RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 KIF14Q15058 1648 aa19.14■□□□□ 0.66
NUDCD3-211ENST00000497978 MYO5CQ9NQX4 1742 aa19.14■□□□□ 0.66
NUDCD3-211ENST00000497978 SCAPERQ9BY12 1400 aa19.14■□□□□ 0.65
NUDCD3-211ENST00000497978 ZMYM4Q5VZL5 1548 aa19.14■□□□□ 0.65
NUDCD3-211ENST00000497978 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.65
NUDCD3-211ENST00000497978 PTPRMP28827 1452 aa19.12■□□□□ 0.65
NUDCD3-211ENST00000497978 MAGI2Q86UL8 1455 aa19.12■□□□□ 0.65
NUDCD3-211ENST00000497978 ZFYVE16Q7Z3T8 1539 aa19.11■□□□□ 0.65
NUDCD3-211ENST00000497978 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
NUDCD3-211ENST00000497978 CCDC18Q5T9S5 1454 aa19.1■□□□□ 0.65
NUDCD3-211ENST00000497978 POGZQ7Z3K3 1410 aa19.1■□□□□ 0.65
NUDCD3-211ENST00000497978 LRRIQ1Q96JM4 1722 aa19.1■□□□□ 0.65
NUDCD3-211ENST00000497978 PCF11O94913 1555 aaKnown RBP19.08■□□□□ 0.65
NUDCD3-211ENST00000497978 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
NUDCD3-211ENST00000497978 YEATS2Q9ULM3 1422 aa19.08■□□□□ 0.64
NUDCD3-211ENST00000497978 MADDQ8WXG6 1647 aa19.07■□□□□ 0.64
NUDCD3-211ENST00000497978 FYCO1Q9BQS8 1478 aa19.04■□□□□ 0.64
NUDCD3-211ENST00000497978 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
NUDCD3-211ENST00000497978 RIMS1Q86UR5 1692 aaKnown RBP19.02■□□□□ 0.64
NUDCD3-211ENST00000497978 ATP10AO60312 1499 aa19.02■□□□□ 0.63
NUDCD3-211ENST00000497978 MYT1LQ9UL68 1186 aa19.01■□□□□ 0.63
NUDCD3-211ENST00000497978 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
NUDCD3-211ENST00000497978 MLECQ14165 292 aa18.99■□□□□ 0.63
NUDCD3-211ENST00000497978 CDC42BPBQ9Y5S2 1711 aa18.99■□□□□ 0.63
NUDCD3-211ENST00000497978 AFAP1Q8N556 730 aa18.98■□□□□ 0.63
NUDCD3-211ENST00000497978 PREX2Q70Z35 1606 aa18.98■□□□□ 0.63
NUDCD3-211ENST00000497978 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
NUDCD3-211ENST00000497978 KDM5CP41229 1560 aa18.97■□□□□ 0.63
NUDCD3-211ENST00000497978 ILDR1Q86SU0 546 aaPredicted RBP18.94■□□□□ 0.62
NUDCD3-211ENST00000497978 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
NUDCD3-211ENST00000497978 ABCC1P33527 1531 aa18.93■□□□□ 0.62
NUDCD3-211ENST00000497978 CDC42BPAQ5VT25 1732 aa18.92■□□□□ 0.62
NUDCD3-211ENST00000497978 LMTK3Q96Q04 1460 aa18.91■□□□□ 0.62
NUDCD3-211ENST00000497978 MLH3Q9UHC1 1453 aa18.9■□□□□ 0.62
NUDCD3-211ENST00000497978 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
NUDCD3-211ENST00000497978 ITSN2Q9NZM3 1697 aa18.9■□□□□ 0.62
NUDCD3-211ENST00000497978 ZNF777Q9ULD5 760 aaPredicted RBP18.9■□□□□ 0.62
NUDCD3-211ENST00000497978 TRAPPC8Q9Y2L5 1435 aa18.9■□□□□ 0.62
NUDCD3-211ENST00000497978 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.61
NUDCD3-211ENST00000497978 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
NUDCD3-211ENST00000497978 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
NUDCD3-211ENST00000497978 GPATCH8Q9UKJ3 1502 aaKnown RBP18.86■□□□□ 0.61
NUDCD3-211ENST00000497978 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
NUDCD3-211ENST00000497978 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
NUDCD3-211ENST00000497978 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
NUDCD3-211ENST00000497978 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
NUDCD3-211ENST00000497978 SAMD9LQ8IVG5 1584 aa18.84■□□□□ 0.61
NUDCD3-211ENST00000497978 HSPA2P54652 639 aa18.83■□□□□ 0.6
NUDCD3-211ENST00000497978 ESF1Q9H501 851 aaKnown RBP18.83■□□□□ 0.6
NUDCD3-211ENST00000497978 PLEKHH2Q8IVE3 1493 aa18.82■□□□□ 0.6
NUDCD3-211ENST00000497978 KIDINS220Q9ULH0 1771 aa18.81■□□□□ 0.6
NUDCD3-211ENST00000497978 AGLP35573 1532 aa18.81■□□□□ 0.6
NUDCD3-211ENST00000497978 SYCP2Q9BX26 1530 aa18.81■□□□□ 0.6
NUDCD3-211ENST00000497978 HNRNPMP52272 730 aaKnown RBP eCLIP18.81■□□□□ 0.64e-6■■■■□ 23.6
NUDCD3-211ENST00000497978 SPAG9O60271 1321 aaKnown RBP18.8■□□□□ 0.6
NUDCD3-211ENST00000497978 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
NUDCD3-211ENST00000497978 KIAA1107Q9UPP5 1409 aa18.8■□□□□ 0.6
NUDCD3-211ENST00000497978 EHBP1L1Q8N3D4 1523 aa18.79■□□□□ 0.6
NUDCD3-211ENST00000497978 PREX1Q8TCU6 1659 aa18.77■□□□□ 0.6
NUDCD3-211ENST00000497978 ATP7AQ04656 1500 aa18.74■□□□□ 0.59
NUDCD3-211ENST00000497978 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
NUDCD3-211ENST00000497978 SETD1BQ9UPS6 1966 aaKnown RBP18.73■□□□□ 0.59
NUDCD3-211ENST00000497978 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
NUDCD3-211ENST00000497978 FBXO41Q8TF61 875 aa18.73■□□□□ 0.59
NUDCD3-211ENST00000497978 UHRF1BP1Q6BDS2 1440 aa18.73■□□□□ 0.59
NUDCD3-211ENST00000497978 C3P01024 1663 aa18.71■□□□□ 0.59
NUDCD3-211ENST00000497978 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
NUDCD3-211ENST00000497978 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
NUDCD3-211ENST00000497978 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
NUDCD3-211ENST00000497978 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
NUDCD3-211ENST00000497978 A2MP01023 1474 aa18.69■□□□□ 0.58
NUDCD3-211ENST00000497978 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
NUDCD3-211ENST00000497978 NCOA2Q15596 1464 aa18.66■□□□□ 0.58
NUDCD3-211ENST00000497978 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
NUDCD3-211ENST00000497978 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
NUDCD3-211ENST00000497978 PLXNC1O60486 1568 aa18.65■□□□□ 0.58
NUDCD3-211ENST00000497978 ADGBQ8N7X0 1667 aa18.65■□□□□ 0.58
NUDCD3-211ENST00000497978 MROH2AA6NES4 1674 aa18.64■□□□□ 0.57
NUDCD3-211ENST00000497978 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
NUDCD3-211ENST00000497978 MSH5O43196 834 aa18.63■□□□□ 0.57
NUDCD3-211ENST00000497978 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
NUDCD3-211ENST00000497978 GGT6Q6P531 493 aa18.63■□□□□ 0.57
NUDCD3-211ENST00000497978 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
NUDCD3-211ENST00000497978 NPATQ14207 1427 aa18.62■□□□□ 0.57
NUDCD3-211ENST00000497978 CAMSAP2Q08AD1 1489 aa18.61■□□□□ 0.57
NUDCD3-211ENST00000497978 CCDC141Q6ZP82 1450 aa18.6■□□□□ 0.57
NUDCD3-211ENST00000497978 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
NUDCD3-211ENST00000497978 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
NUDCD3-211ENST00000497978 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
NUDCD3-211ENST00000497978 CERKQ8TCT0 537 aa18.59■□□□□ 0.57
NUDCD3-211ENST00000497978 DHX29Q7Z478 1369 aaKnown RBP18.58■□□□□ 0.57
NUDCD3-211ENST00000497978 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
NUDCD3-211ENST00000497978 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
NUDCD3-211ENST00000497978 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
NUDCD3-211ENST00000497978 PTPRTO14522 1441 aa18.54■□□□□ 0.56
NUDCD3-211ENST00000497978 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
NUDCD3-211ENST00000497978 KIF3BO15066 747 aa18.53■□□□□ 0.56
NUDCD3-211ENST00000497978 PTPRKQ15262 1439 aa18.52■□□□□ 0.56
NUDCD3-211ENST00000497978 NCOA1Q15788 1441 aa18.52■□□□□ 0.56
NUDCD3-211ENST00000497978 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms