RNA–Protein interactions for RNA: ENST00000497980.5

STX1A-214, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 503 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-214ENST00000497980 SCAPERQ9BY12 1400 aa39.03■■■■□ 3.84
STX1A-214ENST00000497980 ARHGEF40Q8TER5 1519 aa39.03■■■■□ 3.84
STX1A-214ENST00000497980 MAGI2Q86UL8 1455 aa39.01■■■■□ 3.84
STX1A-214ENST00000497980 PREX2Q70Z35 1606 aa38.96■■■■□ 3.83
STX1A-214ENST00000497980 MTUS2Q5JR59 1369 aa38.94■■■■□ 3.82
STX1A-214ENST00000497980 LOC105371045A0A1W2PR82 267 aa38.93■■■■□ 3.82
STX1A-214ENST00000497980 ZFYVE16Q7Z3T8 1539 aa38.92■■■■□ 3.82
STX1A-214ENST00000497980 ZNF518AQ6AHZ1 1483 aa38.92■■■■□ 3.82
STX1A-214ENST00000497980 CDC42BPBQ9Y5S2 1711 aa38.86■■■■□ 3.81
STX1A-214ENST00000497980 EHBP1L1Q8N3D4 1523 aa38.86■■■■□ 3.81
STX1A-214ENST00000497980 VPS8Q8N3P4 1428 aa38.84■■■■□ 3.81
STX1A-214ENST00000497980 ABCC1P33527 1531 aa38.82■■■■□ 3.8
STX1A-214ENST00000497980 KDM5CP41229 1560 aa38.81■■■■□ 3.8
STX1A-214ENST00000497980 ARID4BQ4LE39 1312 aaPredicted RBP38.81■■■■□ 3.8
STX1A-214ENST00000497980 YEATS2Q9ULM3 1422 aa38.8■■■■□ 3.8
STX1A-214ENST00000497980 CDC42BPAQ5VT25 1732 aa38.8■■■■□ 3.8
STX1A-214ENST00000497980 GPATCH8Q9UKJ3 1502 aaKnown RBP38.79■■■■□ 3.8
STX1A-214ENST00000497980 CCNB3Q8WWL7 1395 aa38.78■■■■□ 3.8
STX1A-214ENST00000497980 BCORL1Q5H9F3 1711 aa38.73■■■■□ 3.79
STX1A-214ENST00000497980 ADAMTSL3P82987 1691 aa38.73■■■■□ 3.79
STX1A-214ENST00000497980 ATP10AO60312 1499 aa38.71■■■■□ 3.79
STX1A-214ENST00000497980 C9orf84Q5VXU9 1444 aa38.71■■■■□ 3.79
STX1A-214ENST00000497980 HECW2Q9P2P5 1572 aa38.7■■■■□ 3.79
STX1A-214ENST00000497980 AFAP1Q8N556 730 aa38.7■■■■□ 3.79
STX1A-214ENST00000497980 PLEKHH2Q8IVE3 1493 aa38.7■■■■□ 3.79
STX1A-214ENST00000497980 ITSN2Q9NZM3 1697 aa38.68■■■■□ 3.78
STX1A-214ENST00000497980 CFDP1Q9UEE9 299 aaPredicted RBP38.68■■■■□ 3.78
STX1A-214ENST00000497980 MLH3Q9UHC1 1453 aa38.67■■■■□ 3.78
STX1A-214ENST00000497980 TIAM1Q13009 1591 aa38.67■■■■□ 3.78
STX1A-214ENST00000497980 ARHGEF12Q9NZN5 1544 aa38.66■■■■□ 3.78
STX1A-214ENST00000497980 TRAPPC8Q9Y2L5 1435 aa38.65■■■■□ 3.78
STX1A-214ENST00000497980 SAMD9LQ8IVG5 1584 aa38.65■■■■□ 3.78
STX1A-214ENST00000497980 ZNF777Q9ULD5 760 aaPredicted RBP38.64■■■■□ 3.78
STX1A-214ENST00000497980 KIAA1107Q9UPP5 1409 aa38.63■■■■□ 3.78
STX1A-214ENST00000497980 MYT1LQ9UL68 1186 aa38.62■■■■□ 3.77
STX1A-214ENST00000497980 PTPRMP28827 1452 aa38.6■■■■□ 3.77
STX1A-214ENST00000497980 SYCP2Q9BX26 1530 aa38.6■■■■□ 3.77
STX1A-214ENST00000497980 MAP3K1Q13233 1512 aa38.59■■■■□ 3.77
STX1A-214ENST00000497980 SUPT6HQ7KZ85 1726 aaKnown RBP38.58■■■■□ 3.77
STX1A-214ENST00000497980 MADDQ8WXG6 1647 aa38.58■■■■□ 3.77
STX1A-214ENST00000497980 REREQ9P2R6 1566 aa38.57■■■■□ 3.76
STX1A-214ENST00000497980 DIP2CQ9Y2E4 1556 aa38.56■■■■□ 3.76
STX1A-214ENST00000497980 NCOA2Q15596 1464 aa38.54■■■■□ 3.76
STX1A-214ENST00000497980 LRRC9Q6ZRR7 1453 aa38.53■■■■□ 3.76
STX1A-214ENST00000497980 SIGLEC1Q9BZZ2 1709 aa38.51■■■■□ 3.76
STX1A-214ENST00000497980 ABCA6Q8N139 1617 aa38.49■■■■□ 3.75
STX1A-214ENST00000497980 SPAG9O60271 1321 aaKnown RBP38.46■■■■□ 3.75
STX1A-214ENST00000497980 HNRNPMP52272 730 aaKnown RBP eCLIP38.46■■■■□ 3.75
STX1A-214ENST00000497980 KIDINS220Q9ULH0 1771 aa38.44■■■■□ 3.74
STX1A-214ENST00000497980 AGLP35573 1532 aa38.43■■■■□ 3.74
STX1A-214ENST00000497980 RIMS1Q86UR5 1692 aaKnown RBP38.43■■■■□ 3.74
STX1A-214ENST00000497980 MLECQ14165 292 aa38.41■■■■□ 3.74
STX1A-214ENST00000497980 APLP2Q06481 763 aa38.4■■■■□ 3.74
STX1A-214ENST00000497980 ATP7AQ04656 1500 aa38.39■■■■□ 3.74
STX1A-214ENST00000497980 FER1L4A9Z1Z3 1794 aa38.37■■■■□ 3.73
STX1A-214ENST00000497980 INO80Q9ULG1 1556 aaPredicted RBP38.36■■■■□ 3.73
STX1A-214ENST00000497980 MBD5Q9P267 1494 aa38.35■■■■□ 3.73
STX1A-214ENST00000497980 ZNF644Q9H582 1327 aaPredicted RBP38.34■■■■□ 3.73
STX1A-214ENST00000497980 CAMSAP2Q08AD1 1489 aa38.33■■■■□ 3.73
STX1A-214ENST00000497980 RSPH4AQ5TD94 716 aa38.32■■■■□ 3.72
STX1A-214ENST00000497980 CCDC141Q6ZP82 1450 aa38.29■■■■□ 3.72
STX1A-214ENST00000497980 KANK4Q5T7N3 995 aaPredicted RBP38.29■■■■□ 3.72
STX1A-214ENST00000497980 RTEL1-TNFRSF6BF6WH68 1400 aa38.29■■■■□ 3.72
STX1A-214ENST00000497980 MIA2Q96PC5 1412 aa38.24■■■■□ 3.71
STX1A-214ENST00000497980 A2MP01023 1474 aa38.23■■■■□ 3.71
STX1A-214ENST00000497980 MYOM3Q5VTT5 1437 aa38.23■■■■□ 3.71
STX1A-214ENST00000497980 PLXNC1O60486 1568 aa38.22■■■■□ 3.71
STX1A-214ENST00000497980 ESF1Q9H501 851 aaKnown RBP38.21■■■■□ 3.71
STX1A-214ENST00000497980 CNTLNQ9NXG0 1405 aa38.2■■■■□ 3.71
STX1A-214ENST00000497980 ARHGEF5Q12774 1597 aa38.19■■■■□ 3.7
STX1A-214ENST00000497980 ADGBQ8N7X0 1667 aa38.17■■■■□ 3.7
STX1A-214ENST00000497980 LMTK3Q96Q04 1460 aa38.15■■■■□ 3.7
STX1A-214ENST00000497980 PLPPR3Q6T4P5 718 aa38.13■■■■□ 3.69
STX1A-214ENST00000497980 TSPY4P0CV99 314 aa38.11■■■■□ 3.69
STX1A-214ENST00000497980 TSPY10P0CW01 314 aa38.11■■■■□ 3.69
STX1A-214ENST00000497980 DHX29Q7Z478 1369 aaKnown RBP38.06■■■■□ 3.68
STX1A-214ENST00000497980 PPP6R1Q9UPN7 881 aa38.03■■■■□ 3.68
STX1A-214ENST00000497980 CEBPAP49715 358 aaPredicted RBP38■■■■□ 3.67
STX1A-214ENST00000497980 MAST1Q9Y2H9 1570 aa38■■■■□ 3.67
STX1A-214ENST00000497980 MROH2AA6NES4 1674 aa37.98■■■■□ 3.67
STX1A-214ENST00000497980 PREX1Q8TCU6 1659 aa37.98■■■■□ 3.67
STX1A-214ENST00000497980 C3P01024 1663 aa37.96■■■■□ 3.67
STX1A-214ENST00000497980 UHRF1BP1Q6BDS2 1440 aa37.95■■■■□ 3.67
STX1A-214ENST00000497980 FGD6Q6ZV73 1430 aa37.95■■■■□ 3.67
STX1A-214ENST00000497980 GGT6Q6P531 493 aa37.94■■■■□ 3.66
STX1A-214ENST00000497980 PTPN23Q9H3S7 1636 aa37.93■■■■□ 3.66
STX1A-214ENST00000497980 FAM135AQ9P2D6 1515 aa37.92■■■■□ 3.66
STX1A-214ENST00000497980 NPATQ14207 1427 aa37.91■■■■□ 3.66
STX1A-214ENST00000497980 SHANK2Q9UPX8 1470 aa37.9■■■■□ 3.66
STX1A-214ENST00000497980 SETD1BQ9UPS6 1966 aaKnown RBP37.9■■■■□ 3.66
STX1A-214ENST00000497980 ZMYM3Q14202 1370 aa37.9■■■■□ 3.66
STX1A-214ENST00000497980 TCOF1Q13428 1488 aaKnown RBP37.9■■■■□ 3.66
STX1A-214ENST00000497980 KIF3BO15066 747 aa37.86■■■■□ 3.65
STX1A-214ENST00000497980 HSPA2P54652 639 aa37.84■■■■□ 3.65
STX1A-214ENST00000497980 CLTCQ00610 1675 aaKnown RBP37.84■■■■□ 3.65
STX1A-214ENST00000497980 ABCC5O15440 1437 aa37.79■■■■□ 3.64
STX1A-214ENST00000497980 KDM5DQ9BY66 1539 aa37.79■■■■□ 3.64
STX1A-214ENST00000497980 DAPK1P53355 1430 aa37.78■■■■□ 3.64
STX1A-214ENST00000497980 DNMT1P26358 1616 aaKnown RBP37.78■■■■□ 3.64
STX1A-214ENST00000497980 CROCC2H7BZ55 1655 aa37.78■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms