RNA–Protein interactions for RNA: ENST00000498194.1

PCK1-206, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

TSL 2

Gene PCK1, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-206ENST00000498194 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
PCK1-206ENST00000498194 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
PCK1-206ENST00000498194 MAGI2Q86UL8 1455 aa18.37■□□□□ 0.53
PCK1-206ENST00000498194 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
PCK1-206ENST00000498194 PCF11O94913 1555 aaKnown RBP18.37■□□□□ 0.53
PCK1-206ENST00000498194 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
PCK1-206ENST00000498194 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
PCK1-206ENST00000498194 ARID4BQ4LE39 1312 aaPredicted RBP18.33■□□□□ 0.53
PCK1-206ENST00000498194 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
PCK1-206ENST00000498194 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
PCK1-206ENST00000498194 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
PCK1-206ENST00000498194 KDM5CP41229 1560 aa18.3■□□□□ 0.52
PCK1-206ENST00000498194 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
PCK1-206ENST00000498194 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
PCK1-206ENST00000498194 CLIP1P30622 1438 aa18.29■□□□□ 0.52
PCK1-206ENST00000498194 ARHGAP5Q13017 1502 aa18.28■□□□□ 0.52
PCK1-206ENST00000498194 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
PCK1-206ENST00000498194 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
PCK1-206ENST00000498194 ARHGEF12Q9NZN5 1544 aa18.27■□□□□ 0.51
PCK1-206ENST00000498194 ATP10AO60312 1499 aa18.26■□□□□ 0.51
PCK1-206ENST00000498194 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
PCK1-206ENST00000498194 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
PCK1-206ENST00000498194 AFAP1Q8N556 730 aa18.26■□□□□ 0.51
PCK1-206ENST00000498194 C9orf84Q5VXU9 1444 aa18.25■□□□□ 0.51
PCK1-206ENST00000498194 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
PCK1-206ENST00000498194 ABCC1P33527 1531 aa18.23■□□□□ 0.51
PCK1-206ENST00000498194 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
PCK1-206ENST00000498194 DIP2CQ9Y2E4 1556 aa18.21■□□□□ 0.51
PCK1-206ENST00000498194 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
PCK1-206ENST00000498194 MLECQ14165 292 aa18.2■□□□□ 0.5
PCK1-206ENST00000498194 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
PCK1-206ENST00000498194 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
PCK1-206ENST00000498194 ABCA6Q8N139 1617 aa18.19■□□□□ 0.5
PCK1-206ENST00000498194 FER1L4A9Z1Z3 1794 aa18.18■□□□□ 0.5
PCK1-206ENST00000498194 ITSN2Q9NZM3 1697 aa18.17■□□□□ 0.5
PCK1-206ENST00000498194 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
PCK1-206ENST00000498194 HSPA2P54652 639 aa18.15■□□□□ 0.5
PCK1-206ENST00000498194 SAMD9LQ8IVG5 1584 aa18.15■□□□□ 0.5
PCK1-206ENST00000498194 KIDINS220Q9ULH0 1771 aa18.13■□□□□ 0.49
PCK1-206ENST00000498194 AGLP35573 1532 aa18.13■□□□□ 0.49
PCK1-206ENST00000498194 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
PCK1-206ENST00000498194 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
PCK1-206ENST00000498194 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
PCK1-206ENST00000498194 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
PCK1-206ENST00000498194 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCK1-206ENST00000498194 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
PCK1-206ENST00000498194 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
PCK1-206ENST00000498194 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
PCK1-206ENST00000498194 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
PCK1-206ENST00000498194 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
PCK1-206ENST00000498194 INO80Q9ULG1 1556 aaPredicted RBP18.03■□□□□ 0.48
PCK1-206ENST00000498194 CCNB3Q8WWL7 1395 aa18.03■□□□□ 0.48
PCK1-206ENST00000498194 FBXO41Q8TF61 875 aa18.02■□□□□ 0.48
PCK1-206ENST00000498194 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
PCK1-206ENST00000498194 EHBP1L1Q8N3D4 1523 aa18.02■□□□□ 0.47
PCK1-206ENST00000498194 PLXNC1O60486 1568 aa18.01■□□□□ 0.47
PCK1-206ENST00000498194 C3P01024 1663 aa18.01■□□□□ 0.47
PCK1-206ENST00000498194 ATP7AQ04656 1500 aa18.01■□□□□ 0.47
PCK1-206ENST00000498194 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
PCK1-206ENST00000498194 ZNF644Q9H582 1327 aaPredicted RBP18■□□□□ 0.47
PCK1-206ENST00000498194 PLEKHH2Q8IVE3 1493 aa18■□□□□ 0.47
PCK1-206ENST00000498194 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
PCK1-206ENST00000498194 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
PCK1-206ENST00000498194 STRCQ7RTU9 1775 aa17.96■□□□□ 0.47
PCK1-206ENST00000498194 CNTLNQ9NXG0 1405 aa17.96■□□□□ 0.47
PCK1-206ENST00000498194 A2MP01023 1474 aa17.95■□□□□ 0.46
PCK1-206ENST00000498194 SETD1BQ9UPS6 1966 aaKnown RBP17.94■□□□□ 0.46
PCK1-206ENST00000498194 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
PCK1-206ENST00000498194 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
PCK1-206ENST00000498194 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
PCK1-206ENST00000498194 FOXD1Q16676 465 aa17.92■□□□□ 0.46
PCK1-206ENST00000498194 MROH2AA6NES4 1674 aa17.91■□□□□ 0.46
PCK1-206ENST00000498194 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
PCK1-206ENST00000498194 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.46
PCK1-206ENST00000498194 NPATQ14207 1427 aa17.89■□□□□ 0.46
PCK1-206ENST00000498194 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.46
PCK1-206ENST00000498194 CAMSAP2Q08AD1 1489 aa17.88■□□□□ 0.45
PCK1-206ENST00000498194 CERKQ8TCT0 537 aa17.87■□□□□ 0.45
PCK1-206ENST00000498194 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
PCK1-206ENST00000498194 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
PCK1-206ENST00000498194 PTPRKQ15262 1439 aa17.86■□□□□ 0.45
PCK1-206ENST00000498194 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
PCK1-206ENST00000498194 CLTCQ00610 1675 aaKnown RBP17.86■□□□□ 0.45
PCK1-206ENST00000498194 PTPRTO14522 1441 aa17.85■□□□□ 0.45
PCK1-206ENST00000498194 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
PCK1-206ENST00000498194 LRRC9Q6ZRR7 1453 aa17.85■□□□□ 0.45
PCK1-206ENST00000498194 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
PCK1-206ENST00000498194 GGT6Q6P531 493 aa17.83■□□□□ 0.44
PCK1-206ENST00000498194 KANK4Q5T7N3 995 aaPredicted RBP17.82■□□□□ 0.44
PCK1-206ENST00000498194 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
PCK1-206ENST00000498194 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
PCK1-206ENST00000498194 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
PCK1-206ENST00000498194 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
PCK1-206ENST00000498194 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
PCK1-206ENST00000498194 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
PCK1-206ENST00000498194 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
PCK1-206ENST00000498194 ZNF142P52746 1687 aaPredicted RBP17.79■□□□□ 0.44
PCK1-206ENST00000498194 RSPH4AQ5TD94 716 aa17.77■□□□□ 0.44
PCK1-206ENST00000498194 CEP170BQ9Y4F5 1589 aaPredicted RBP17.77■□□□□ 0.44
PCK1-206ENST00000498194 PLA2R1Q13018 1463 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms