RNA–Protein interactions for RNA: ENST00000498517.5

ARHGEF3-215, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene ARHGEF3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-215ENST00000498517 SPNS2Q8IVW8 549 aa10□□□□□ -0.81
ARHGEF3-215ENST00000498517 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
ARHGEF3-215ENST00000498517 KRTAP3-2Q9BYR7 98 aa10□□□□□ -0.81
ARHGEF3-215ENST00000498517 SOX12O15370 315 aa9.99□□□□□ -0.81
ARHGEF3-215ENST00000498517 FBXO22Q8NEZ5 403 aa9.98□□□□□ -0.81
ARHGEF3-215ENST00000498517 BCL11BQ9C0K0 894 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF3-215ENST00000498517 SCRIBQ14160 1630 aa9.96□□□□□ -0.81
ARHGEF3-215ENST00000498517 MMRN1Q13201 1228 aa9.96□□□□□ -0.82
ARHGEF3-215ENST00000498517 PKD2Q13563 968 aa9.96□□□□□ -0.82
ARHGEF3-215ENST00000498517 RGL2O15211 777 aa9.94□□□□□ -0.82
ARHGEF3-215ENST00000498517 HOXB1P14653 301 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF3-215ENST00000498517 MFRPQ9BY79 579 aa9.94□□□□□ -0.82
ARHGEF3-215ENST00000498517 STK24Q9Y6E0 443 aa9.93□□□□□ -0.82
ARHGEF3-215ENST00000498517 ECM2O94769 699 aaPredicted RBP9.92□□□□□ -0.82
ARHGEF3-215ENST00000498517 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
ARHGEF3-215ENST00000498517 STK25O00506 426 aa9.89□□□□□ -0.83
ARHGEF3-215ENST00000498517 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
ARHGEF3-215ENST00000498517 NLRP6P59044 892 aa9.87□□□□□ -0.83
ARHGEF3-215ENST00000498517 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
ARHGEF3-215ENST00000498517 UNC13AQ9UPW8 1703 aa9.86□□□□□ -0.83
ARHGEF3-215ENST00000498517 KHSRPQ92945 711 aaKnown RBP eCLIP9.84□□□□□ -0.83
ARHGEF3-215ENST00000498517 ERBB3P21860 1342 aa9.83□□□□□ -0.84
ARHGEF3-215ENST00000498517 VARS2Q5ST30 1063 aaKnown RBP9.83□□□□□ -0.84
ARHGEF3-215ENST00000498517 KIF3CO14782 793 aa9.82□□□□□ -0.84
ARHGEF3-215ENST00000498517 PPP1R37O75864 691 aa9.8□□□□□ -0.84
ARHGEF3-215ENST00000498517 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
ARHGEF3-215ENST00000498517 C2orf72A6NCS6 295 aa9.79□□□□□ -0.84
ARHGEF3-215ENST00000498517 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
ARHGEF3-215ENST00000498517 ZSWIM6Q9HCJ5 1215 aa9.79□□□□□ -0.84
ARHGEF3-215ENST00000498517 TAOK2Q9UL54 1235 aa9.79□□□□□ -0.84
ARHGEF3-215ENST00000498517 BICRAQ9NZM4 1560 aa9.74□□□□□ -0.85
ARHGEF3-215ENST00000498517 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
ARHGEF3-215ENST00000498517 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
ARHGEF3-215ENST00000498517 NUDT7P0C024 238 aa9.69□□□□□ -0.86
ARHGEF3-215ENST00000498517 SUPT5HO00267 1087 aaKnown RBP9.68□□□□□ -0.86
ARHGEF3-215ENST00000498517 POTEEQ6S8J3 1075 aa9.67□□□□□ -0.86
ARHGEF3-215ENST00000498517 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
ARHGEF3-215ENST00000498517 PCDHGA4Q9Y5G9 962 aa9.65□□□□□ -0.86
ARHGEF3-215ENST00000498517 SLC34A2O95436 690 aa9.64□□□□□ -0.87
ARHGEF3-215ENST00000498517 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
ARHGEF3-215ENST00000498517 LHX6Q9UPM6 363 aa9.64□□□□□ -0.87
ARHGEF3-215ENST00000498517 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
ARHGEF3-215ENST00000498517 RNF166Q96A37 237 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF3-215ENST00000498517 CECR2Q9BXF3 1484 aa9.6□□□□□ -0.87
ARHGEF3-215ENST00000498517 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
ARHGEF3-215ENST00000498517 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
ARHGEF3-215ENST00000498517 MYT1LQ9UL68 1186 aa9.6□□□□□ -0.87
ARHGEF3-215ENST00000498517 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
ARHGEF3-215ENST00000498517 BAZ1AQ9NRL2 1556 aaPredicted RBP9.59□□□□□ -0.87
ARHGEF3-215ENST00000498517 CHGAP10645 457 aaKnown RBP9.59□□□□□ -0.87
ARHGEF3-215ENST00000498517 LSM11P83369 360 aaKnown RBP eCLIP9.58□□□□□ -0.88
ARHGEF3-215ENST00000498517 DSG2Q14126 1118 aa9.56□□□□□ -0.88
ARHGEF3-215ENST00000498517 FOXK1P85037 733 aa9.55□□□□□ -0.88
ARHGEF3-215ENST00000498517 RSF1Q96T23 1441 aaPredicted RBP9.55□□□□□ -0.88
ARHGEF3-215ENST00000498517 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
ARHGEF3-215ENST00000498517 PTCD2Q8WV60 388 aaKnown RBP9.54□□□□□ -0.88
ARHGEF3-215ENST00000498517 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
ARHGEF3-215ENST00000498517 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
ARHGEF3-215ENST00000498517 SMARCA4P51532 1647 aa9.53□□□□□ -0.88
ARHGEF3-215ENST00000498517 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
ARHGEF3-215ENST00000498517 PBX2P40425 430 aa9.49□□□□□ -0.89
ARHGEF3-215ENST00000498517 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
ARHGEF3-215ENST00000498517 PTGER2P43116 358 aa9.47□□□□□ -0.89
ARHGEF3-215ENST00000498517 CRISPLD2Q9H0B8 497 aa9.47□□□□□ -0.89
ARHGEF3-215ENST00000498517 WIZO95785 1651 aa9.47□□□□□ -0.89
ARHGEF3-215ENST00000498517 PSEN2P49810 448 aa9.46□□□□□ -0.9
ARHGEF3-215ENST00000498517 NCKAP5LQ9HCH0 1330 aa9.46□□□□□ -0.9
ARHGEF3-215ENST00000498517 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
ARHGEF3-215ENST00000498517 ARHGAP33O14559 1287 aa9.44□□□□□ -0.9
ARHGEF3-215ENST00000498517 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
ARHGEF3-215ENST00000498517 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
ARHGEF3-215ENST00000498517 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
ARHGEF3-215ENST00000498517 UPF1Q92900 1129 aaKnown RBP eCLIP9.43□□□□□ -0.9
ARHGEF3-215ENST00000498517 ATAD2BQ9ULI0 1458 aa9.42□□□□□ -0.9
ARHGEF3-215ENST00000498517 CC2D2AQ9P2K1 1620 aa9.42□□□□□ -0.9
ARHGEF3-215ENST00000498517 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
ARHGEF3-215ENST00000498517 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
ARHGEF3-215ENST00000498517 HRO43593 1189 aa9.4□□□□□ -0.9
ARHGEF3-215ENST00000498517 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.91
ARHGEF3-215ENST00000498517 PPP1R15BQ5SWA1 713 aa9.39□□□□□ -0.91
ARHGEF3-215ENST00000498517 NCAPD3P42695 1498 aa9.39□□□□□ -0.91
ARHGEF3-215ENST00000498517 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
ARHGEF3-215ENST00000498517 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
ARHGEF3-215ENST00000498517 KCNK17Q96T54 332 aa9.36□□□□□ -0.91
ARHGEF3-215ENST00000498517 TBC1D12O60347 775 aa9.35□□□□□ -0.91
ARHGEF3-215ENST00000498517 TK2O00142 265 aa9.34□□□□□ -0.91
ARHGEF3-215ENST00000498517 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
ARHGEF3-215ENST00000498517 HMGXB3Q12766 1538 aa9.33□□□□□ -0.92
ARHGEF3-215ENST00000498517 ZNF454Q8N9F8 522 aa9.33□□□□□ -0.92
ARHGEF3-215ENST00000498517 RYDENQ9NUL5 291 aaKnown RBP9.32□□□□□ -0.92
ARHGEF3-215ENST00000498517 LARP6Q9BRS8 491 aaKnown RBP9.31□□□□□ -0.92
ARHGEF3-215ENST00000498517 PDE4AP27815 886 aa9.3□□□□□ -0.92
ARHGEF3-215ENST00000498517 FOSBP53539 338 aa9.3□□□□□ -0.92
ARHGEF3-215ENST00000498517 MFSD10Q14728 455 aa9.3□□□□□ -0.92
ARHGEF3-215ENST00000498517 EMILIN3Q9NT22 766 aa9.3□□□□□ -0.92
ARHGEF3-215ENST00000498517 VPS9D1Q9Y2B5 631 aa9.3□□□□□ -0.92
ARHGEF3-215ENST00000498517 CCDC88BA6NC98 1476 aa9.29□□□□□ -0.92
ARHGEF3-215ENST00000498517 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
ARHGEF3-215ENST00000498517 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
ARHGEF3-215ENST00000498517 BCL2L12Q9HB09 334 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms