RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 ADGRL1O94910 1474 aa23.38■■□□□ 1.33
HPS1-214ENST00000498219 EFCAB2Q5VUJ9 269 aa23.38■■□□□ 1.33
HPS1-214ENST00000498219 SCAPERQ9BY12 1400 aa23.36■■□□□ 1.33
HPS1-214ENST00000498219 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
HPS1-214ENST00000498219 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
HPS1-214ENST00000498219 KDM4FA0A1W2PPD8 638 aa23.33■■□□□ 1.33
HPS1-214ENST00000498219 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
HPS1-214ENST00000498219 GPATCH8Q9UKJ3 1502 aaKnown RBP23.3■■□□□ 1.32
HPS1-214ENST00000498219 POGZQ7Z3K3 1410 aa23.3■■□□□ 1.32
HPS1-214ENST00000498219 ZNF777Q9ULD5 760 aaPredicted RBP23.28■■□□□ 1.32
HPS1-214ENST00000498219 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.32
HPS1-214ENST00000498219 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
HPS1-214ENST00000498219 ITSN2Q9NZM3 1697 aa23.25■■□□□ 1.31
HPS1-214ENST00000498219 ABCC1P33527 1531 aa23.25■■□□□ 1.31
HPS1-214ENST00000498219 ARHGEF40Q8TER5 1519 aa23.25■■□□□ 1.31
HPS1-214ENST00000498219 ARHGEF12Q9NZN5 1544 aa23.25■■□□□ 1.31
HPS1-214ENST00000498219 SAMD9LQ8IVG5 1584 aa23.25■■□□□ 1.31
HPS1-214ENST00000498219 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
HPS1-214ENST00000498219 YEATS2Q9ULM3 1422 aa23.24■■□□□ 1.31
HPS1-214ENST00000498219 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
HPS1-214ENST00000498219 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
HPS1-214ENST00000498219 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
HPS1-214ENST00000498219 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
HPS1-214ENST00000498219 CFDP1Q9UEE9 299 aaPredicted RBP23.22■■□□□ 1.31
HPS1-214ENST00000498219 NCOA2Q15596 1464 aa23.22■■□□□ 1.31
HPS1-214ENST00000498219 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
HPS1-214ENST00000498219 ZNF518AQ6AHZ1 1483 aa23.19■■□□□ 1.3
HPS1-214ENST00000498219 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
HPS1-214ENST00000498219 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
HPS1-214ENST00000498219 SIGLEC1Q9BZZ2 1709 aa23.18■■□□□ 1.3
HPS1-214ENST00000498219 KDM5CP41229 1560 aa23.18■■□□□ 1.3
HPS1-214ENST00000498219 HNRNPMP52272 730 aaKnown RBP eCLIP23.17■■□□□ 1.3
HPS1-214ENST00000498219 MYT1LQ9UL68 1186 aa23.17■■□□□ 1.3
HPS1-214ENST00000498219 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
HPS1-214ENST00000498219 ARID4BQ4LE39 1312 aaPredicted RBP23.16■■□□□ 1.3
HPS1-214ENST00000498219 ZNF644Q9H582 1327 aaPredicted RBP23.16■■□□□ 1.3
HPS1-214ENST00000498219 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.3
HPS1-214ENST00000498219 APLP2Q06481 763 aa23.14■■□□□ 1.29
HPS1-214ENST00000498219 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
HPS1-214ENST00000498219 ABCA6Q8N139 1617 aa23.1■■□□□ 1.29
HPS1-214ENST00000498219 DIP2CQ9Y2E4 1556 aa23.1■■□□□ 1.29
HPS1-214ENST00000498219 ATP10AO60312 1499 aa23.09■■□□□ 1.29
HPS1-214ENST00000498219 PLEKHH2Q8IVE3 1493 aa23.09■■□□□ 1.29
HPS1-214ENST00000498219 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
HPS1-214ENST00000498219 MLH3Q9UHC1 1453 aa23.08■■□□□ 1.29
HPS1-214ENST00000498219 ADAMTSL3P82987 1691 aa23.08■■□□□ 1.29
HPS1-214ENST00000498219 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.28
HPS1-214ENST00000498219 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
HPS1-214ENST00000498219 C9orf84Q5VXU9 1444 aa23.06■■□□□ 1.28
HPS1-214ENST00000498219 MLECQ14165 292 aa23.05■■□□□ 1.28
HPS1-214ENST00000498219 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
HPS1-214ENST00000498219 SPAG9O60271 1321 aaKnown RBP23.04■■□□□ 1.28
HPS1-214ENST00000498219 MBD5Q9P267 1494 aa23.03■■□□□ 1.28
HPS1-214ENST00000498219 MYOM3Q5VTT5 1437 aa23■■□□□ 1.27
HPS1-214ENST00000498219 RIMS1Q86UR5 1692 aaKnown RBP23■■□□□ 1.27
HPS1-214ENST00000498219 ATP7AQ04656 1500 aa23■■□□□ 1.27
HPS1-214ENST00000498219 INO80Q9ULG1 1556 aaPredicted RBP23■■□□□ 1.27
HPS1-214ENST00000498219 REREQ9P2R6 1566 aa22.96■■□□□ 1.27
HPS1-214ENST00000498219 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
HPS1-214ENST00000498219 PTPRMP28827 1452 aa22.95■■□□□ 1.26
HPS1-214ENST00000498219 CCDC141Q6ZP82 1450 aa22.94■■□□□ 1.26
HPS1-214ENST00000498219 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
HPS1-214ENST00000498219 MIA2Q96PC5 1412 aa22.92■■□□□ 1.26
HPS1-214ENST00000498219 ARHGEF5Q12774 1597 aa22.92■■□□□ 1.26
HPS1-214ENST00000498219 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
HPS1-214ENST00000498219 PTPN23Q9H3S7 1636 aa22.9■■□□□ 1.26
HPS1-214ENST00000498219 AGLP35573 1532 aa22.89■■□□□ 1.26
HPS1-214ENST00000498219 ADGBQ8N7X0 1667 aa22.89■■□□□ 1.25
HPS1-214ENST00000498219 A2MP01023 1474 aa22.88■■□□□ 1.25
HPS1-214ENST00000498219 RTEL1-TNFRSF6BF6WH68 1400 aa22.86■■□□□ 1.25
HPS1-214ENST00000498219 FGD6Q6ZV73 1430 aa22.86■■□□□ 1.25
HPS1-214ENST00000498219 RSPH4AQ5TD94 716 aa22.86■■□□□ 1.25
HPS1-214ENST00000498219 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
HPS1-214ENST00000498219 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
HPS1-214ENST00000498219 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
HPS1-214ENST00000498219 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
HPS1-214ENST00000498219 CEBPAP49715 358 aaPredicted RBP22.8■■□□□ 1.24
HPS1-214ENST00000498219 CROCC2H7BZ55 1655 aa22.8■■□□□ 1.24
HPS1-214ENST00000498219 MAST1Q9Y2H9 1570 aa22.8■■□□□ 1.24
HPS1-214ENST00000498219 ABCC5O15440 1437 aa22.78■■□□□ 1.24
HPS1-214ENST00000498219 DHX29Q7Z478 1369 aaKnown RBP22.77■■□□□ 1.24
HPS1-214ENST00000498219 GGT6Q6P531 493 aa22.77■■□□□ 1.24
HPS1-214ENST00000498219 DNMT1P26358 1616 aaKnown RBP22.76■■□□□ 1.23
HPS1-214ENST00000498219 DAPK1P53355 1430 aa22.75■■□□□ 1.23
HPS1-214ENST00000498219 FAM50AQ14320 339 aaKnown RBP22.75■■□□□ 1.23
HPS1-214ENST00000498219 ESF1Q9H501 851 aaKnown RBP22.75■■□□□ 1.23
HPS1-214ENST00000498219 C3P01024 1663 aa22.74■■□□□ 1.23
HPS1-214ENST00000498219 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
HPS1-214ENST00000498219 KIF3BO15066 747 aa22.72■■□□□ 1.23
HPS1-214ENST00000498219 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
HPS1-214ENST00000498219 SHANK2Q9UPX8 1470 aa22.7■■□□□ 1.22
HPS1-214ENST00000498219 CNTLNQ9NXG0 1405 aa22.67■■□□□ 1.22
HPS1-214ENST00000498219 RRP7BPQ9NSQ0 103 aa22.67■■□□□ 1.22
HPS1-214ENST00000498219 MROH2AA6NES4 1674 aa22.67■■□□□ 1.22
HPS1-214ENST00000498219 LMTK3Q96Q04 1460 aa22.66■■□□□ 1.22
HPS1-214ENST00000498219 KIF15Q9NS87 1388 aa22.65■■□□□ 1.22
HPS1-214ENST00000498219 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.21
HPS1-214ENST00000498219 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
HPS1-214ENST00000498219 PREX1Q8TCU6 1659 aa22.63■■□□□ 1.21
HPS1-214ENST00000498219 SETD1BQ9UPS6 1966 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms