RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
AFF3-215ENST00000498090 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
AFF3-215ENST00000498090 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
AFF3-215ENST00000498090 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
AFF3-215ENST00000498090 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
AFF3-215ENST00000498090 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
AFF3-215ENST00000498090 FAM69CQ0P6D2 419 aa18.18■□□□□ 0.5
AFF3-215ENST00000498090 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
AFF3-215ENST00000498090 PREX2Q70Z35 1606 aa18.18■□□□□ 0.5
AFF3-215ENST00000498090 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
AFF3-215ENST00000498090 TCOF1Q13428 1488 aaKnown RBP18.18■□□□□ 0.5
AFF3-215ENST00000498090 DIP2BQ9P265 1576 aa18.18■□□□□ 0.5
AFF3-215ENST00000498090 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
AFF3-215ENST00000498090 KIF13AQ9H1H9 1805 aa18.16■□□□□ 0.5
AFF3-215ENST00000498090 MYO5CQ9NQX4 1742 aa18.14■□□□□ 0.5
AFF3-215ENST00000498090 CDC42BPBQ9Y5S2 1711 aa18.14■□□□□ 0.5
AFF3-215ENST00000498090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.13■□□□□ 0.49
AFF3-215ENST00000498090 PLCH2O75038 1416 aa18.13■□□□□ 0.49
AFF3-215ENST00000498090 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
AFF3-215ENST00000498090 CFDP1Q9UEE9 299 aaPredicted RBP18.12■□□□□ 0.49
AFF3-215ENST00000498090 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
AFF3-215ENST00000498090 CAMSAP2Q08AD1 1489 aa18.12■□□□□ 0.49
AFF3-215ENST00000498090 ARHGAP5Q13017 1502 aa18.11■□□□□ 0.49
AFF3-215ENST00000498090 GLI2P10070 1586 aa18.11■□□□□ 0.49
AFF3-215ENST00000498090 ARAP3Q8WWN8 1544 aa18.1■□□□□ 0.49
AFF3-215ENST00000498090 SAMD9LQ8IVG5 1584 aa18.1■□□□□ 0.49
AFF3-215ENST00000498090 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
AFF3-215ENST00000498090 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
AFF3-215ENST00000498090 CD109Q6YHK3 1445 aa18.06■□□□□ 0.48
AFF3-215ENST00000498090 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
AFF3-215ENST00000498090 ITGAEP38570 1179 aa18.04■□□□□ 0.48
AFF3-215ENST00000498090 FANCAO15360 1455 aa18.04■□□□□ 0.48
AFF3-215ENST00000498090 DNMT1P26358 1616 aaKnown RBP18.02■□□□□ 0.48
AFF3-215ENST00000498090 ABCC1P33527 1531 aa18.02■□□□□ 0.48
AFF3-215ENST00000498090 SYCP2Q9BX26 1530 aa18.02■□□□□ 0.48
AFF3-215ENST00000498090 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
AFF3-215ENST00000498090 ABCC5O15440 1437 aa18.02■□□□□ 0.48
AFF3-215ENST00000498090 DAPK1P53355 1430 aa18.02■□□□□ 0.48
AFF3-215ENST00000498090 EFCAB2Q5VUJ9 269 aa18.02■□□□□ 0.47
AFF3-215ENST00000498090 ARHGEF12Q9NZN5 1544 aa18.01■□□□□ 0.47
AFF3-215ENST00000498090 MIER1Q8N108 512 aa18■□□□□ 0.47
AFF3-215ENST00000498090 SETD5Q9C0A6 1442 aa18■□□□□ 0.47
AFF3-215ENST00000498090 GTF3C3Q9Y5Q9 886 aa17.99■□□□□ 0.47
AFF3-215ENST00000498090 ARHGEF5Q12774 1597 aa17.99■□□□□ 0.47
AFF3-215ENST00000498090 PLEKHH2Q8IVE3 1493 aa17.99■□□□□ 0.47
AFF3-215ENST00000498090 KIAA1107Q9UPP5 1409 aa17.99■□□□□ 0.47
AFF3-215ENST00000498090 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
AFF3-215ENST00000498090 RAB3GAP2Q9H2M9 1393 aa17.98■□□□□ 0.47
AFF3-215ENST00000498090 CROCC2H7BZ55 1655 aa17.98■□□□□ 0.47
AFF3-215ENST00000498090 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
AFF3-215ENST00000498090 CFAP74Q9C0B2 1584 aa17.96■□□□□ 0.47
AFF3-215ENST00000498090 AKNAQ7Z591 1439 aa17.96■□□□□ 0.47
AFF3-215ENST00000498090 CCDC141Q6ZP82 1450 aa17.96■□□□□ 0.47
AFF3-215ENST00000498090 ADGRL1O94910 1474 aa17.95■□□□□ 0.46
AFF3-215ENST00000498090 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
AFF3-215ENST00000498090 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
AFF3-215ENST00000498090 NEO1Q92859 1461 aa17.94■□□□□ 0.46
AFF3-215ENST00000498090 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
AFF3-215ENST00000498090 TSPOAP1O95153 1857 aa17.94■□□□□ 0.46
AFF3-215ENST00000498090 SCAPERQ9BY12 1400 aa17.92■□□□□ 0.46
AFF3-215ENST00000498090 CHIC2Q9UKJ5 165 aa17.92■□□□□ 0.46
AFF3-215ENST00000498090 C9orf84Q5VXU9 1444 aa17.91■□□□□ 0.46
AFF3-215ENST00000498090 COL17A1Q9UMD9 1497 aaPredicted RBP17.91■□□□□ 0.46
AFF3-215ENST00000498090 ADGRL2O95490 1459 aa17.9■□□□□ 0.46
AFF3-215ENST00000498090 MAST1Q9Y2H9 1570 aa17.89■□□□□ 0.45
AFF3-215ENST00000498090 ROCK1Q13464 1354 aa17.89■□□□□ 0.45
AFF3-215ENST00000498090 HFM1A2PYH4 1435 aa17.88■□□□□ 0.45
AFF3-215ENST00000498090 TEX14Q8IWB6 1497 aa17.88■□□□□ 0.45
AFF3-215ENST00000498090 ADGBQ8N7X0 1667 aa17.88■□□□□ 0.45
AFF3-215ENST00000498090 NAIPQ13075 1403 aa17.88■□□□□ 0.45
AFF3-215ENST00000498090 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
AFF3-215ENST00000498090 POGZQ7Z3K3 1410 aa17.87■□□□□ 0.45
AFF3-215ENST00000498090 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
AFF3-215ENST00000498090 AFAP1Q8N556 730 aa17.86■□□□□ 0.45
AFF3-215ENST00000498090 GCC2Q8IWJ2 1684 aa17.85■□□□□ 0.45
AFF3-215ENST00000498090 RRP7BPQ9NSQ0 103 aa17.85■□□□□ 0.45
AFF3-215ENST00000498090 ZFYVE16Q7Z3T8 1539 aa17.84■□□□□ 0.45
AFF3-215ENST00000498090 KDM5CP41229 1560 aa17.84■□□□□ 0.45
AFF3-215ENST00000498090 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
AFF3-215ENST00000498090 ZNF518AQ6AHZ1 1483 aa17.84■□□□□ 0.45
AFF3-215ENST00000498090 TSPY4P0CV99 314 aa17.83■□□□□ 0.45
AFF3-215ENST00000498090 TSPY10P0CW01 314 aa17.83■□□□□ 0.45
AFF3-215ENST00000498090 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.45
AFF3-215ENST00000498090 KDM6BO15054 1643 aa17.83■□□□□ 0.45
AFF3-215ENST00000498090 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.45
AFF3-215ENST00000498090 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.45
AFF3-215ENST00000498090 ANKRD30AQ9BXX3 1397 aa17.82■□□□□ 0.44
AFF3-215ENST00000498090 PLXNC1O60486 1568 aa17.81■□□□□ 0.44
AFF3-215ENST00000498090 RICTORQ6R327 1708 aa17.81■□□□□ 0.44
AFF3-215ENST00000498090 ATP7AQ04656 1500 aa17.8■□□□□ 0.44
AFF3-215ENST00000498090 SPAG9O60271 1321 aaKnown RBP17.8■□□□□ 0.44
AFF3-215ENST00000498090 RTEL1-TNFRSF6BF6WH68 1400 aa17.8■□□□□ 0.44
AFF3-215ENST00000498090 RAPGEF3O95398 923 aa17.79■□□□□ 0.44
AFF3-215ENST00000498090 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
AFF3-215ENST00000498090 HECW2Q9P2P5 1572 aa17.77■□□□□ 0.44
AFF3-215ENST00000498090 KIDINS220Q9ULH0 1771 aa17.77■□□□□ 0.44
AFF3-215ENST00000498090 MLH3Q9UHC1 1453 aa17.77■□□□□ 0.43
AFF3-215ENST00000498090 ZMYM4Q5VZL5 1548 aa17.76■□□□□ 0.43
AFF3-215ENST00000498090 ANKRD50Q9ULJ7 1429 aa17.74■□□□□ 0.43
AFF3-215ENST00000498090 ABCA6Q8N139 1617 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms