RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 YEATS2Q9ULM3 1422 aa27.36■■□□□ 1.97
AP004609.1-201ENST00000498872 ZFYVE16Q7Z3T8 1539 aa27.35■■□□□ 1.97
AP004609.1-201ENST00000498872 CCDC18Q5T9S5 1454 aa27.35■■□□□ 1.97
AP004609.1-201ENST00000498872 SIGLEC1Q9BZZ2 1709 aa27.35■■□□□ 1.97
AP004609.1-201ENST00000498872 ARHGAP5Q13017 1502 aa27.35■■□□□ 1.97
AP004609.1-201ENST00000498872 MADDQ8WXG6 1647 aa27.35■■□□□ 1.97
AP004609.1-201ENST00000498872 EFCAB2Q5VUJ9 269 aa27.34■■□□□ 1.97
AP004609.1-201ENST00000498872 POGZQ7Z3K3 1410 aa27.34■■□□□ 1.97
AP004609.1-201ENST00000498872 PTPRMP28827 1452 aa27.33■■□□□ 1.96
AP004609.1-201ENST00000498872 CDC42BPBQ9Y5S2 1711 aa27.32■■□□□ 1.96
AP004609.1-201ENST00000498872 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
AP004609.1-201ENST00000498872 RIMS1Q86UR5 1692 aaKnown RBP27.28■■□□□ 1.96
AP004609.1-201ENST00000498872 MAGI2Q86UL8 1455 aa27.27■■□□□ 1.96
AP004609.1-201ENST00000498872 PREX2Q70Z35 1606 aa27.26■■□□□ 1.95
AP004609.1-201ENST00000498872 CDC42BPAQ5VT25 1732 aa27.23■■□□□ 1.95
AP004609.1-201ENST00000498872 MLECQ14165 292 aa27.21■■□□□ 1.95
AP004609.1-201ENST00000498872 ZNF518AQ6AHZ1 1483 aa27.21■■□□□ 1.95
AP004609.1-201ENST00000498872 AFAP1Q8N556 730 aa27.21■■□□□ 1.95
AP004609.1-201ENST00000498872 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
AP004609.1-201ENST00000498872 KDM5CP41229 1560 aa27.18■■□□□ 1.94
AP004609.1-201ENST00000498872 MYT1LQ9UL68 1186 aa27.17■■□□□ 1.94
AP004609.1-201ENST00000498872 ATP10AO60312 1499 aa27.17■■□□□ 1.94
AP004609.1-201ENST00000498872 ABCC1P33527 1531 aa27.15■■□□□ 1.94
AP004609.1-201ENST00000498872 ITSN2Q9NZM3 1697 aa27.15■■□□□ 1.94
AP004609.1-201ENST00000498872 FER1L4A9Z1Z3 1794 aa27.15■■□□□ 1.94
AP004609.1-201ENST00000498872 ARHGEF12Q9NZN5 1544 aa27.14■■□□□ 1.94
AP004609.1-201ENST00000498872 CEP162Q5TB80 1403 aa27.14■■□□□ 1.94
AP004609.1-201ENST00000498872 C9orf84Q5VXU9 1444 aa27.14■■□□□ 1.94
AP004609.1-201ENST00000498872 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
AP004609.1-201ENST00000498872 TRAPPC8Q9Y2L5 1435 aa27.12■■□□□ 1.93
AP004609.1-201ENST00000498872 ZNF777Q9ULD5 760 aaPredicted RBP27.11■■□□□ 1.93
AP004609.1-201ENST00000498872 DIP2CQ9Y2E4 1556 aa27.1■■□□□ 1.93
AP004609.1-201ENST00000498872 ABCA6Q8N139 1617 aa27.09■■□□□ 1.93
AP004609.1-201ENST00000498872 SAMD9LQ8IVG5 1584 aa27.08■■□□□ 1.93
AP004609.1-201ENST00000498872 GPATCH8Q9UKJ3 1502 aaKnown RBP27.07■■□□□ 1.92
AP004609.1-201ENST00000498872 MTUS2Q5JR59 1369 aa27.07■■□□□ 1.92
AP004609.1-201ENST00000498872 LMTK3Q96Q04 1460 aa27.05■■□□□ 1.92
AP004609.1-201ENST00000498872 MLH3Q9UHC1 1453 aa27.04■■□□□ 1.92
AP004609.1-201ENST00000498872 SYCP2Q9BX26 1530 aa27.03■■□□□ 1.92
AP004609.1-201ENST00000498872 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
AP004609.1-201ENST00000498872 CCNB3Q8WWL7 1395 aa27■■□□□ 1.91
AP004609.1-201ENST00000498872 HNRNPMP52272 730 aaKnown RBP eCLIP26.99■■□□□ 1.91
AP004609.1-201ENST00000498872 CFDP1Q9UEE9 299 aaPredicted RBP26.98■■□□□ 1.91
AP004609.1-201ENST00000498872 REREQ9P2R6 1566 aa26.98■■□□□ 1.91
AP004609.1-201ENST00000498872 EHBP1L1Q8N3D4 1523 aa26.97■■□□□ 1.91
AP004609.1-201ENST00000498872 ILDR1Q86SU0 546 aaPredicted RBP26.97■■□□□ 1.91
AP004609.1-201ENST00000498872 HSPA2P54652 639 aa26.96■■□□□ 1.91
AP004609.1-201ENST00000498872 TIAM1Q13009 1591 aa26.96■■□□□ 1.91
AP004609.1-201ENST00000498872 CEBPAP49715 358 aaPredicted RBP26.95■■□□□ 1.91
AP004609.1-201ENST00000498872 SPAG9O60271 1321 aaKnown RBP26.9■■□□□ 1.9
AP004609.1-201ENST00000498872 ZNF644Q9H582 1327 aaPredicted RBP26.89■■□□□ 1.9
AP004609.1-201ENST00000498872 AGLP35573 1532 aa26.89■■□□□ 1.9
AP004609.1-201ENST00000498872 PLEKHH2Q8IVE3 1493 aa26.88■■□□□ 1.89
AP004609.1-201ENST00000498872 SUPT6HQ7KZ85 1726 aaKnown RBP26.87■■□□□ 1.89
AP004609.1-201ENST00000498872 KIAA1107Q9UPP5 1409 aa26.87■■□□□ 1.89
AP004609.1-201ENST00000498872 ATP7AQ04656 1500 aa26.87■■□□□ 1.89
AP004609.1-201ENST00000498872 PREX1Q8TCU6 1659 aa26.86■■□□□ 1.89
AP004609.1-201ENST00000498872 INO80Q9ULG1 1556 aaPredicted RBP26.86■■□□□ 1.89
AP004609.1-201ENST00000498872 C3P01024 1663 aa26.85■■□□□ 1.89
AP004609.1-201ENST00000498872 ESF1Q9H501 851 aaKnown RBP26.82■■□□□ 1.88
AP004609.1-201ENST00000498872 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
AP004609.1-201ENST00000498872 NCOA2Q15596 1464 aa26.82■■□□□ 1.88
AP004609.1-201ENST00000498872 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
AP004609.1-201ENST00000498872 A2MP01023 1474 aa26.76■■□□□ 1.87
AP004609.1-201ENST00000498872 PLXNC1O60486 1568 aa26.75■■□□□ 1.87
AP004609.1-201ENST00000498872 ADGBQ8N7X0 1667 aa26.74■■□□□ 1.87
AP004609.1-201ENST00000498872 SETD1BQ9UPS6 1966 aaKnown RBP26.73■■□□□ 1.87
AP004609.1-201ENST00000498872 CAMSAP2Q08AD1 1489 aa26.73■■□□□ 1.87
AP004609.1-201ENST00000498872 UHRF1BP1Q6BDS2 1440 aa26.73■■□□□ 1.87
AP004609.1-201ENST00000498872 LRRC9Q6ZRR7 1453 aa26.72■■□□□ 1.87
AP004609.1-201ENST00000498872 CLTCQ00610 1675 aaKnown RBP26.71■■□□□ 1.87
AP004609.1-201ENST00000498872 CNTLNQ9NXG0 1405 aa26.7■■□□□ 1.86
AP004609.1-201ENST00000498872 MROH2AA6NES4 1674 aa26.69■■□□□ 1.86
AP004609.1-201ENST00000498872 KANK4Q5T7N3 995 aaPredicted RBP26.68■■□□□ 1.86
AP004609.1-201ENST00000498872 GGT6Q6P531 493 aa26.68■■□□□ 1.86
AP004609.1-201ENST00000498872 STRCQ7RTU9 1775 aa26.66■■□□□ 1.86
AP004609.1-201ENST00000498872 CCDC141Q6ZP82 1450 aa26.66■■□□□ 1.86
AP004609.1-201ENST00000498872 RTEL1-TNFRSF6BF6WH68 1400 aa26.64■■□□□ 1.86
AP004609.1-201ENST00000498872 ZMYM3Q14202 1370 aa26.64■■□□□ 1.85
AP004609.1-201ENST00000498872 FBXO41Q8TF61 875 aa26.61■■□□□ 1.85
AP004609.1-201ENST00000498872 MAP3K1Q13233 1512 aa26.6■■□□□ 1.85
AP004609.1-201ENST00000498872 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
AP004609.1-201ENST00000498872 DHX29Q7Z478 1369 aaKnown RBP26.58■■□□□ 1.85
AP004609.1-201ENST00000498872 RSPH4AQ5TD94 716 aa26.55■■□□□ 1.84
AP004609.1-201ENST00000498872 NPATQ14207 1427 aa26.55■■□□□ 1.84
AP004609.1-201ENST00000498872 KIF3BO15066 747 aa26.54■■□□□ 1.84
AP004609.1-201ENST00000498872 MYOM3Q5VTT5 1437 aa26.52■■□□□ 1.84
AP004609.1-201ENST00000498872 TSPY4P0CV99 314 aa26.52■■□□□ 1.84
AP004609.1-201ENST00000498872 TSPY10P0CW01 314 aa26.52■■□□□ 1.84
AP004609.1-201ENST00000498872 MYO3AQ8NEV4 1616 aa26.51■■□□□ 1.84
AP004609.1-201ENST00000498872 PTPRKQ15262 1439 aa26.5■■□□□ 1.83
AP004609.1-201ENST00000498872 APLP2Q06481 763 aa26.49■■□□□ 1.83
AP004609.1-201ENST00000498872 DMRT2Q9Y5R5 561 aa26.49■■□□□ 1.83
AP004609.1-201ENST00000498872 CAMSAP1Q5T5Y3 1602 aa26.48■■□□□ 1.83
AP004609.1-201ENST00000498872 CERKQ8TCT0 537 aa26.48■■□□□ 1.83
AP004609.1-201ENST00000498872 PPP6R1Q9UPN7 881 aa26.47■■□□□ 1.83
AP004609.1-201ENST00000498872 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
AP004609.1-201ENST00000498872 ZNF142P52746 1687 aaPredicted RBP26.46■■□□□ 1.83
AP004609.1-201ENST00000498872 NCOA1Q15788 1441 aa26.45■■□□□ 1.83
AP004609.1-201ENST00000498872 MAST1Q9Y2H9 1570 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms