB6 1497 aa21.12■□□□□ 0.97
NEAT1-201ENST00000499732 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
NEAT1-201ENST00000499732 TCOF1Q13428 1488 aaKnown RBP21.12■□□□□ 0.97
NEAT1-201ENST00000499732 WDR7Q9Y4E6 1490 aa21.11■□□□□ 0.97
NEAT1-201ENST00000499732 MIA2Q96PC5 1412 aa21.1■□□□□ 0.97
NEAT1-201ENST00000499732 RAB3GAP2Q9H2M9 1393 aa21.08■□□□□ 0.97
NEAT1-201ENST00000499732 SETD5Q9C0A6 1442 aa21.08■□□□□ 0.96
NEAT1-201ENST00000499732 PTPRKQ15262 1439 aa21.06■□□□□ 0.96
NEAT1-201ENST00000499732 ITSN2Q9NZM3 1697 aa21.06■□□□□ 0.96
NEAT1-201ENST00000499732 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
NEAT1-201ENST00000499732 GPATCH8Q9UKJ3 1502 aaKnown RBP21.03■□□□□ 0.96
NEAT1-201ENST00000499732 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
NEAT1-201ENST00000499732 KDM4FA0A1W2PPD8 638 aa21.03■□□□□ 0.96
NEAT1-201ENST00000499732 TTC37Q6PGP7 1564 aa21.03■□□□□ 0.96
NEAT1-201ENST00000499732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.02■□□□□ 0.95
NEAT1-201ENST00000499732 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
NEAT1-201ENST00000499732 CDC42BPAQ5VT25 1732 aa21■□□□□ 0.95
NEAT1-201ENST00000499732 CD109Q6YHK3 1445 aa20.99■□□□□ 0.95
NEAT1-201ENST00000499732 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
NEAT1-201ENST00000499732 PREX2Q70Z35 1606 aa20.97■□□□□ 0.95
NEAT1-201ENST00000499732 HFM1A2PYH4 1435 aa20.97■□□□□ 0.95
NEAT1-201ENST00000499732 COL17A1Q9UMD9 1497 aaPredicted RBP20.96■□□□□ 0.95
NEAT1-201ENST00000499732 MYO5CQ9NQX4 1742 aa20.95■□□□□ 0.95
NEAT1-201ENST00000499732 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
NEAT1-201ENST00000499732 ABCA9Q8IUA7 1624 aa20.92■□□□□ 0.94
NEAT1-201ENST00000499732 NAIPQ13075 1403 aa20.92■□□□□ 0.94
NEAT1-201ENST00000499732 GCC2Q8IWJ2 1684 aa20.92■□□□□ 0.94
NEAT1-201ENST00000499732 CDC42BPBQ9Y5S2 1711 aa20.92■□□□□ 0.94
NEAT1-201ENST00000499732 CAMSAP2Q08AD1 1489 aa20.91■□□□□ 0.94
NEAT1-201ENST00000499732 AKNAQ7Z591 1439 aa20.9■□□□□ 0.94
NEAT1-201ENST00000499732 DAPK1P53355 1430 aa20.89■□□□□ 0.93
NEAT1-201ENST00000499732 ARHGAP5Q13017 1502 aa20.89■□□□□ 0.93
NEAT1-201ENST00000499732 ZNF644Q9H582 1327 aaPredicted RBP20.88■□□□□ 0.93
NEAT1-201ENST00000499732 ADGRL1O94910 1474 aa20.88■□□□□ 0.93
NEAT1-201ENST00000499732 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
NEAT1-201ENST00000499732 ABCC5O15440 1437 aa20.87■□□□□ 0.93
NEAT1-201ENST00000499732 PLCH2O75038 1416 aa20.87■□□□□ 0.93
NEAT1-201ENST00000499732 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
NEAT1-201ENST00000499732 ARAP3Q8WWN8 1544 aa20.85■□□□□ 0.93
NEAT1-201ENST00000499732 CROCC2H7BZ55 1655 aa20.84■□□□□ 0.93
NEAT1-201ENST00000499732 CHIC2Q9UKJ5 165 aa20.82■□□□□ 0.92
NEAT1-201ENST00000499732 ROCK1Q13464 1354 aa20.81■□□□□ 0.92
NEAT1-201ENST00000499732 EFCAB2Q5VUJ9 269 aa20.81■□□□□ 0.92
NEAT1-201ENST00000499732 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
NEAT1-201ENST00000499732 RRP7BPQ9NSQ0 103 aa20.8■□□□□ 0.92
NEAT1-201ENST00000499732 ADGBQ8N7X0 1667 aa20.79■□□□□ 0.92
NEAT1-201ENST00000499732 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
NEAT1-201ENST00000499732 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
NEAT1-201ENST00000499732 SYCP2Q9BX26 1530 aa20.78■□□□□ 0.92
NEAT1-201ENST00000499732 KIAA1107Q9UPP5 1409 aa20.77■□□□□ 0.92
NEAT1-201ENST00000499732 FANCAO15360 1455 aa20.76■□□□□ 0.91
NEAT1-201ENST00000499732 ABCC1P33527 1531 aa20.76■□□□□ 0.91
NEAT1-201ENST00000499732 MBD5Q9P267 1494 aa20.76■□□□□ 0.91
NEAT1-201ENST00000499732 NEO1Q92859 1461 aa20.74■□□□□ 0.91
NEAT1-201ENST00000499732 SHANK2Q9UPX8 1470 aa20.74■□□□□ 0.91
NEAT1-201ENST00000499732 ADGRL2O95490 1459 aa20.73■□□□□ 0.91
NEAT1-201ENST00000499732 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.911e-56■■□□□ 12.6
NEAT1-201ENST00000499732 CFAP74Q9C0B2 1584 aa20.73■□□□□ 0.91
NEAT1-201ENST00000499732 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
NEAT1-201ENST00000499732 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
NEAT1-201ENST00000499732 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
NEAT1-201ENST00000499732 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
NEAT1-201ENST00000499732 NCOA1Q15788 1441 aa20.69■□□□□ 0.9
NEAT1-201ENST00000499732 SUPT16HQ9Y5B9 1047 aaKnown RBP20.69■□□□□ 0.9
NEAT1-201ENST00000499732 C9orf84Q5VXU9 1444 aa20.67■□□□□ 0.9
NEAT1-201ENST00000499732 ANKRD30AQ9BXX3 1397 aa20.67■□□□□ 0.9
NEAT1-201ENST00000499732 RAPGEF3O95398 923 aa20.65■□□□□ 0.9
NEAT1-201ENST00000499732 MAST1Q9Y2H9 1570 aa20.65■□□□□ 0.9
NEAT1-201ENST00000499732 DENND4BO75064 1496 aaPredicted RBP20.65■□□□□ 0.9
NEAT1-201ENST00000499732 SIN3AQ96ST3 1273 aa20.63■□□□□ 0.89
NEAT1-201ENST00000499732 TIMELESSQ9UNS1 1208 aa20.63■□□□□ 0.89
NEAT1-201ENST00000499732 TRAPPC8Q9Y2L5 1435 aa20.63■□□□□ 0.89
NEAT1-201ENST00000499732 SCAPERQ9BY12 1400 aa20.62■□□□□ 0.89
NEAT1-201ENST00000499732 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
NEAT1-201ENST00000499732 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
NEAT1-201ENST00000499732 POGZQ7Z3K3 1410 aa20.56■□□□□ 0.88
NEAT1-201ENST00000499732 PLXNC1O60486 1568 aa20.56■□□□□ 0.88
NEAT1-201ENST00000499732 RTEL1-TNFRSF6BF6WH68 1400 aa20.55■□□□□ 0.88
NEAT1-201ENST00000499732 ZNF518AQ6AHZ1 1483 aa20.55■□□□□ 0.88
NEAT1-201ENST00000499732 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
NEAT1-201ENST00000499732 ZFYVE16Q7Z3T8 1539 aa20.55■□□□□ 0.88
NEAT1-201ENST00000499732 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
NEAT1-201ENST00000499732 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
NEAT1-201ENST00000499732 ANKRD50Q9ULJ7 1429 aa20.55■□□□□ 0.88
NEAT1-201ENST00000499732 INO80Q9ULG1 1556 aaPredicted RBP20.54■□□□□ 0.88
NEAT1-201ENST00000499732 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
NEAT1-201ENST00000499732 SPAG9O60271 1321 aaKnown RBP20.53■□□□□ 0.88
NEAT1-201ENST00000499732 KDM5CP41229 1560 aa20.52■□□□□ 0.88
NEAT1-201ENST00000499732 PZPP20742 1482 aa20.51■□□□□ 0.87
NEAT1-201ENST00000499732 ATP7AQ04656 1500 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms