RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
HMGXB4-208ENST00000498325 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
HMGXB4-208ENST00000498325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.22□□□□□ -0.61
HMGXB4-208ENST00000498325 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
HMGXB4-208ENST00000498325 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
HMGXB4-208ENST00000498325 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
HMGXB4-208ENST00000498325 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
HMGXB4-208ENST00000498325 ARSIQ5FYB1 569 aa11.17□□□□□ -0.62
HMGXB4-208ENST00000498325 PTGER2P43116 358 aa11.15□□□□□ -0.62
HMGXB4-208ENST00000498325 DNAJC5Q9H3Z4 198 aa11.14□□□□□ -0.63
HMGXB4-208ENST00000498325 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
HMGXB4-208ENST00000498325 NLRP6P59044 892 aa11.12□□□□□ -0.63
HMGXB4-208ENST00000498325 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
HMGXB4-208ENST00000498325 KHSRPQ92945 711 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMGXB4-208ENST00000498325 FBXO22Q8NEZ5 403 aa11.07□□□□□ -0.64
HMGXB4-208ENST00000498325 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
HMGXB4-208ENST00000498325 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
HMGXB4-208ENST00000498325 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
HMGXB4-208ENST00000498325 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
HMGXB4-208ENST00000498325 MFRPQ9BY79 579 aa11.01□□□□□ -0.65
HMGXB4-208ENST00000498325 C2orf72A6NCS6 295 aa11□□□□□ -0.65
HMGXB4-208ENST00000498325 NUDT7P0C024 238 aa11□□□□□ -0.65
HMGXB4-208ENST00000498325 KIF3CO14782 793 aa10.99□□□□□ -0.65
HMGXB4-208ENST00000498325 PBX2P40425 430 aa10.99□□□□□ -0.65
HMGXB4-208ENST00000498325 STK25O00506 426 aa10.97□□□□□ -0.65
HMGXB4-208ENST00000498325 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
HMGXB4-208ENST00000498325 PCDHGA4Q9Y5G9 962 aa10.94□□□□□ -0.66
HMGXB4-208ENST00000498325 SLC34A2O95436 690 aa10.93□□□□□ -0.66
HMGXB4-208ENST00000498325 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
HMGXB4-208ENST00000498325 CCDC180Q9P1Z9 1646 aa10.93□□□□□ -0.66
HMGXB4-208ENST00000498325 TMC2Q8TDI7 906 aa10.92□□□□□ -0.66
HMGXB4-208ENST00000498325 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
HMGXB4-208ENST00000498325 ECM2O94769 699 aaPredicted RBP10.88□□□□□ -0.67
HMGXB4-208ENST00000498325 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
HMGXB4-208ENST00000498325 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
HMGXB4-208ENST00000498325 PSDA5PKW4 1024 aaPredicted RBP10.84□□□□□ -0.67
HMGXB4-208ENST00000498325 ARHGAP33O14559 1287 aa10.84□□□□□ -0.67
HMGXB4-208ENST00000498325 ADGRD1Q6QNK2 874 aa10.84□□□□□ -0.67
HMGXB4-208ENST00000498325 RGL2O15211 777 aa10.78□□□□□ -0.68
HMGXB4-208ENST00000498325 PPP1R37O75864 691 aa10.78□□□□□ -0.68
HMGXB4-208ENST00000498325 TK2O00142 265 aa10.76□□□□□ -0.69
HMGXB4-208ENST00000498325 PTCD2Q8WV60 388 aaKnown RBP10.76□□□□□ -0.69
HMGXB4-208ENST00000498325 RB1CC1Q8TDY2 1594 aa10.76□□□□□ -0.69
HMGXB4-208ENST00000498325 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
HMGXB4-208ENST00000498325 PSEN2P49810 448 aa10.75□□□□□ -0.69
HMGXB4-208ENST00000498325 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
HMGXB4-208ENST00000498325 HRO43593 1189 aa10.73□□□□□ -0.69
HMGXB4-208ENST00000498325 PKD2Q13563 968 aa10.73□□□□□ -0.69
HMGXB4-208ENST00000498325 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
HMGXB4-208ENST00000498325 STAC3Q96MF2 364 aa10.72□□□□□ -0.69
HMGXB4-208ENST00000498325 FOXK1P85037 733 aa10.71□□□□□ -0.69
HMGXB4-208ENST00000498325 PLPP6Q8IY26 295 aa10.71□□□□□ -0.69
HMGXB4-208ENST00000498325 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
HMGXB4-208ENST00000498325 TBC1D12O60347 775 aa10.69□□□□□ -0.7
HMGXB4-208ENST00000498325 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
HMGXB4-208ENST00000498325 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
HMGXB4-208ENST00000498325 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
HMGXB4-208ENST00000498325 DSG2Q14126 1118 aa10.65□□□□□ -0.7
HMGXB4-208ENST00000498325 VPS9D1Q9Y2B5 631 aa10.6□□□□□ -0.71
HMGXB4-208ENST00000498325 CECR2Q9BXF3 1484 aa10.6□□□□□ -0.71
HMGXB4-208ENST00000498325 PTPN5P54829 565 aa10.58□□□□□ -0.72
HMGXB4-208ENST00000498325 HS6ST3Q8IZP7 471 aa10.56□□□□□ -0.72
HMGXB4-208ENST00000498325 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
HMGXB4-208ENST00000498325 OXER1Q8TDS5 423 aa10.55□□□□□ -0.72
HMGXB4-208ENST00000498325 UPF1Q92900 1129 aaKnown RBP eCLIP10.55□□□□□ -0.72
HMGXB4-208ENST00000498325 BICRAQ9NZM4 1560 aa10.55□□□□□ -0.72
HMGXB4-208ENST00000498325 BCL2L12Q9HB09 334 aa10.54□□□□□ -0.72
HMGXB4-208ENST00000498325 SLC4A5Q9BY07 1137 aa10.53□□□□□ -0.72
HMGXB4-208ENST00000498325 NACADO15069 1562 aa10.52□□□□□ -0.72
HMGXB4-208ENST00000498325 CC2D2AQ9P2K1 1620 aa10.51□□□□□ -0.73
HMGXB4-208ENST00000498325 GOLGA8CPA6NN73 597 aa10.5□□□□□ -0.73
HMGXB4-208ENST00000498325 RGS20O76081 388 aa10.5□□□□□ -0.73
HMGXB4-208ENST00000498325 PTPREP23469 700 aa10.5□□□□□ -0.73
HMGXB4-208ENST00000498325 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
HMGXB4-208ENST00000498325 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
HMGXB4-208ENST00000498325 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
HMGXB4-208ENST00000498325 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
HMGXB4-208ENST00000498325 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
HMGXB4-208ENST00000498325 FOSBP53539 338 aa10.48□□□□□ -0.73
HMGXB4-208ENST00000498325 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
HMGXB4-208ENST00000498325 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
HMGXB4-208ENST00000498325 WNT2BQ93097 391 aa10.47□□□□□ -0.73
HMGXB4-208ENST00000498325 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
HMGXB4-208ENST00000498325 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
HMGXB4-208ENST00000498325 IRX2Q9BZI1 471 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-208ENST00000498325 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
HMGXB4-208ENST00000498325 A0A0G2JS52 829 aa10.43□□□□□ -0.74
HMGXB4-208ENST00000498325 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
HMGXB4-208ENST00000498325 JPH4Q96JJ6 628 aa10.42□□□□□ -0.74
HMGXB4-208ENST00000498325 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
HMGXB4-208ENST00000498325 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
HMGXB4-208ENST00000498325 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
HMGXB4-208ENST00000498325 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
HMGXB4-208ENST00000498325 EVI5O60447 810 aa10.4□□□□□ -0.74
HMGXB4-208ENST00000498325 PDE4AP27815 886 aa10.4□□□□□ -0.74
HMGXB4-208ENST00000498325 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
HMGXB4-208ENST00000498325 NCKAP5LQ9HCH0 1330 aa10.37□□□□□ -0.75
HMGXB4-208ENST00000498325 MAP3K9P80192 1104 aa10.33□□□□□ -0.76
HMGXB4-208ENST00000498325 PPP1R3GB7ZBB8 358 aa10.32□□□□□ -0.76
HMGXB4-208ENST00000498325 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms